RNA–Protein interactions for RNA: ENST00000553353.5

FOXN3-203, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-203ENST00000553353 TRIM22Q8IYM9 498 aa6.03□□□□□ -1.44
FOXN3-203ENST00000553353 MBIPQ9NS73 344 aa6.03□□□□□ -1.44
FOXN3-203ENST00000553353 ATP1B4Q9UN42 357 aaPredicted RBP6.03□□□□□ -1.44
FOXN3-203ENST00000553353 PROCA1Q8NCQ7 364 aaPredicted RBP6.02□□□□□ -1.45
FOXN3-203ENST00000553353 LRRC4BQ9NT99 713 aa6.02□□□□□ -1.45
FOXN3-203ENST00000553353 NUP153P49790 1475 aaKnown RBP6.02□□□□□ -1.45
FOXN3-203ENST00000553353 GOLGA3Q08378 1498 aa6.02□□□□□ -1.45
FOXN3-203ENST00000553353 ATP5J2-PTCD1G3V325 749 aa6.01□□□□□ -1.45
FOXN3-203ENST00000553353 H7C1W4 665 aa6.01□□□□□ -1.45
FOXN3-203ENST00000553353 FBXO31Q5XUX0 539 aaPredicted RBP6.01□□□□□ -1.45
FOXN3-203ENST00000553353 PRICKLE2Q7Z3G6 844 aa6.01□□□□□ -1.45
FOXN3-203ENST00000553353 BEND7Q8N7W2 519 aaPredicted RBP6.01□□□□□ -1.45
FOXN3-203ENST00000553353 EPS8L1Q8TE68 723 aa6.01□□□□□ -1.45
FOXN3-203ENST00000553353 CUEDC1Q9NWM3 386 aaPredicted RBP6.01□□□□□ -1.45
FOXN3-203ENST00000553353 AGLP35573 1532 aa6□□□□□ -1.45
FOXN3-203ENST00000553353 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6□□□□□ -1.45
FOXN3-203ENST00000553353 USP17L8P0C7I0 530 aa6□□□□□ -1.45
FOXN3-203ENST00000553353 PODNQ7Z5L7 613 aa6□□□□□ -1.45
FOXN3-203ENST00000553353 ZNF837Q96EG3 531 aaPredicted RBP6□□□□□ -1.45
FOXN3-203ENST00000553353 DYRK1BQ9Y463 629 aa6□□□□□ -1.45
FOXN3-203ENST00000553353 SHANK2Q9UPX8 1470 aa6□□□□□ -1.45
FOXN3-203ENST00000553353 PLCH2O75038 1416 aa5.99□□□□□ -1.45
FOXN3-203ENST00000553353 PTPRKQ15262 1439 aa5.99□□□□□ -1.45
FOXN3-203ENST00000553353 CPS1P31327 1500 aa5.99□□□□□ -1.45
FOXN3-203ENST00000553353 REREQ9P2R6 1566 aa5.99□□□□□ -1.45
FOXN3-203ENST00000553353 BCRP11274 1271 aa5.99□□□□□ -1.45
FOXN3-203ENST00000553353 AFAP1Q8N556 730 aa5.99□□□□□ -1.45
FOXN3-203ENST00000553353 KDM4CQ9H3R0 1056 aa5.99□□□□□ -1.45
FOXN3-203ENST00000553353 HMX1Q9NP08 348 aaPredicted RBP5.99□□□□□ -1.45
FOXN3-203ENST00000553353 CYLDQ9NQC7 956 aa5.99□□□□□ -1.45
FOXN3-203ENST00000553353 NSFL1CQ9UNZ2 370 aaKnown RBP5.99□□□□□ -1.45
FOXN3-203ENST00000553353 ZMYM3Q14202 1370 aa5.98□□□□□ -1.45
FOXN3-203ENST00000553353 MSTNO14793 375 aa5.98□□□□□ -1.45
FOXN3-203ENST00000553353 RHOQP17081 205 aa5.98□□□□□ -1.45
FOXN3-203ENST00000553353 DBN1Q16643 649 aa5.98□□□□□ -1.45
FOXN3-203ENST00000553353 WDR44Q5JSH3 913 aa5.98□□□□□ -1.45
FOXN3-203ENST00000553353 RNF20Q5VTR2 975 aa5.98□□□□□ -1.45
FOXN3-203ENST00000553353 ZNF592Q92610 1267 aa5.98□□□□□ -1.45
FOXN3-203ENST00000553353 TRERF1Q96PN7 1200 aa5.98□□□□□ -1.45
FOXN3-203ENST00000553353 FAM117AQ9C073 453 aa5.98□□□□□ -1.45
FOXN3-203ENST00000553353 ZBBXA8MT70 800 aa5.97□□□□□ -1.45
FOXN3-203ENST00000553353 MCCD1P59942 119 aaPredicted RBP5.97□□□□□ -1.45
FOXN3-203ENST00000553353 RIPOR1Q6ZS17 1223 aa5.97□□□□□ -1.45
FOXN3-203ENST00000553353 NEDD1Q8NHV4 660 aa5.97□□□□□ -1.45
FOXN3-203ENST00000553353 DCAF5Q96JK2 942 aa5.97□□□□□ -1.45
FOXN3-203ENST00000553353 CNTLNQ9NXG0 1405 aa5.97□□□□□ -1.45
FOXN3-203ENST00000553353 C3P01024 1663 aa5.97□□□□□ -1.45
FOXN3-203ENST00000553353 KDM5CP41229 1560 aa5.97□□□□□ -1.45
FOXN3-203ENST00000553353 VWDEQ8N2E2 1590 aa5.97□□□□□ -1.45
FOXN3-203ENST00000553353 CNTNAP5Q8WYK1 1306 aa5.97□□□□□ -1.45
FOXN3-203ENST00000553353 SETD1BQ9UPS6 1966 aaKnown RBP5.97□□□□□ -1.45
FOXN3-203ENST00000553353 A0A1W2PRU2 124 aa5.96□□□□□ -1.46
FOXN3-203ENST00000553353 MEN1O00255 615 aa5.96□□□□□ -1.46
FOXN3-203ENST00000553353 GIGYF1O75420 1035 aaPredicted RBP5.96□□□□□ -1.46
FOXN3-203ENST00000553353 RFC5P40937 340 aa5.96□□□□□ -1.46
FOXN3-203ENST00000553353 ERVK-9P63128 1117 aa5.96□□□□□ -1.46
FOXN3-203ENST00000553353 PLA2G4EQ3MJ16 856 aa5.96□□□□□ -1.46
FOXN3-203ENST00000553353 TMEM259Q4ZIN3 620 aa5.96□□□□□ -1.46
FOXN3-203ENST00000553353 SLC27A3Q5K4L6 730 aa5.96□□□□□ -1.46
FOXN3-203ENST00000553353 CC2D2BQ6DHV5 1058 aa5.96□□□□□ -1.46
FOXN3-203ENST00000553353 NLRP3Q96P20 1036 aa5.96□□□□□ -1.46
FOXN3-203ENST00000553353 NEURL4Q96JN8 1562 aa5.96□□□□□ -1.46
FOXN3-203ENST00000553353 DIP2CQ9Y2E4 1556 aa5.96□□□□□ -1.46
FOXN3-203ENST00000553353 MLH3Q9UHC1 1453 aa5.96□□□□□ -1.46
FOXN3-203ENST00000553353 LRRC7Q96NW7 1537 aa5.95□□□□□ -1.46
FOXN3-203ENST00000553353 SPATA31C2B4DYI2 1134 aa5.95□□□□□ -1.46
FOXN3-203ENST00000553353 GPR25O00155 361 aa5.95□□□□□ -1.46
FOXN3-203ENST00000553353 MX2P20592 715 aa5.95□□□□□ -1.46
FOXN3-203ENST00000553353 ACDQ96AP0 544 aa5.95□□□□□ -1.46
FOXN3-203ENST00000553353 GRIP2Q9C0E4 1043 aa5.95□□□□□ -1.46
FOXN3-203ENST00000553353 GOPCQ9HD26 462 aa5.95□□□□□ -1.46
FOXN3-203ENST00000553353 ZNF518AQ6AHZ1 1483 aa5.95□□□□□ -1.46
FOXN3-203ENST00000553353 PRXQ9BXM0 1461 aa5.95□□□□□ -1.46
FOXN3-203ENST00000553353 FAM135BQ49AJ0 1406 aa5.94□□□□□ -1.46
FOXN3-203ENST00000553353 PLEKHD1A6NEE1 506 aa5.94□□□□□ -1.46
FOXN3-203ENST00000553353 ADAM23O75077 832 aa5.94□□□□□ -1.46
FOXN3-203ENST00000553353 POU4F2Q12837 409 aa5.94□□□□□ -1.46
FOXN3-203ENST00000553353 CLN3Q13286 438 aa5.94□□□□□ -1.46
FOXN3-203ENST00000553353 NBPF10Q6P3W6 841 aaKnown RBP5.94□□□□□ -1.46
FOXN3-203ENST00000553353 CYP2U1Q7Z449 544 aa5.94□□□□□ -1.46
FOXN3-203ENST00000553353 NBPF15Q8N660 670 aa5.94□□□□□ -1.46
FOXN3-203ENST00000553353 GTPBP3Q969Y2 492 aaKnown RBP5.94□□□□□ -1.46
FOXN3-203ENST00000553353 GAS2L1Q99501 681 aaPredicted RBP5.94□□□□□ -1.46
FOXN3-203ENST00000553353 SPOCK3Q9BQ16 436 aa5.94□□□□□ -1.46
FOXN3-203ENST00000553353 TRIM34Q9BYJ4 488 aa5.94□□□□□ -1.46
FOXN3-203ENST00000553353 GPBP1L1Q9HC44 474 aaPredicted RBP5.94□□□□□ -1.46
FOXN3-203ENST00000553353 PCDHB9Q9Y5E1 797 aa5.94□□□□□ -1.46
FOXN3-203ENST00000553353 OIP5O43482 229 aa5.93□□□□□ -1.46
FOXN3-203ENST00000553353 SLC24A1O60721 1099 aa5.93□□□□□ -1.46
FOXN3-203ENST00000553353 F11P03951 625 aa5.93□□□□□ -1.46
FOXN3-203ENST00000553353 MAP2K3P46734 347 aa5.93□□□□□ -1.46
FOXN3-203ENST00000553353 ALYREFQ86V81 257 aaKnown RBP5.93□□□□□ -1.46
FOXN3-203ENST00000553353 CEP170BQ9Y4F5 1589 aaPredicted RBP5.93□□□□□ -1.46
FOXN3-203ENST00000553353 MED14O60244 1454 aa5.92□□□□□ -1.46
FOXN3-203ENST00000553353 FBXO45P0C2W1 286 aa5.92□□□□□ -1.46
FOXN3-203ENST00000553353 EFCAB2Q5VUJ9 269 aa5.92□□□□□ -1.46
FOXN3-203ENST00000553353 TAS1R3Q7RTX0 852 aa5.92□□□□□ -1.46
FOXN3-203ENST00000553353 CFHR5Q9BXR6 569 aa5.92□□□□□ -1.46
FOXN3-203ENST00000553353 NUCKS1Q9H1E3 243 aaKnown RBP5.92□□□□□ -1.46
FOXN3-203ENST00000553353 ESF1Q9H501 851 aaKnown RBP5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms