RNA–Protein interactions for RNA: ENST00000553217.5

TMEM106C-221, Transcript of transmembrane protein 106C, humanhuman

TSL 3

Gene TMEM106C, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-221ENST00000553217 SMC5Q8IY18 1101 aa6.91□□□□□ -1.3
TMEM106C-221ENST00000553217 TRMT2AQ8IZ69 625 aaKnown RBP6.91□□□□□ -1.3
TMEM106C-221ENST00000553217 FEZ1Q99689 392 aa6.91□□□□□ -1.3
TMEM106C-221ENST00000553217 POLR3GLQ9BT43 218 aa6.91□□□□□ -1.3
TMEM106C-221ENST00000553217 CCDC94Q9BW85 323 aaPredicted RBP6.91□□□□□ -1.3
TMEM106C-221ENST00000553217 RRAGDQ9NQL2 400 aaPredicted RBP6.91□□□□□ -1.3
TMEM106C-221ENST00000553217 DIAPH3Q9NSV4 1193 aa6.91□□□□□ -1.3
TMEM106C-221ENST00000553217 WWC3Q9ULE0 1092 aa6.91□□□□□ -1.3
TMEM106C-221ENST00000553217 KNSTRNQ9Y448 316 aa6.91□□□□□ -1.3
TMEM106C-221ENST00000553217 ZNF521Q96K83 1311 aa6.91□□□□□ -1.3
TMEM106C-221ENST00000553217 AMPHP49418 695 aa6.9□□□□□ -1.3
TMEM106C-221ENST00000553217 PRIM1P49642 420 aaKnown RBP6.9□□□□□ -1.3
TMEM106C-221ENST00000553217 KIAA2012Q0VF49 1180 aa6.9□□□□□ -1.3
TMEM106C-221ENST00000553217 DHX8Q14562 1220 aaKnown RBP6.9□□□□□ -1.3
TMEM106C-221ENST00000553217 DUSP27Q5VZP5 1158 aa6.9□□□□□ -1.3
TMEM106C-221ENST00000553217 IP6K1Q92551 441 aa6.9□□□□□ -1.3
TMEM106C-221ENST00000553217 COG3Q96JB2 828 aa6.9□□□□□ -1.3
TMEM106C-221ENST00000553217 SYT17Q9BSW7 474 aa6.9□□□□□ -1.3
TMEM106C-221ENST00000553217 CDCA7Q9BWT1 371 aaPredicted RBP6.9□□□□□ -1.3
TMEM106C-221ENST00000553217 KIF3AQ9Y496 699 aa6.9□□□□□ -1.3
TMEM106C-221ENST00000553217 NSD2O96028 1365 aa6.9□□□□□ -1.31
TMEM106C-221ENST00000553217 BCL9O00512 1426 aa6.9□□□□□ -1.31
TMEM106C-221ENST00000553217 KIF20BQ96Q89 1820 aa6.9□□□□□ -1.31
TMEM106C-221ENST00000553217 ZNF445P59923 1031 aa6.89□□□□□ -1.31
TMEM106C-221ENST00000553217 SLC20A2Q08357 652 aa6.89□□□□□ -1.31
TMEM106C-221ENST00000553217 SLFN5Q08AF3 891 aa6.89□□□□□ -1.31
TMEM106C-221ENST00000553217 SYCP1Q15431 976 aa6.89□□□□□ -1.31
TMEM106C-221ENST00000553217 CCDC27Q2M243 656 aa6.89□□□□□ -1.31
TMEM106C-221ENST00000553217 NBPF6Q5VWK0 638 aa6.89□□□□□ -1.31
TMEM106C-221ENST00000553217 WDR63Q8IWG1 891 aa6.89□□□□□ -1.31
TMEM106C-221ENST00000553217 NLGN2Q8NFZ4 835 aa6.89□□□□□ -1.31
TMEM106C-221ENST00000553217 NBPF4Q96M43 638 aa6.89□□□□□ -1.31
TMEM106C-221ENST00000553217 SGIP1Q9BQI5 828 aa6.89□□□□□ -1.31
TMEM106C-221ENST00000553217 TERF2IPQ9NYB0 399 aa6.89□□□□□ -1.31
TMEM106C-221ENST00000553217 EMILIN1Q9Y6C2 1016 aa6.89□□□□□ -1.31
TMEM106C-221ENST00000553217 PNPLA7Q6ZV29 1317 aa6.89□□□□□ -1.31
TMEM106C-221ENST00000553217 TOGARAM1Q9Y4F4 1720 aa6.88□□□□□ -1.31
TMEM106C-221ENST00000553217 FYB1O15117 783 aa6.88□□□□□ -1.31
TMEM106C-221ENST00000553217 PER1O15534 1290 aaPredicted RBP6.88□□□□□ -1.31
TMEM106C-221ENST00000553217 HSP90AB1P08238 724 aaKnown RBP6.88□□□□□ -1.31
TMEM106C-221ENST00000553217 CDK11BP21127 795 aaKnown RBP6.88□□□□□ -1.31
TMEM106C-221ENST00000553217 GTF2F1P35269 517 aaKnown RBP eCLIP6.88□□□□□ -1.31
TMEM106C-221ENST00000553217 MCM2P49736 904 aa6.88□□□□□ -1.31
TMEM106C-221ENST00000553217 FGD1P98174 961 aa6.88□□□□□ -1.31
TMEM106C-221ENST00000553217 DMTNQ08495 405 aa6.88□□□□□ -1.31
TMEM106C-221ENST00000553217 UVSSAQ2YD98 709 aa6.88□□□□□ -1.31
TMEM106C-221ENST00000553217 HSP90AB2PQ58FF8 381 aa6.88□□□□□ -1.31
TMEM106C-221ENST00000553217 AMER1Q5JTC6 1135 aaPredicted RBP6.88□□□□□ -1.31
TMEM106C-221ENST00000553217 AKT1S1Q96B36 256 aa6.88□□□□□ -1.31
TMEM106C-221ENST00000553217 C22orf23Q9BZE7 217 aa6.88□□□□□ -1.31
TMEM106C-221ENST00000553217 MTFR1LQ9H019 292 aa6.88□□□□□ -1.31
TMEM106C-221ENST00000553217 LY75O60449 1722 aa6.87□□□□□ -1.31
TMEM106C-221ENST00000553217 NSD3Q9BZ95 1437 aa6.87□□□□□ -1.31
TMEM106C-221ENST00000553217 ANKRD36BQ8N2N9 1353 aa6.87□□□□□ -1.31
TMEM106C-221ENST00000553217 GOLGA6L6A8MZA4 724 aa6.87□□□□□ -1.31
TMEM106C-221ENST00000553217 IPO8O15397 1037 aaKnown RBP6.87□□□□□ -1.31
TMEM106C-221ENST00000553217 HDAC1Q13547 482 aaPredicted RBP6.87□□□□□ -1.31
TMEM106C-221ENST00000553217 RAB3GAP1Q15042 981 aa6.87□□□□□ -1.31
TMEM106C-221ENST00000553217 CASC1Q6TDU7 716 aa6.87□□□□□ -1.31
TMEM106C-221ENST00000553217 AMIGO3Q86WK7 504 aa6.87□□□□□ -1.31
TMEM106C-221ENST00000553217 ZNF784Q8NCA9 323 aaPredicted RBP6.87□□□□□ -1.31
TMEM106C-221ENST00000553217 ARXQ96QS3 562 aa6.87□□□□□ -1.31
TMEM106C-221ENST00000553217 CARD14Q9BXL6 1004 aa6.87□□□□□ -1.31
TMEM106C-221ENST00000553217 DDX19BQ9UMR2 479 aa6.87□□□□□ -1.31
TMEM106C-221ENST00000553217 EPB41L2O43491 1005 aaKnown RBP6.86□□□□□ -1.31
TMEM106C-221ENST00000553217 GABPB1Q06547 395 aaPredicted RBP6.86□□□□□ -1.31
TMEM106C-221ENST00000553217 TAF7LQ5H9L4 462 aa6.86□□□□□ -1.31
TMEM106C-221ENST00000553217 ZCRB1Q8TBF4 217 aaKnown RBP6.86□□□□□ -1.31
TMEM106C-221ENST00000553217 PDLIM2Q96JY6 352 aa6.86□□□□□ -1.31
TMEM106C-221ENST00000553217 TBC1D2Q9BYX2 928 aa6.86□□□□□ -1.31
TMEM106C-221ENST00000553217 TFCP2L1Q9NZI6 479 aa6.86□□□□□ -1.31
TMEM106C-221ENST00000553217 CCNL1Q9UK58 526 aaPredicted RBP6.86□□□□□ -1.31
TMEM106C-221ENST00000553217 ZKSCAN5Q9Y2L8 839 aa6.86□□□□□ -1.31
TMEM106C-221ENST00000553217 DCAF8L1A6NGE4 600 aa6.85□□□□□ -1.31
TMEM106C-221ENST00000553217 TUBB4AP04350 444 aa6.85□□□□□ -1.31
TMEM106C-221ENST00000553217 RGS3P49796 1198 aa6.85□□□□□ -1.31
TMEM106C-221ENST00000553217 GPR162Q16538 588 aa6.85□□□□□ -1.31
TMEM106C-221ENST00000553217 CTR9Q6PD62 1173 aa6.85□□□□□ -1.31
TMEM106C-221ENST00000553217 MPRIPQ6WCQ1 1025 aa6.85□□□□□ -1.31
TMEM106C-221ENST00000553217 COL23A1Q86Y22 540 aaPredicted RBP6.85□□□□□ -1.31
TMEM106C-221ENST00000553217 PUS7Q96PZ0 661 aaKnown RBP6.85□□□□□ -1.31
TMEM106C-221ENST00000553217 ITGB4P16144 1822 aa6.85□□□□□ -1.31
TMEM106C-221ENST00000553217 C5P01031 1676 aa6.84□□□□□ -1.31
TMEM106C-221ENST00000553217 CYP27B1O15528 508 aa6.84□□□□□ -1.31
TMEM106C-221ENST00000553217 TATP17735 454 aaPredicted RBP6.84□□□□□ -1.31
TMEM106C-221ENST00000553217 RNF20Q5VTR2 975 aa6.84□□□□□ -1.31
TMEM106C-221ENST00000553217 GCC1Q96CN9 775 aa6.84□□□□□ -1.31
TMEM106C-221ENST00000553217 DNAJC2Q99543 621 aaKnown RBP6.84□□□□□ -1.31
TMEM106C-221ENST00000553217 QSER1Q2KHR3 1735 aa6.84□□□□□ -1.31
TMEM106C-221ENST00000553217 CHD4Q14839 1912 aa6.84□□□□□ -1.32
TMEM106C-221ENST00000553217 PALLDQ8WX93 1383 aa6.83□□□□□ -1.32
TMEM106C-221ENST00000553217 MAP2P11137 1827 aaKnown RBP6.83□□□□□ -1.32
TMEM106C-221ENST00000553217 TAF1LQ8IZX4 1826 aa6.83□□□□□ -1.32
TMEM106C-221ENST00000553217 UQCRHLA0A096LP55 91 aa6.83□□□□□ -1.32
TMEM106C-221ENST00000553217 ST18O60284 1047 aa6.83□□□□□ -1.32
TMEM106C-221ENST00000553217 UQCRHP07919 91 aa6.83□□□□□ -1.32
TMEM106C-221ENST00000553217 YBX3P16989 372 aaKnown RBP eCLIP6.83□□□□□ -1.321e-7■■■□□ 16
TMEM106C-221ENST00000553217 RABEP1Q15276 862 aa6.83□□□□□ -1.32
TMEM106C-221ENST00000553217 BMP2KLQ5H9B9 411 aa6.83□□□□□ -1.32
TMEM106C-221ENST00000553217 MYRIPQ8NFW9 859 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms