RNA–Protein interactions for RNA: ENST00000552211.5

NCKAP1L-208, Transcript of NCK associated protein 1 like, human

TSL 5

Gene NCKAP1L, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCKAP1L-208	ENST00000552211	CCDC24	Q8N4L8	307 aa		13.94	□□□□□ -0.18
NCKAP1L-208	ENST00000552211	PIM2	Q9P1W9	311 aa		13.94	□□□□□ -0.18
NCKAP1L-208	ENST00000552211	ZBTB1	Q9Y2K1	713 aa		13.94	□□□□□ -0.18
NCKAP1L-208	ENST00000552211	FER1L6	Q2WGJ9	1857 aa		13.93	□□□□□ -0.18
NCKAP1L-208	ENST00000552211	HMOX1	P09601	288 aa		13.93	□□□□□ -0.18
NCKAP1L-208	ENST00000552211	NFIX	Q14938	502 aa		13.93	□□□□□ -0.18
NCKAP1L-208	ENST00000552211	DALRD3	Q5D0E6	543 aa	Known RBP	13.93	□□□□□ -0.18
NCKAP1L-208	ENST00000552211	SLX4	Q8IY92	1834 aa		13.92	□□□□□ -0.18
NCKAP1L-208	ENST00000552211	SCN7A	Q01118	1682 aa		13.92	□□□□□ -0.18
NCKAP1L-208	ENST00000552211	CYP19A1	P11511	503 aa	Predicted RBP	13.92	□□□□□ -0.18
NCKAP1L-208	ENST00000552211	RBM46	Q8TBY0	533 aa	Known RBP	13.92	□□□□□ -0.18
NCKAP1L-208	ENST00000552211	HSP90AB1	P08238	724 aa	Known RBP	13.91	□□□□□ -0.18
NCKAP1L-208	ENST00000552211	TRIM26	Q12899	539 aa	Predicted RBP	13.91	□□□□□ -0.18
NCKAP1L-208	ENST00000552211	C1orf141	Q5JVX7	400 aa		13.91	□□□□□ -0.18
NCKAP1L-208	ENST00000552211	MORC1	Q86VD1	984 aa		13.91	□□□□□ -0.18
NCKAP1L-208	ENST00000552211	KLRG1	Q96E93	195 aa		13.91	□□□□□ -0.18
NCKAP1L-208	ENST00000552211	PCGF6	Q9BYE7	350 aa		13.91	□□□□□ -0.18
NCKAP1L-208	ENST00000552211	COL15A1	P39059	1388 aa		13.91	□□□□□ -0.18
NCKAP1L-208	ENST00000552211	PLEKHG2	Q9H7P9	1386 aa		13.91	□□□□□ -0.18
NCKAP1L-208	ENST00000552211	RNMT	O43148	476 aa	Known RBP	13.9	□□□□□ -0.18
NCKAP1L-208	ENST00000552211	CAPN15	O75808	1086 aa		13.9	□□□□□ -0.18
NCKAP1L-208	ENST00000552211	SLC52A2	Q9HAB3	445 aa		13.9	□□□□□ -0.18
NCKAP1L-208	ENST00000552211	POTEC	B2RU33	542 aa		13.89	□□□□□ -0.19
NCKAP1L-208	ENST00000552211	NFKBIE	O00221	500 aa		13.89	□□□□□ -0.19
NCKAP1L-208	ENST00000552211	AMOT	Q4VCS5	1084 aa		13.89	□□□□□ -0.19
NCKAP1L-208	ENST00000552211	BCOR	Q6W2J9	1755 aa		13.88	□□□□□ -0.19
NCKAP1L-208	ENST00000552211	COL3A1	P02461	1466 aa	Predicted RBP	13.88	□□□□□ -0.19
NCKAP1L-208	ENST00000552211	HMGB2	P26583	209 aa	Known RBP	13.88	□□□□□ -0.19
NCKAP1L-208	ENST00000552211	MTHFSD	Q2M296	383 aa	Known RBP	13.88	□□□□□ -0.19
NCKAP1L-208	ENST00000552211	AMER1	Q5JTC6	1135 aa	Predicted RBP	13.88	□□□□□ -0.19
NCKAP1L-208	ENST00000552211	BICDL1	Q6ZP65	573 aa		13.88	□□□□□ -0.19
NCKAP1L-208	ENST00000552211	JMY	Q8N9B5	988 aa		13.88	□□□□□ -0.19
NCKAP1L-208	ENST00000552211	ZNF219	Q9P2Y4	722 aa	Predicted RBP	13.88	□□□□□ -0.19
NCKAP1L-208	ENST00000552211	POTEI	P0CG38	1075 aa		13.87	□□□□□ -0.19
NCKAP1L-208	ENST00000552211	POTEJ	P0CG39	1038 aa		13.87	□□□□□ -0.19
NCKAP1L-208	ENST00000552211	ARFGEF2	Q9Y6D5	1785 aa		13.86	□□□□□ -0.19
NCKAP1L-208	ENST00000552211	SERPINB2	P05120	415 aa		13.86	□□□□□ -0.19
NCKAP1L-208	ENST00000552211	CANX	P27824	592 aa	Known RBP	13.86	□□□□□ -0.19
NCKAP1L-208	ENST00000552211	AKAP4	Q5JQC9	854 aa		13.86	□□□□□ -0.19
NCKAP1L-208	ENST00000552211	NARF	Q9UHQ1	456 aa		13.86	□□□□□ -0.19
NCKAP1L-208	ENST00000552211	KCNQ3	O43525	872 aa		13.85	□□□□□ -0.19
NCKAP1L-208	ENST00000552211	ZPR1	O75312	459 aa		13.85	□□□□□ -0.19
NCKAP1L-208	ENST00000552211	PIP4K2A	P48426	406 aa	Predicted RBP	13.85	□□□□□ -0.19
NCKAP1L-208	ENST00000552211	EIF4G2	P78344	907 aa	Known RBP eCLIP	13.85	□□□□□ -0.19	3e-7	■■■■■ 30.4
NCKAP1L-208	ENST00000552211	CNGB1	Q14028	1251 aa	Predicted RBP	13.85	□□□□□ -0.19
NCKAP1L-208	ENST00000552211	TBC1D9B	Q66K14	1250 aa		13.85	□□□□□ -0.19
NCKAP1L-208	ENST00000552211	C2CD5	Q86YS7	1000 aa		13.84	□□□□□ -0.19
NCKAP1L-208	ENST00000552211	C16orf71	Q8IYS4	520 aa	Predicted RBP	13.84	□□□□□ -0.19
NCKAP1L-208	ENST00000552211	KDM2B	Q8NHM5	1336 aa		13.84	□□□□□ -0.19
NCKAP1L-208	ENST00000552211	FSTL1	Q12841	308 aa		13.83	□□□□□ -0.2
NCKAP1L-208	ENST00000552211	SLC51A	Q86UW1	340 aa		13.83	□□□□□ -0.2
NCKAP1L-208	ENST00000552211	ZNF496	Q96IT1	587 aa	Predicted RBP	13.83	□□□□□ -0.2
NCKAP1L-208	ENST00000552211	KIF7	Q2M1P5	1343 aa		13.83	□□□□□ -0.2
NCKAP1L-208	ENST00000552211	PRAMEF22	A3QJZ6	481 aa		13.82	□□□□□ -0.2
NCKAP1L-208	ENST00000552211	CC2D1B	Q5T0F9	858 aa	Known RBP	13.82	□□□□□ -0.2
NCKAP1L-208	ENST00000552211	IL17RE	Q8NFR9	667 aa		13.82	□□□□□ -0.2
NCKAP1L-208	ENST00000552211	TBC1D2B	Q9UPU7	963 aa		13.82	□□□□□ -0.2
NCKAP1L-208	ENST00000552211	GLTPD2	A6NH11	291 aa		13.81	□□□□□ -0.2
NCKAP1L-208	ENST00000552211	LMNB1	P20700	586 aa		13.81	□□□□□ -0.2
NCKAP1L-208	ENST00000552211	EIF5	P55010	431 aa	Known RBP	13.81	□□□□□ -0.2
NCKAP1L-208	ENST00000552211	OLFM4	Q6UX06	510 aa		13.81	□□□□□ -0.2
NCKAP1L-208	ENST00000552211	PER1	O15534	1290 aa	Predicted RBP	13.8	□□□□□ -0.2
NCKAP1L-208	ENST00000552211	C21orf2	O43822	256 aa		13.8	□□□□□ -0.2
NCKAP1L-208	ENST00000552211	A1BG	P04217	495 aa		13.8	□□□□□ -0.2
NCKAP1L-208	ENST00000552211	HSPA1A	P0DMV8	641 aa	Known RBP	13.8	□□□□□ -0.2
NCKAP1L-208	ENST00000552211	HSPA1B	P0DMV9	641 aa	Known RBP	13.8	□□□□□ -0.2
NCKAP1L-208	ENST00000552211	PRR5L	Q6MZQ0	368 aa		13.8	□□□□□ -0.2
NCKAP1L-208	ENST00000552211	TTLL6	Q8N841	843 aa		13.8	□□□□□ -0.2
NCKAP1L-208	ENST00000552211	SMC1B	Q8NDV3	1235 aa		13.8	□□□□□ -0.2
NCKAP1L-208	ENST00000552211	ZNF330	Q9Y3S2	320 aa	Predicted RBP	13.8	□□□□□ -0.2
NCKAP1L-208	ENST00000552211	KNSTRN	Q9Y448	316 aa		13.8	□□□□□ -0.2
NCKAP1L-208	ENST00000552211	ZNF622	Q969S3	477 aa	Known RBP eCLIP	13.79	□□□□□ -0.2
NCKAP1L-208	ENST00000552211	PHACTR3	Q96KR7	559 aa		13.78	□□□□□ -0.2
NCKAP1L-208	ENST00000552211	TIMELESS	Q9UNS1	1208 aa		13.78	□□□□□ -0.2
NCKAP1L-208	ENST00000552211	HEG1	Q9ULI3	1381 aa		13.78	□□□□□ -0.2
NCKAP1L-208	ENST00000552211	DLG5	Q8TDM6	1919 aa		13.78	□□□□□ -0.2
NCKAP1L-208	ENST00000552211	DDN	O94850	711 aa	Predicted RBP	13.77	□□□□□ -0.21
NCKAP1L-208	ENST00000552211	CAMTA2	O94983	1202 aa		13.77	□□□□□ -0.21
NCKAP1L-208	ENST00000552211	COL4A5	P29400	1685 aa		13.77	□□□□□ -0.21
NCKAP1L-208	ENST00000552211	TNS4	Q8IZW8	715 aa		13.77	□□□□□ -0.21
NCKAP1L-208	ENST00000552211	ADAMTSL1	Q8N6G6	1762 aa		13.76	□□□□□ -0.21
NCKAP1L-208	ENST00000552211		H0YIN7	160 aa		13.76	□□□□□ -0.21
NCKAP1L-208	ENST00000552211	VEGFA	P15692	232 aa	Predicted RBP	13.76	□□□□□ -0.21
NCKAP1L-208	ENST00000552211	LTBP1	Q14766	1721 aa		13.76	□□□□□ -0.21
NCKAP1L-208	ENST00000552211	DIAPH1	O60610	1272 aa	Known RBP	13.75	□□□□□ -0.21
NCKAP1L-208	ENST00000552211	ZNF790	Q6PG37	636 aa		13.75	□□□□□ -0.21
NCKAP1L-208	ENST00000552211	MKRN1	Q9UHC7	482 aa	Known RBP	13.75	□□□□□ -0.21
NCKAP1L-208	ENST00000552211	VSIG10	Q8N0Z9	540 aa		13.74	□□□□□ -0.21
NCKAP1L-208	ENST00000552211	USP16	Q9Y5T5	823 aa		13.74	□□□□□ -0.21
NCKAP1L-208	ENST00000552211	SCN4A	P35499	1836 aa		13.74	□□□□□ -0.21
NCKAP1L-208	ENST00000552211	NUP98	P52948	1817 aa		13.74	□□□□□ -0.21
NCKAP1L-208	ENST00000552211	ZNF541	Q9H0D2	1346 aa		13.73	□□□□□ -0.21
NCKAP1L-208	ENST00000552211	ZC3H4	Q9UPT8	1303 aa	Known RBP	13.73	□□□□□ -0.21
NCKAP1L-208	ENST00000552211	U2SURP	O15042	1029 aa	Known RBP	13.73	□□□□□ -0.21
NCKAP1L-208	ENST00000552211	ERFE	Q4G0M1	354 aa		13.73	□□□□□ -0.21
NCKAP1L-208	ENST00000552211	PRPF40B	Q6NWY9	871 aa	Known RBP	13.73	□□□□□ -0.21
NCKAP1L-208	ENST00000552211	CEMIP	Q8WUJ3	1361 aa		13.72	□□□□□ -0.21
NCKAP1L-208	ENST00000552211	CLSPN	Q9HAW4	1339 aa		13.72	□□□□□ -0.21
NCKAP1L-208	ENST00000552211	DCTN1	Q14203	1278 aa		13.72	□□□□□ -0.21
NCKAP1L-208	ENST00000552211	BRIP1	Q9BX63	1249 aa		13.72	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms