RNA–Protein interactions for RNA: ENST00000553300.5

HNRNPC-205, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-205ENST00000553300 PARP3Q9Y6F1 533 aa17.41■□□□□ 0.38
HNRNPC-205ENST00000553300 TAF7Q15545 349 aaPredicted RBP17.4■□□□□ 0.38
HNRNPC-205ENST00000553300 ZBTB1Q9Y2K1 713 aa17.4■□□□□ 0.38
HNRNPC-205ENST00000553300 CHD4Q14839 1912 aa17.4■□□□□ 0.38
HNRNPC-205ENST00000553300 NFE2L2Q16236 605 aa17.4■□□□□ 0.38
HNRNPC-205ENST00000553300 PELP1Q8IZL8 1130 aaKnown RBP17.4■□□□□ 0.38
HNRNPC-205ENST00000553300 NARFQ9UHQ1 456 aa17.4■□□□□ 0.38
HNRNPC-205ENST00000553300 A0A087WZG4 1122 aa17.39■□□□□ 0.37
HNRNPC-205ENST00000553300 PNISRQ8TF01 805 aaKnown RBP17.39■□□□□ 0.37
HNRNPC-205ENST00000553300 COL15A1P39059 1388 aa17.39■□□□□ 0.37
HNRNPC-205ENST00000553300 CANXP27824 592 aaKnown RBP17.38■□□□□ 0.37
HNRNPC-205ENST00000553300 EIF5P55010 431 aaKnown RBP17.38■□□□□ 0.37
HNRNPC-205ENST00000553300 TGFB2P61812 414 aa17.38■□□□□ 0.37
HNRNPC-205ENST00000553300 DCTN1Q14203 1278 aa17.38■□□□□ 0.37
HNRNPC-205ENST00000553300 FKBP8Q14318 412 aa17.38■□□□□ 0.37
HNRNPC-205ENST00000553300 NPM2Q86SE8 214 aaKnown RBP17.38■□□□□ 0.37
HNRNPC-205ENST00000553300 PRKRIP1Q9H875 184 aaPredicted RBP17.38■□□□□ 0.37
HNRNPC-205ENST00000553300 SRP68Q9UHB9 627 aaKnown RBP17.38■□□□□ 0.37
HNRNPC-205ENST00000553300 SNRPA1P09661 255 aaKnown RBP17.37■□□□□ 0.37
HNRNPC-205ENST00000553300 IL6STP40189 918 aaPredicted RBP17.37■□□□□ 0.37
HNRNPC-205ENST00000553300 DLG5Q8TDM6 1919 aa17.36■□□□□ 0.37
HNRNPC-205ENST00000553300 KCNQ3O43525 872 aa17.36■□□□□ 0.37
HNRNPC-205ENST00000553300 TM4SF1P30408 202 aa17.36■□□□□ 0.37
HNRNPC-205ENST00000553300 USPL1Q5W0Q7 1092 aa17.36■□□□□ 0.37
HNRNPC-205ENST00000553300 YBX3P16989 372 aaKnown RBP eCLIP17.35■□□□□ 0.37
HNRNPC-205ENST00000553300 WDR43Q15061 677 aaKnown RBP eCLIP17.35■□□□□ 0.37
HNRNPC-205ENST00000553300 KIF13BQ9NQT8 1826 aa17.35■□□□□ 0.37
HNRNPC-205ENST00000553300 LMOD3Q0VAK6 560 aa17.34■□□□□ 0.37
HNRNPC-205ENST00000553300 C10orf71Q711Q0 1435 aa17.34■□□□□ 0.37
HNRNPC-205ENST00000553300 USP16Q9Y5T5 823 aa17.33■□□□□ 0.36
HNRNPC-205ENST00000553300 POLRMTO00411 1230 aaKnown RBP17.32■□□□□ 0.36
HNRNPC-205ENST00000553300 A1BGP04217 495 aa17.32■□□□□ 0.36
HNRNPC-205ENST00000553300 RIPK4P57078 832 aa17.32■□□□□ 0.36
HNRNPC-205ENST00000553300 DDR1Q08345 913 aa17.31■□□□□ 0.36
HNRNPC-205ENST00000553300 BCL2L12Q9HB09 334 aa17.31■□□□□ 0.36
HNRNPC-205ENST00000553300 BABAM1Q9NWV8 329 aa17.31■□□□□ 0.36
HNRNPC-205ENST00000553300 TMPOP42166 694 aaKnown RBP17.3■□□□□ 0.36
HNRNPC-205ENST00000553300 NFIXQ14938 502 aa17.3■□□□□ 0.36
HNRNPC-205ENST00000553300 RUNDC1Q96C34 613 aa17.3■□□□□ 0.36
HNRNPC-205ENST00000553300 MIS18AQ9NYP9 233 aa17.3■□□□□ 0.36
HNRNPC-205ENST00000553300 ZNF330Q9Y3S2 320 aaPredicted RBP17.3■□□□□ 0.36
HNRNPC-205ENST00000553300 PXDNLA1KZ92 1463 aa17.3■□□□□ 0.36
HNRNPC-205ENST00000553300 ZNF316A6NFI3 1004 aaPredicted RBP17.29■□□□□ 0.36
HNRNPC-205ENST00000553300 A0A0G2JLW4 131 aa17.28■□□□□ 0.36
HNRNPC-205ENST00000553300 ADAMTS8Q9UP79 889 aa17.28■□□□□ 0.36
HNRNPC-205ENST00000553300 TBC1D2BQ9UPU7 963 aa17.28■□□□□ 0.36
HNRNPC-205ENST00000553300 PRAMEF22A3QJZ6 481 aa17.28■□□□□ 0.36
HNRNPC-205ENST00000553300 RGL2O15211 777 aa17.28■□□□□ 0.36
HNRNPC-205ENST00000553300 GIGYF1O75420 1035 aaPredicted RBP17.28■□□□□ 0.36
HNRNPC-205ENST00000553300 SERPINB2P05120 415 aa17.28■□□□□ 0.36
HNRNPC-205ENST00000553300 DPEP1P16444 411 aa17.28■□□□□ 0.36
HNRNPC-205ENST00000553300 EIF4A1P60842 406 aaKnown RBP17.28■□□□□ 0.36
HNRNPC-205ENST00000553300 ZNF784Q8NCA9 323 aaPredicted RBP17.28■□□□□ 0.36
HNRNPC-205ENST00000553300 THUMPD2Q9BTF0 503 aaKnown RBP17.28■□□□□ 0.36
HNRNPC-205ENST00000553300 KDM3BQ7LBC6 1761 aa17.27■□□□□ 0.36
HNRNPC-205ENST00000553300 CLEC4GQ6UXB4 293 aa17.27■□□□□ 0.35
HNRNPC-205ENST00000553300 DZIP3Q86Y13 1208 aaKnown RBP17.27■□□□□ 0.35
HNRNPC-205ENST00000553300 PIM2Q9P1W9 311 aa17.27■□□□□ 0.35
HNRNPC-205ENST00000553300 N4BP2Q86UW6 1770 aaPredicted RBP17.26■□□□□ 0.35
HNRNPC-205ENST00000553300 KIAA1551Q9HCM1 1747 aa17.26■□□□□ 0.35
HNRNPC-205ENST00000553300 CCDC146Q8IYE0 955 aa17.26■□□□□ 0.35
HNRNPC-205ENST00000553300 TSPYL4Q9UJ04 414 aa17.26■□□□□ 0.35
HNRNPC-205ENST00000553300 ZNF652Q9Y2D9 606 aa17.26■□□□□ 0.35
HNRNPC-205ENST00000553300 CAMTA2O94983 1202 aa17.25■□□□□ 0.35
HNRNPC-205ENST00000553300 SETDB2Q96T68 719 aa17.25■□□□□ 0.35
HNRNPC-205ENST00000553300 PDZRN3Q9UPQ7 1066 aa17.25■□□□□ 0.35
HNRNPC-205ENST00000553300 BCS1LQ9Y276 419 aa17.25■□□□□ 0.35
HNRNPC-205ENST00000553300 NRXN2Q9P2S2 1712 aa17.24■□□□□ 0.35
HNRNPC-205ENST00000553300 CARMIL3Q8ND23 1372 aa17.24■□□□□ 0.35
HNRNPC-205ENST00000553300 AFDNP55196 1824 aaKnown RBP17.24■□□□□ 0.35
HNRNPC-205ENST00000553300 KCNA3P22001 575 aa17.24■□□□□ 0.35
HNRNPC-205ENST00000553300 NEUROD2Q15784 382 aa17.24■□□□□ 0.35
HNRNPC-205ENST00000553300 TBC1D9BQ66K14 1250 aa17.24■□□□□ 0.35
HNRNPC-205ENST00000553300 BICDL1Q6ZP65 573 aa17.24■□□□□ 0.35
HNRNPC-205ENST00000553300 WWC3Q9ULE0 1092 aa17.24■□□□□ 0.35
HNRNPC-205ENST00000553300 SCN7AQ01118 1682 aa17.24■□□□□ 0.35
HNRNPC-205ENST00000553300 NBPF26B4DH59 902 aa17.23■□□□□ 0.35
HNRNPC-205ENST00000553300 DALRD3Q5D0E6 543 aaKnown RBP17.23■□□□□ 0.35
HNRNPC-205ENST00000553300 NBPF10Q6P3W6 841 aaKnown RBP17.23■□□□□ 0.35
HNRNPC-205ENST00000553300 NBPF15Q8N660 670 aa17.23■□□□□ 0.35
HNRNPC-205ENST00000553300 RRP7AQ9Y3A4 280 aaKnown RBP17.23■□□□□ 0.35
HNRNPC-205ENST00000553300 LAMB4A4D0S4 1761 aa17.22■□□□□ 0.35
HNRNPC-205ENST00000553300 ERBB4Q15303 1308 aa17.22■□□□□ 0.35
HNRNPC-205ENST00000553300 BRCA1P38398 1863 aaKnown RBP17.22■□□□□ 0.35
HNRNPC-205ENST00000553300 PIP4K2AP48426 406 aaPredicted RBP17.22■□□□□ 0.35
HNRNPC-205ENST00000553300 TRIM35Q9UPQ4 493 aa17.21■□□□□ 0.35
HNRNPC-205ENST00000553300 H0YIN7 160 aa17.2■□□□□ 0.34
HNRNPC-205ENST00000553300 CHL1O00533 1208 aa17.2■□□□□ 0.34
HNRNPC-205ENST00000553300 PDE6BP35913 854 aa17.2■□□□□ 0.34
HNRNPC-205ENST00000553300 BRIP1Q9BX63 1249 aa17.2■□□□□ 0.34
HNRNPC-205ENST00000553300 BCORQ6W2J9 1755 aa17.2■□□□□ 0.34
HNRNPC-205ENST00000553300 ARFGEF1Q9Y6D6 1849 aa17.19■□□□□ 0.34
HNRNPC-205ENST00000553300 NPHP1O15259 732 aa17.19■□□□□ 0.34
HNRNPC-205ENST00000553300 ANP32CO43423 234 aa17.19■□□□□ 0.34
HNRNPC-205ENST00000553300 CHRNA5P30532 468 aa17.19■□□□□ 0.34
HNRNPC-205ENST00000553300 ERVV-1B6SEH8 477 aa17.18■□□□□ 0.34
HNRNPC-205ENST00000553300 ST5P78524 1137 aa17.18■□□□□ 0.34
HNRNPC-205ENST00000553300 CALD1Q05682 793 aaKnown RBP17.18■□□□□ 0.34
HNRNPC-205ENST00000553300 PRR5LQ6MZQ0 368 aa17.18■□□□□ 0.34
HNRNPC-205ENST00000553300 ARHGAP27Q6ZUM4 889 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms