RNA–Protein interactions for RNA: ENST00000552480.1

CACNB3-223, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 927 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-223ENST00000552480 F6X3S4 739 aa16.02■□□□□ 0.16
CACNB3-223ENST00000552480 HYPKQ9NX55 129 aa16.02■□□□□ 0.16
CACNB3-223ENST00000552480 ITGB4P16144 1822 aa16.02■□□□□ 0.16
CACNB3-223ENST00000552480 DDB1Q16531 1140 aa16.01■□□□□ 0.15
CACNB3-223ENST00000552480 DDX21Q9NR30 783 aaKnown RBP eCLIP16.01■□□□□ 0.15
CACNB3-223ENST00000552480 DOT1LQ8TEK3 1739 aa16.01■□□□□ 0.15
CACNB3-223ENST00000552480 SLC4A10Q6U841 1118 aa16■□□□□ 0.15
CACNB3-223ENST00000552480 PDIA6Q15084 440 aa15.99■□□□□ 0.15
CACNB3-223ENST00000552480 PROSER3Q2NL68 480 aa15.99■□□□□ 0.15
CACNB3-223ENST00000552480 MEX3CQ5U5Q3 659 aaKnown RBP15.99■□□□□ 0.15
CACNB3-223ENST00000552480 BCL9O00512 1426 aa15.99■□□□□ 0.15
CACNB3-223ENST00000552480 ATP10DQ9P241 1426 aa15.99■□□□□ 0.15
CACNB3-223ENST00000552480 ERBB4Q15303 1308 aa15.98■□□□□ 0.15
CACNB3-223ENST00000552480 ANXA1P04083 346 aa15.98■□□□□ 0.15
CACNB3-223ENST00000552480 PIGBQ92521 554 aa15.98■□□□□ 0.15
CACNB3-223ENST00000552480 USP21Q9UK80 565 aa15.98■□□□□ 0.15
CACNB3-223ENST00000552480 USP16Q9Y5T5 823 aa15.98■□□□□ 0.15
CACNB3-223ENST00000552480 ADCY9O60503 1353 aa15.98■□□□□ 0.15
CACNB3-223ENST00000552480 DNAAF4Q8WXU2 420 aa15.97■□□□□ 0.15
CACNB3-223ENST00000552480 MEIS3Q99687 375 aa15.97■□□□□ 0.15
CACNB3-223ENST00000552480 C1orf115Q9H7X2 142 aa15.97■□□□□ 0.15
CACNB3-223ENST00000552480 TSHZ2Q9NRE2 1034 aa15.97■□□□□ 0.15
CACNB3-223ENST00000552480 THSD7AQ9UPZ6 1657 aa15.97■□□□□ 0.15
CACNB3-223ENST00000552480 DDX58O95786 925 aaKnown RBP15.96■□□□□ 0.15
CACNB3-223ENST00000552480 KSR2Q6VAB6 950 aa15.96■□□□□ 0.15
CACNB3-223ENST00000552480 PI4KAP2A4QPH2 592 aa15.95■□□□□ 0.14
CACNB3-223ENST00000552480 GNAI3P08754 354 aa15.95■□□□□ 0.14
CACNB3-223ENST00000552480 FAM98CQ17RN3 349 aaKnown RBP15.95■□□□□ 0.14
CACNB3-223ENST00000552480 SMC5Q8IY18 1101 aa15.95■□□□□ 0.14
CACNB3-223ENST00000552480 VSIG10Q8N0Z9 540 aa15.95■□□□□ 0.14
CACNB3-223ENST00000552480 PI4KAP1Q8N8J0 262 aa15.95■□□□□ 0.14
CACNB3-223ENST00000552480 MARCH10Q8NA82 808 aaPredicted RBP15.95■□□□□ 0.14
CACNB3-223ENST00000552480 SRCIN1Q9C0H9 1055 aa15.95■□□□□ 0.14
CACNB3-223ENST00000552480 PTCD1O75127 700 aaKnown RBP15.94■□□□□ 0.14
CACNB3-223ENST00000552480 BEND3Q5T5X7 828 aa15.94■□□□□ 0.14
CACNB3-223ENST00000552480 LRP10Q7Z4F1 713 aa15.94■□□□□ 0.14
CACNB3-223ENST00000552480 RPAP2Q8IXW5 612 aaPredicted RBP15.94■□□□□ 0.14
CACNB3-223ENST00000552480 ANKRD44Q8N8A2 993 aa15.94■□□□□ 0.14
CACNB3-223ENST00000552480 ATG3Q9NT62 314 aa15.94■□□□□ 0.14
CACNB3-223ENST00000552480 ASAP1Q9ULH1 1129 aa15.94■□□□□ 0.14
CACNB3-223ENST00000552480 AFF2P51816 1311 aa15.94■□□□□ 0.14
CACNB3-223ENST00000552480 MYL6BP14649 208 aa15.93■□□□□ 0.14
CACNB3-223ENST00000552480 SKAP1Q86WV1 359 aa15.93■□□□□ 0.14
CACNB3-223ENST00000552480 SIRT2Q8IXJ6 389 aa15.93■□□□□ 0.14
CACNB3-223ENST00000552480 TEX13AQ9BXU3 409 aaPredicted RBP15.93■□□□□ 0.14
CACNB3-223ENST00000552480 PDZRN3Q9UPQ7 1066 aa15.93■□□□□ 0.14
CACNB3-223ENST00000552480 MAP3K2Q9Y2U5 619 aa15.93■□□□□ 0.14
CACNB3-223ENST00000552480 ATRNO75882 1429 aa15.93■□□□□ 0.14
CACNB3-223ENST00000552480 IBTKQ9P2D0 1353 aaPredicted RBP15.92■□□□□ 0.14
CACNB3-223ENST00000552480 ALDH1L1O75891 902 aa15.92■□□□□ 0.14
CACNB3-223ENST00000552480 GNAI2P04899 355 aa15.92■□□□□ 0.14
CACNB3-223ENST00000552480 PRIM1P49642 420 aaKnown RBP15.92■□□□□ 0.14
CACNB3-223ENST00000552480 CEP85Q6P2H3 762 aa15.92■□□□□ 0.14
CACNB3-223ENST00000552480 XAGE3Q8WTP9 111 aa15.92■□□□□ 0.14
CACNB3-223ENST00000552480 GCC1Q96CN9 775 aa15.92■□□□□ 0.14
CACNB3-223ENST00000552480 AIMP1Q12904 312 aaKnown RBP15.91■□□□□ 0.14
CACNB3-223ENST00000552480 SYTL4Q96C24 671 aaPredicted RBP15.91■□□□□ 0.14
CACNB3-223ENST00000552480 TJP1Q07157 1748 aa15.91■□□□□ 0.14
CACNB3-223ENST00000552480 CICQ96RK0 1608 aaPredicted RBP15.9■□□□□ 0.14
CACNB3-223ENST00000552480 COPS6Q7L5N1 327 aa15.9■□□□□ 0.14
CACNB3-223ENST00000552480 RBM42Q9BTD8 480 aaKnown RBP15.9■□□□□ 0.14
CACNB3-223ENST00000552480 USP44Q9H0E7 712 aa15.9■□□□□ 0.14
CACNB3-223ENST00000552480 ARFGEF2Q9Y6D5 1785 aa15.9■□□□□ 0.14
CACNB3-223ENST00000552480 NBPF26B4DH59 902 aa15.89■□□□□ 0.13
CACNB3-223ENST00000552480 UBTFL1P0CB47 393 aaPredicted RBP15.89■□□□□ 0.13
CACNB3-223ENST00000552480 RGS3P49796 1198 aa15.89■□□□□ 0.13
CACNB3-223ENST00000552480 NBPF14Q5TI25 921 aa15.89■□□□□ 0.13
CACNB3-223ENST00000552480 NBPF10Q6P3W6 841 aaKnown RBP15.89■□□□□ 0.13
CACNB3-223ENST00000552480 RIC3Q7Z5B4 369 aa15.89■□□□□ 0.13
CACNB3-223ENST00000552480 NBPF15Q8N660 670 aa15.89■□□□□ 0.13
CACNB3-223ENST00000552480 LINS1Q8NG48 757 aa15.89■□□□□ 0.13
CACNB3-223ENST00000552480 GJD4Q96KN9 370 aaPredicted RBP15.89■□□□□ 0.13
CACNB3-223ENST00000552480 TRPC5Q9UL62 973 aaPredicted RBP15.89■□□□□ 0.13
CACNB3-223ENST00000552480 NUP188Q5SRE5 1749 aa15.88■□□□□ 0.13
CACNB3-223ENST00000552480 HMMRO75330 724 aa15.88■□□□□ 0.13
CACNB3-223ENST00000552480 PIP4K2AP48426 406 aaPredicted RBP15.88■□□□□ 0.13
CACNB3-223ENST00000552480 NUCB1Q02818 461 aa15.88■□□□□ 0.13
CACNB3-223ENST00000552480 ANKRD13DQ6ZTN6 518 aa15.88■□□□□ 0.13
CACNB3-223ENST00000552480 DNAJC10Q8IXB1 793 aa15.88■□□□□ 0.13
CACNB3-223ENST00000552480 ACSBG1Q96GR2 724 aa15.88■□□□□ 0.13
CACNB3-223ENST00000552480 METTL22Q9BUU2 404 aaPredicted RBP15.88■□□□□ 0.13
CACNB3-223ENST00000552480 STARD3NLO95772 234 aa15.87■□□□□ 0.13
CACNB3-223ENST00000552480 A1BGP04217 495 aa15.87■□□□□ 0.13
CACNB3-223ENST00000552480 NEXNQ0ZGT2 675 aa15.87■□□□□ 0.13
CACNB3-223ENST00000552480 PLBD2Q8NHP8 589 aa15.87■□□□□ 0.13
CACNB3-223ENST00000552480 DCTPP1Q9H773 170 aa15.87■□□□□ 0.13
CACNB3-223ENST00000552480 A0A0G2JS52 829 aa15.86■□□□□ 0.13
CACNB3-223ENST00000552480 MYT1Q01538 1121 aa15.86■□□□□ 0.13
CACNB3-223ENST00000552480 HDAC5Q9UQL6 1122 aa15.86■□□□□ 0.13
CACNB3-223ENST00000552480 LRRFIP2Q9Y608 721 aaKnown RBP15.86■□□□□ 0.13
CACNB3-223ENST00000552480 NHSQ6T4R5 1651 aa15.86■□□□□ 0.13
CACNB3-223ENST00000552480 ONECUT3O60422 494 aaPredicted RBP15.85■□□□□ 0.13
CACNB3-223ENST00000552480 ATP8B2P98198 1209 aa15.85■□□□□ 0.13
CACNB3-223ENST00000552480 CHD1LQ86WJ1 897 aa15.85■□□□□ 0.13
CACNB3-223ENST00000552480 SMARCC1Q92922 1105 aaPredicted RBP15.85■□□□□ 0.13
CACNB3-223ENST00000552480 SLC4A9Q96Q91 983 aa15.85■□□□□ 0.13
CACNB3-223ENST00000552480 UTYO14607 1347 aa15.85■□□□□ 0.13
CACNB3-223ENST00000552480 ZNF831Q5JPB2 1677 aa15.85■□□□□ 0.13
CACNB3-223ENST00000552480 IGKV5-2P06315 115 aa15.84■□□□□ 0.13
CACNB3-223ENST00000552480 CYP19A1P11511 503 aaPredicted RBP15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms