RNA–Protein interactions for RNA: ENST00000552801.6

TMEM116-217, Transcript of transmembrane protein 116, humanhuman

TSL 5

Gene TMEM116, Length 1,397 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-217ENST00000552801 NUBP1P53384 320 aa11.77□□□□□ -0.53
TMEM116-217ENST00000552801 EVX2Q03828 476 aa11.77□□□□□ -0.53
TMEM116-217ENST00000552801 AEBP1Q8IUX7 1158 aa11.77□□□□□ -0.53
TMEM116-217ENST00000552801 ZNF831Q5JPB2 1677 aa11.77□□□□□ -0.53
TMEM116-217ENST00000552801 N4BP2Q86UW6 1770 aaPredicted RBP11.76□□□□□ -0.53
TMEM116-217ENST00000552801 KDRP35968 1356 aa11.76□□□□□ -0.53
TMEM116-217ENST00000552801 C16orf71Q8IYS4 520 aaPredicted RBP11.76□□□□□ -0.53
TMEM116-217ENST00000552801 TSPYL2Q9H2G4 693 aaPredicted RBP11.76□□□□□ -0.53
TMEM116-217ENST00000552801 COL5A3P25940 1745 aaPredicted RBP11.75□□□□□ -0.53
TMEM116-217ENST00000552801 GYS1P13807 737 aa11.75□□□□□ -0.53
TMEM116-217ENST00000552801 CRKLP46109 303 aaKnown RBP11.75□□□□□ -0.53
TMEM116-217ENST00000552801 AKAP4Q5JQC9 854 aa11.75□□□□□ -0.53
TMEM116-217ENST00000552801 RASEFQ8IZ41 740 aa11.75□□□□□ -0.53
TMEM116-217ENST00000552801 KDM6AO15550 1401 aaPredicted RBP11.75□□□□□ -0.53
TMEM116-217ENST00000552801 C4AP0C0L4 1744 aa11.75□□□□□ -0.53
TMEM116-217ENST00000552801 GOLGB1Q14789 3259 aaKnown RBP11.74□□□□□ -0.53
TMEM116-217ENST00000552801 PXDNLA1KZ92 1463 aa11.74□□□□□ -0.53
TMEM116-217ENST00000552801 DPEP1P16444 411 aa11.74□□□□□ -0.53
TMEM116-217ENST00000552801 HSPA6P17066 643 aa11.74□□□□□ -0.53
TMEM116-217ENST00000552801 NPM2Q86SE8 214 aaKnown RBP11.74□□□□□ -0.53
TMEM116-217ENST00000552801 PIM2Q9P1W9 311 aa11.74□□□□□ -0.53
TMEM116-217ENST00000552801 KIF13BQ9NQT8 1826 aa11.74□□□□□ -0.53
TMEM116-217ENST00000552801 ADCY9O60503 1353 aa11.74□□□□□ -0.53
TMEM116-217ENST00000552801 C10orf71Q711Q0 1435 aa11.73□□□□□ -0.53
TMEM116-217ENST00000552801 CNGB1Q14028 1251 aaPredicted RBP11.73□□□□□ -0.53
TMEM116-217ENST00000552801 DALRD3Q5D0E6 543 aaKnown RBP11.73□□□□□ -0.53
TMEM116-217ENST00000552801 TTC5Q8N0Z6 440 aa11.73□□□□□ -0.53
TMEM116-217ENST00000552801 SLC4A9Q96Q91 983 aa11.73□□□□□ -0.53
TMEM116-217ENST00000552801 SCN11AQ9UI33 1791 aa11.73□□□□□ -0.53
TMEM116-217ENST00000552801 DIAPH1O60610 1272 aaKnown RBP11.72□□□□□ -0.53
TMEM116-217ENST00000552801 HMOX1P09601 288 aa11.72□□□□□ -0.53
TMEM116-217ENST00000552801 IL13P35225 146 aa11.72□□□□□ -0.53
TMEM116-217ENST00000552801 SLC52A2Q9HAB3 445 aa11.72□□□□□ -0.53
TMEM116-217ENST00000552801 SRP68Q9UHB9 627 aaKnown RBP11.72□□□□□ -0.53
TMEM116-217ENST00000552801 USP42Q9H9J4 1324 aaKnown RBP11.72□□□□□ -0.53
TMEM116-217ENST00000552801 CC2D1BQ5T0F9 858 aaKnown RBP11.71□□□□□ -0.53
TMEM116-217ENST00000552801 DCAF8Q5TAQ9 597 aa11.71□□□□□ -0.53
TMEM116-217ENST00000552801 FAM212AQ96EL1 285 aa11.71□□□□□ -0.53
TMEM116-217ENST00000552801 MYH14Q7Z406 1995 aaKnown RBP11.71□□□□□ -0.54
TMEM116-217ENST00000552801 U2SURPO15042 1029 aaKnown RBP11.7□□□□□ -0.54
TMEM116-217ENST00000552801 NPHP1O15259 732 aa11.7□□□□□ -0.54
TMEM116-217ENST00000552801 DNAJC10Q8IXB1 793 aa11.7□□□□□ -0.54
TMEM116-217ENST00000552801 KDM2BQ8NHM5 1336 aa11.7□□□□□ -0.54
TMEM116-217ENST00000552801 VIRMAQ69YN4 1812 aaKnown RBP11.69□□□□□ -0.54
TMEM116-217ENST00000552801 RNMTO43148 476 aaKnown RBP11.69□□□□□ -0.54
TMEM116-217ENST00000552801 TOMM70O94826 608 aa11.69□□□□□ -0.54
TMEM116-217ENST00000552801 STARD3NLO95772 234 aa11.69□□□□□ -0.54
TMEM116-217ENST00000552801 APLP1P51693 650 aa11.69□□□□□ -0.54
TMEM116-217ENST00000552801 TEFQ10587 303 aa11.69□□□□□ -0.54
TMEM116-217ENST00000552801 C9orf131Q5VYM1 1079 aa11.69□□□□□ -0.54
TMEM116-217ENST00000552801 USPL1Q5W0Q7 1092 aa11.69□□□□□ -0.54
TMEM116-217ENST00000552801 ARFGEF1Q9Y6D6 1849 aa11.69□□□□□ -0.54
TMEM116-217ENST00000552801 TJP1Q07157 1748 aa11.69□□□□□ -0.54
TMEM116-217ENST00000552801 SLC39A6Q13433 755 aa11.68□□□□□ -0.54
TMEM116-217ENST00000552801 AMER1Q5JTC6 1135 aaPredicted RBP11.68□□□□□ -0.54
TMEM116-217ENST00000552801 LGR6Q9HBX8 967 aa11.68□□□□□ -0.54
TMEM116-217ENST00000552801 RNF181Q9P0P0 153 aa11.68□□□□□ -0.54
TMEM116-217ENST00000552801 ZNF330Q9Y3S2 320 aaPredicted RBP11.68□□□□□ -0.54
TMEM116-217ENST00000552801 KIF7Q2M1P5 1343 aa11.68□□□□□ -0.54
TMEM116-217ENST00000552801 A0A087WZG4 1122 aa11.67□□□□□ -0.54
TMEM116-217ENST00000552801 KIF3CO14782 793 aa11.67□□□□□ -0.54
TMEM116-217ENST00000552801 CANXP27824 592 aaKnown RBP11.67□□□□□ -0.54
TMEM116-217ENST00000552801 INTS5Q6P9B9 1019 aaKnown RBP11.67□□□□□ -0.54
TMEM116-217ENST00000552801 CFAP53Q96M91 514 aa11.67□□□□□ -0.54
TMEM116-217ENST00000552801 KIAA1551Q9HCM1 1747 aa11.67□□□□□ -0.54
TMEM116-217ENST00000552801 BRCA1P38398 1863 aaKnown RBP11.67□□□□□ -0.54
TMEM116-217ENST00000552801 COL15A1P39059 1388 aa11.67□□□□□ -0.54
TMEM116-217ENST00000552801 CHRNA5P30532 468 aa11.67□□□□□ -0.54
TMEM116-217ENST00000552801 DDR1Q08345 913 aa11.67□□□□□ -0.54
TMEM116-217ENST00000552801 MTHFSDQ2M296 383 aaKnown RBP11.67□□□□□ -0.54
TMEM116-217ENST00000552801 GAS2L2Q8NHY3 880 aa11.67□□□□□ -0.54
TMEM116-217ENST00000552801 SP7Q8TDD2 431 aaPredicted RBP11.67□□□□□ -0.54
TMEM116-217ENST00000552801 NARFQ9UHQ1 456 aa11.67□□□□□ -0.54
TMEM116-217ENST00000552801 SOS1Q07889 1333 aaPredicted RBP11.66□□□□□ -0.54
TMEM116-217ENST00000552801 POLRMTO00411 1230 aaKnown RBP11.66□□□□□ -0.54
TMEM116-217ENST00000552801 CYP19A1P11511 503 aaPredicted RBP11.66□□□□□ -0.54
TMEM116-217ENST00000552801 GSE1Q14687 1217 aa11.66□□□□□ -0.54
TMEM116-217ENST00000552801 BICDL1Q6ZP65 573 aa11.66□□□□□ -0.54
TMEM116-217ENST00000552801 VSIG10Q8N0Z9 540 aa11.66□□□□□ -0.54
TMEM116-217ENST00000552801 TEX13AQ9BXU3 409 aaPredicted RBP11.66□□□□□ -0.54
TMEM116-217ENST00000552801 NMRK2Q9NPI5 230 aa11.66□□□□□ -0.54
TMEM116-217ENST00000552801 GNAT3A8MTJ3 354 aa11.65□□□□□ -0.55
TMEM116-217ENST00000552801 H0YIN7 160 aa11.65□□□□□ -0.55
TMEM116-217ENST00000552801 SERPINB2P05120 415 aa11.65□□□□□ -0.55
TMEM116-217ENST00000552801 IFFO2Q5TF58 517 aa11.65□□□□□ -0.55
TMEM116-217ENST00000552801 ZNF579Q8NAF0 562 aaKnown RBP11.65□□□□□ -0.55
TMEM116-217ENST00000552801 CIZ1Q9ULV3 898 aaPredicted RBP11.65□□□□□ -0.55
TMEM116-217ENST00000552801 ZBTB1Q9Y2K1 713 aa11.65□□□□□ -0.55
TMEM116-217ENST00000552801 KCNA3P22001 575 aa11.64□□□□□ -0.55
TMEM116-217ENST00000552801 TM4SF1P30408 202 aa11.64□□□□□ -0.55
TMEM116-217ENST00000552801 NFIXQ14938 502 aa11.64□□□□□ -0.55
TMEM116-217ENST00000552801 C2CD5Q86YS7 1000 aa11.64□□□□□ -0.55
TMEM116-217ENST00000552801 TTLL6Q8N841 843 aa11.64□□□□□ -0.55
TMEM116-217ENST00000552801 RBM46Q8TBY0 533 aaKnown RBP11.64□□□□□ -0.55
TMEM116-217ENST00000552801 NUDCQ9Y266 331 aa11.64□□□□□ -0.55
TMEM116-217ENST00000552801 MRC1P22897 1456 aa11.63□□□□□ -0.55
TMEM116-217ENST00000552801 AFDNP55196 1824 aaKnown RBP11.62□□□□□ -0.55
TMEM116-217ENST00000552801 NEFMP07197 916 aa11.62□□□□□ -0.55
TMEM116-217ENST00000552801 LMNB1P20700 586 aa11.62□□□□□ -0.55
TMEM116-217ENST00000552801 PDE6BP35913 854 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms