RNA–Protein interactions for RNA: ENST00000552713.5

CDK4-213, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 685 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-213ENST00000552713 USP42Q9H9J4 1324 aaKnown RBP11.78□□□□□ -0.52
CDK4-213ENST00000552713 DICER1Q9UPY3 1922 aaKnown RBP11.78□□□□□ -0.52
CDK4-213ENST00000552713 NRXN2Q9P2S2 1712 aa11.77□□□□□ -0.52
CDK4-213ENST00000552713 POLRMTO00411 1230 aaKnown RBP11.77□□□□□ -0.53
CDK4-213ENST00000552713 TM4SF1P30408 202 aa11.76□□□□□ -0.53
CDK4-213ENST00000552713 CABP4P57796 275 aa11.76□□□□□ -0.53
CDK4-213ENST00000552713 CDCA8Q53HL2 280 aa11.76□□□□□ -0.53
CDK4-213ENST00000552713 ZNF530Q6P9A1 599 aaPredicted RBP11.76□□□□□ -0.53
CDK4-213ENST00000552713 CHRDL2Q6WN34 429 aa11.76□□□□□ -0.53
CDK4-213ENST00000552713 SMC1BQ8NDV3 1235 aa11.76□□□□□ -0.53
CDK4-213ENST00000552713 ANKRD31Q8N7Z5 1873 aa11.76□□□□□ -0.53
CDK4-213ENST00000552713 PCNTO95613 3336 aa11.76□□□□□ -0.53
CDK4-213ENST00000552713 CACNA1SQ13698 1873 aa11.75□□□□□ -0.53
CDK4-213ENST00000552713 INTS5Q6P9B9 1019 aaKnown RBP11.75□□□□□ -0.53
CDK4-213ENST00000552713 AEBP1Q8IUX7 1158 aa11.75□□□□□ -0.53
CDK4-213ENST00000552713 NFATC2IPQ8NCF5 419 aa11.75□□□□□ -0.53
CDK4-213ENST00000552713 HSP90AB1P08238 724 aaKnown RBP11.74□□□□□ -0.53
CDK4-213ENST00000552713 HSPA1AP0DMV8 641 aaKnown RBP11.74□□□□□ -0.53
CDK4-213ENST00000552713 HSPA1BP0DMV9 641 aaKnown RBP11.74□□□□□ -0.53
CDK4-213ENST00000552713 PLEKHO1Q53GL0 409 aaPredicted RBP11.74□□□□□ -0.53
CDK4-213ENST00000552713 FER1L6Q2WGJ9 1857 aa11.74□□□□□ -0.53
CDK4-213ENST00000552713 POTECB2RU33 542 aa11.73□□□□□ -0.53
CDK4-213ENST00000552713 MTHFSP49914 203 aa11.73□□□□□ -0.53
CDK4-213ENST00000552713 USPL1Q5W0Q7 1092 aa11.73□□□□□ -0.53
CDK4-213ENST00000552713 GLTPD2A6NH11 291 aa11.72□□□□□ -0.53
CDK4-213ENST00000552713 NFIXQ14938 502 aa11.72□□□□□ -0.53
CDK4-213ENST00000552713 DNAJC10Q8IXB1 793 aa11.72□□□□□ -0.53
CDK4-213ENST00000552713 COL11A2P13942 1736 aaPredicted RBP11.72□□□□□ -0.53
CDK4-213ENST00000552713 CARMIL3Q8ND23 1372 aa11.71□□□□□ -0.53
CDK4-213ENST00000552713 SOS1Q07889 1333 aaPredicted RBP11.71□□□□□ -0.53
CDK4-213ENST00000552713 VEGFAP15692 232 aaPredicted RBP11.71□□□□□ -0.53
CDK4-213ENST00000552713 BCL2L12Q9HB09 334 aa11.71□□□□□ -0.53
CDK4-213ENST00000552713 NFKBIEO00221 500 aa11.7□□□□□ -0.54
CDK4-213ENST00000552713 LMNB1P20700 586 aa11.7□□□□□ -0.54
CDK4-213ENST00000552713 AMOTQ4VCS5 1084 aa11.7□□□□□ -0.54
CDK4-213ENST00000552713 SLX4Q8IY92 1834 aa11.7□□□□□ -0.54
CDK4-213ENST00000552713 UBR2Q8IWV8 1755 aa11.69□□□□□ -0.54
CDK4-213ENST00000552713 ZC3H4Q9UPT8 1303 aaKnown RBP11.69□□□□□ -0.54
CDK4-213ENST00000552713 ZPR1O75312 459 aa11.69□□□□□ -0.54
CDK4-213ENST00000552713 SLC39A6Q13433 755 aa11.69□□□□□ -0.54
CDK4-213ENST00000552713 C1orf141Q5JVX7 400 aa11.69□□□□□ -0.54
CDK4-213ENST00000552713 POLR3GLQ9BT43 218 aa11.69□□□□□ -0.54
CDK4-213ENST00000552713 LGR6Q9HBX8 967 aa11.69□□□□□ -0.54
CDK4-213ENST00000552713 COL15A1P39059 1388 aa11.68□□□□□ -0.54
CDK4-213ENST00000552713 SERPINB2P05120 415 aa11.68□□□□□ -0.54
CDK4-213ENST00000552713 CYP19A1P11511 503 aaPredicted RBP11.68□□□□□ -0.54
CDK4-213ENST00000552713 SULT6B1Q6IMI4 303 aa11.68□□□□□ -0.54
CDK4-213ENST00000552713 NARFQ9UHQ1 456 aa11.68□□□□□ -0.54
CDK4-213ENST00000552713 ZBTB1Q9Y2K1 713 aa11.68□□□□□ -0.54
CDK4-213ENST00000552713 POTEIP0CG38 1075 aa11.67□□□□□ -0.54
CDK4-213ENST00000552713 POTEJP0CG39 1038 aa11.67□□□□□ -0.54
CDK4-213ENST00000552713 C2CD5Q86YS7 1000 aa11.67□□□□□ -0.54
CDK4-213ENST00000552713 TTLL6Q8N841 843 aa11.67□□□□□ -0.54
CDK4-213ENST00000552713 MRC1P22897 1456 aa11.67□□□□□ -0.54
CDK4-213ENST00000552713 SLC52A2Q9HAB3 445 aa11.66□□□□□ -0.54
CDK4-213ENST00000552713 ARFGEF2Q9Y6D5 1785 aa11.65□□□□□ -0.54
CDK4-213ENST00000552713 IL13P35225 146 aa11.65□□□□□ -0.54
CDK4-213ENST00000552713 BICDL1Q6ZP65 573 aa11.65□□□□□ -0.54
CDK4-213ENST00000552713 CCDC24Q8N4L8 307 aa11.65□□□□□ -0.54
CDK4-213ENST00000552713 PANK3Q9H999 370 aa11.65□□□□□ -0.54
CDK4-213ENST00000552713 MKRN1Q9UHC7 482 aaKnown RBP11.65□□□□□ -0.54
CDK4-213ENST00000552713 SCN7AQ01118 1682 aa11.65□□□□□ -0.55
CDK4-213ENST00000552713 H0YIN7 160 aa11.64□□□□□ -0.55
CDK4-213ENST00000552713 RNMTO43148 476 aaKnown RBP11.64□□□□□ -0.55
CDK4-213ENST00000552713 SCN4AP35499 1836 aa11.63□□□□□ -0.55
CDK4-213ENST00000552713 FOXN1O15353 648 aa11.63□□□□□ -0.55
CDK4-213ENST00000552713 C21orf2O43822 256 aa11.63□□□□□ -0.55
CDK4-213ENST00000552713 CANXP27824 592 aaKnown RBP11.63□□□□□ -0.55
CDK4-213ENST00000552713 AKAP4Q5JQC9 854 aa11.63□□□□□ -0.55
CDK4-213ENST00000552713 TBC1D9BQ66K14 1250 aa11.63□□□□□ -0.55
CDK4-213ENST00000552713 ZNF622Q969S3 477 aaKnown RBP eCLIP11.63□□□□□ -0.55
CDK4-213ENST00000552713 SIPA1L3O60292 1781 aaPredicted RBP11.63□□□□□ -0.55
CDK4-213ENST00000552713 DDNO94850 711 aaPredicted RBP11.62□□□□□ -0.55
CDK4-213ENST00000552713 ERFEQ4G0M1 354 aa11.62□□□□□ -0.55
CDK4-213ENST00000552713 CHADLQ6NUI6 762 aa11.62□□□□□ -0.55
CDK4-213ENST00000552713 DPY19L2Q6NUT2 758 aa11.62□□□□□ -0.55
CDK4-213ENST00000552713 MORC1Q86VD1 984 aa11.62□□□□□ -0.55
CDK4-213ENST00000552713 SP7Q8TDD2 431 aaPredicted RBP11.62□□□□□ -0.55
CDK4-213ENST00000552713 CREBZFQ9NS37 354 aa11.62□□□□□ -0.55
CDK4-213ENST00000552713 HMOX1P09601 288 aa11.61□□□□□ -0.55
CDK4-213ENST00000552713 EIF5P55010 431 aaKnown RBP11.61□□□□□ -0.55
CDK4-213ENST00000552713 BCORQ6W2J9 1755 aa11.61□□□□□ -0.55
CDK4-213ENST00000552713 CNTNAP1P78357 1384 aa11.6□□□□□ -0.55
CDK4-213ENST00000552713 MTHFSDQ2M296 383 aaKnown RBP11.6□□□□□ -0.55
CDK4-213ENST00000552713 PRR5LQ6MZQ0 368 aa11.6□□□□□ -0.55
CDK4-213ENST00000552713 PASKQ96RG2 1323 aa11.6□□□□□ -0.55
CDK4-213ENST00000552713 ADAMTSL1Q8N6G6 1762 aa11.59□□□□□ -0.55
CDK4-213ENST00000552713 VSIG10Q8N0Z9 540 aa11.59□□□□□ -0.55
CDK4-213ENST00000552713 TBC1D2BQ9UPU7 963 aa11.59□□□□□ -0.55
CDK4-213ENST00000552713 VEGFBP49765 207 aa11.58□□□□□ -0.56
CDK4-213ENST00000552713 SAMD1Q6SPF0 538 aaPredicted RBP11.58□□□□□ -0.56
CDK4-213ENST00000552713 BRIP1Q9BX63 1249 aa11.58□□□□□ -0.56
CDK4-213ENST00000552713 TAOK3Q9H2K8 898 aa11.58□□□□□ -0.56
CDK4-213ENST00000552713 LTBP3Q9NS15 1303 aa11.58□□□□□ -0.56
CDK4-213ENST00000552713 ITGBL1O95965 494 aaPredicted RBP11.57□□□□□ -0.56
CDK4-213ENST00000552713 HSPA5P11021 654 aaKnown RBP11.57□□□□□ -0.56
CDK4-213ENST00000552713 PDE6BP35913 854 aa11.57□□□□□ -0.56
CDK4-213ENST00000552713 ZNF496Q96IT1 587 aaPredicted RBP11.57□□□□□ -0.56
CDK4-213ENST00000552713 PRDM10Q9NQV6 1147 aa11.57□□□□□ -0.56
CDK4-213ENST00000552713 ZNF330Q9Y3S2 320 aaPredicted RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms