RNA–Protein interactions for RNA: ENST00000553038.5

ACTR6-213, Transcript of ARP6 actin related protein 6 homolog, humanhuman

TSL 1 (best)

Gene ACTR6, Length 2,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTR6-213ENST00000553038 TNS2Q63HR2 1409 aa17.69■□□□□ 0.42
ACTR6-213ENST00000553038 LRP6O75581 1613 aa17.69■□□□□ 0.42
ACTR6-213ENST00000553038 WNK3Q9BYP7 1800 aa17.69■□□□□ 0.42
ACTR6-213ENST00000553038 FAM98CQ17RN3 349 aaKnown RBP17.69■□□□□ 0.42
ACTR6-213ENST00000553038 PTCD1O75127 700 aaKnown RBP17.68■□□□□ 0.42
ACTR6-213ENST00000553038 CCT4P50991 539 aaKnown RBP17.68■□□□□ 0.42
ACTR6-213ENST00000553038 HEG1Q9ULI3 1381 aa17.68■□□□□ 0.42
ACTR6-213ENST00000553038 VPS72Q15906 364 aa17.67■□□□□ 0.42
ACTR6-213ENST00000553038 MYL6BP14649 208 aa17.67■□□□□ 0.42
ACTR6-213ENST00000553038 BARGINQ6ZT62 677 aa17.67■□□□□ 0.42
ACTR6-213ENST00000553038 SIRT2Q8IXJ6 389 aa17.66■□□□□ 0.42
ACTR6-213ENST00000553038 FNBP4Q8N3X1 1017 aaPredicted RBP17.66■□□□□ 0.42
ACTR6-213ENST00000553038 HYPKQ9NX55 129 aa17.66■□□□□ 0.42
ACTR6-213ENST00000553038 BCL9LQ86UU0 1499 aa17.66■□□□□ 0.42
ACTR6-213ENST00000553038 AIMP1Q12904 312 aaKnown RBP17.65■□□□□ 0.42
ACTR6-213ENST00000553038 SMC5Q8IY18 1101 aa17.65■□□□□ 0.42
ACTR6-213ENST00000553038 PROSER3Q2NL68 480 aa17.65■□□□□ 0.42
ACTR6-213ENST00000553038 PIGBQ92521 554 aa17.65■□□□□ 0.42
ACTR6-213ENST00000553038 TOGARAM1Q9Y4F4 1720 aa17.64■□□□□ 0.41
ACTR6-213ENST00000553038 C8orf34Q49A92 452 aa17.64■□□□□ 0.41
ACTR6-213ENST00000553038 DDX21Q9NR30 783 aaKnown RBP eCLIP17.64■□□□□ 0.41
ACTR6-213ENST00000553038 USP16Q9Y5T5 823 aa17.64■□□□□ 0.41
ACTR6-213ENST00000553038 C5P01031 1676 aa17.64■□□□□ 0.41
ACTR6-213ENST00000553038 CACNA1FO60840 1977 aa17.64■□□□□ 0.41
ACTR6-213ENST00000553038 RBM42Q9BTD8 480 aaKnown RBP17.64■□□□□ 0.41
ACTR6-213ENST00000553038 AFF2P51816 1311 aa17.63■□□□□ 0.41
ACTR6-213ENST00000553038 PI4KAP2A4QPH2 592 aa17.63■□□□□ 0.41
ACTR6-213ENST00000553038 DDX58O95786 925 aaKnown RBP17.63■□□□□ 0.41
ACTR6-213ENST00000553038 PI4KAP1Q8N8J0 262 aa17.63■□□□□ 0.41
ACTR6-213ENST00000553038 ACSBG1Q96GR2 724 aa17.63■□□□□ 0.41
ACTR6-213ENST00000553038 MEIS3Q99687 375 aa17.63■□□□□ 0.41
ACTR6-213ENST00000553038 PIP4K2AP48426 406 aaPredicted RBP17.62■□□□□ 0.41
ACTR6-213ENST00000553038 PRIM1P49642 420 aaKnown RBP17.62■□□□□ 0.41
ACTR6-213ENST00000553038 ASAP1Q9ULH1 1129 aa17.62■□□□□ 0.41
ACTR6-213ENST00000553038 FAM161AQ3B820 660 aa17.62■□□□□ 0.41
ACTR6-213ENST00000553038 KAT6BQ8WYB5 2073 aa17.61■□□□□ 0.41
ACTR6-213ENST00000553038 MARCH10Q8NA82 808 aaPredicted RBP17.61■□□□□ 0.41
ACTR6-213ENST00000553038 DNAAF4Q8WXU2 420 aa17.61■□□□□ 0.41
ACTR6-213ENST00000553038 SRCIN1Q9C0H9 1055 aa17.6■□□□□ 0.41
ACTR6-213ENST00000553038 MAP3K2Q9Y2U5 619 aa17.6■□□□□ 0.41
ACTR6-213ENST00000553038 RIC3Q7Z5B4 369 aa17.6■□□□□ 0.41
ACTR6-213ENST00000553038 ATG3Q9NT62 314 aa17.6■□□□□ 0.41
ACTR6-213ENST00000553038 KCPQ6ZWJ8 1503 aa17.59■□□□□ 0.41
ACTR6-213ENST00000553038 XAGE3Q8WTP9 111 aa17.59■□□□□ 0.41
ACTR6-213ENST00000553038 PXDNLA1KZ92 1463 aa17.59■□□□□ 0.41
ACTR6-213ENST00000553038 PAPPAQ13219 1627 aa17.59■□□□□ 0.41
ACTR6-213ENST00000553038 NUCB1Q02818 461 aa17.59■□□□□ 0.41
ACTR6-213ENST00000553038 PDIA6Q15084 440 aa17.59■□□□□ 0.41
ACTR6-213ENST00000553038 KSR2Q6VAB6 950 aa17.59■□□□□ 0.41
ACTR6-213ENST00000553038 NPM2Q86SE8 214 aaKnown RBP17.59■□□□□ 0.41
ACTR6-213ENST00000553038 BCL9O00512 1426 aa17.58■□□□□ 0.41
ACTR6-213ENST00000553038 DOT1LQ8TEK3 1739 aa17.58■□□□□ 0.41
ACTR6-213ENST00000553038 GNAI3P08754 354 aa17.58■□□□□ 0.4
ACTR6-213ENST00000553038 COPS6Q7L5N1 327 aa17.58■□□□□ 0.4
ACTR6-213ENST00000553038 ITGB4P16144 1822 aa17.58■□□□□ 0.4
ACTR6-213ENST00000553038 ADCY9O60503 1353 aa17.57■□□□□ 0.4
ACTR6-213ENST00000553038 ZNF330Q9Y3S2 320 aaPredicted RBP17.57■□□□□ 0.4
ACTR6-213ENST00000553038 UBR2Q8IWV8 1755 aa17.57■□□□□ 0.4
ACTR6-213ENST00000553038 GJD4Q96KN9 370 aaPredicted RBP17.57■□□□□ 0.4
ACTR6-213ENST00000553038 LNPKQ9C0E8 428 aa17.57■□□□□ 0.4
ACTR6-213ENST00000553038 TRPC5Q9UL62 973 aaPredicted RBP17.57■□□□□ 0.4
ACTR6-213ENST00000553038 LAMB4A4D0S4 1761 aa17.57■□□□□ 0.4
ACTR6-213ENST00000553038 ATP10DQ9P241 1426 aa17.57■□□□□ 0.4
ACTR6-213ENST00000553038 A1BGP04217 495 aa17.56■□□□□ 0.4
ACTR6-213ENST00000553038 GNAI2P04899 355 aa17.56■□□□□ 0.4
ACTR6-213ENST00000553038 UBTFL1P0CB47 393 aaPredicted RBP17.56■□□□□ 0.4
ACTR6-213ENST00000553038 CEP85Q6P2H3 762 aa17.56■□□□□ 0.4
ACTR6-213ENST00000553038 ANKRD44Q8N8A2 993 aa17.56■□□□□ 0.4
ACTR6-213ENST00000553038 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.56■□□□□ 0.4
ACTR6-213ENST00000553038 NEXNQ0ZGT2 675 aa17.55■□□□□ 0.4
ACTR6-213ENST00000553038 ANKRD45Q5TZF3 282 aa17.55■□□□□ 0.4
ACTR6-213ENST00000553038 TEX13AQ9BXU3 409 aaPredicted RBP17.55■□□□□ 0.4
ACTR6-213ENST00000553038 STARD3NLO95772 234 aa17.55■□□□□ 0.4
ACTR6-213ENST00000553038 CHD1LQ86WJ1 897 aa17.55■□□□□ 0.4
ACTR6-213ENST00000553038 DNAJC10Q8IXB1 793 aa17.55■□□□□ 0.4
ACTR6-213ENST00000553038 GCC1Q96CN9 775 aa17.55■□□□□ 0.4
ACTR6-213ENST00000553038 NOP58Q9Y2X3 529 aaKnown RBP17.55■□□□□ 0.4
ACTR6-213ENST00000553038 ERBB4Q15303 1308 aa17.55■□□□□ 0.4
ACTR6-213ENST00000553038 BEND3Q5T5X7 828 aa17.54■□□□□ 0.4
ACTR6-213ENST00000553038 ARXQ96QS3 562 aa17.54■□□□□ 0.4
ACTR6-213ENST00000553038 ANKRD13DQ6ZTN6 518 aa17.54■□□□□ 0.4
ACTR6-213ENST00000553038 RPAP2Q8IXW5 612 aaPredicted RBP17.54■□□□□ 0.4
ACTR6-213ENST00000553038 VSIG10Q8N0Z9 540 aa17.54■□□□□ 0.4
ACTR6-213ENST00000553038 C9orf78Q9NZ63 289 aaPredicted RBP17.54■□□□□ 0.4
ACTR6-213ENST00000553038 GLI3P10071 1580 aa17.53■□□□□ 0.4
ACTR6-213ENST00000553038 DCTPP1Q9H773 170 aa17.53■□□□□ 0.4
ACTR6-213ENST00000553038 QTRT2Q9H974 415 aaKnown RBP17.53■□□□□ 0.4
ACTR6-213ENST00000553038 ZBTB47Q9UFB7 747 aaPredicted RBP17.53■□□□□ 0.4
ACTR6-213ENST00000553038 HMMRO75330 724 aa17.52■□□□□ 0.4
ACTR6-213ENST00000553038 SEC24BO95487 1268 aa17.52■□□□□ 0.4
ACTR6-213ENST00000553038 MYD88Q99836 296 aa17.52■□□□□ 0.4
ACTR6-213ENST00000553038 NBPF26B4DH59 902 aa17.52■□□□□ 0.39
ACTR6-213ENST00000553038 ANP32AP39687 249 aaKnown RBP17.52■□□□□ 0.39
ACTR6-213ENST00000553038 CWF19L2Q2TBE0 894 aaKnown RBP17.52■□□□□ 0.39
ACTR6-213ENST00000553038 NBPF14Q5TI25 921 aa17.52■□□□□ 0.39
ACTR6-213ENST00000553038 NBPF10Q6P3W6 841 aaKnown RBP17.52■□□□□ 0.39
ACTR6-213ENST00000553038 NBPF15Q8N660 670 aa17.52■□□□□ 0.39
ACTR6-213ENST00000553038 USP44Q9H0E7 712 aa17.52■□□□□ 0.39
ACTR6-213ENST00000553038 LRRFIP2Q9Y608 721 aaKnown RBP17.52■□□□□ 0.39
ACTR6-213ENST00000553038 KCNQ2O43526 872 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms