RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 NFATC2IPQ8NCF5 419 aa17.33■□□□□ 0.37
RAB3IP-216ENST00000552199 DCAF5Q96JK2 942 aa17.33■□□□□ 0.37
RAB3IP-216ENST00000552199 CYP27B1O15528 508 aa17.33■□□□□ 0.36
RAB3IP-216ENST00000552199 PDE1AP54750 535 aa17.33■□□□□ 0.36
RAB3IP-216ENST00000552199 SLC39A6Q13433 755 aa17.33■□□□□ 0.36
RAB3IP-216ENST00000552199 KSR2Q6VAB6 950 aa17.33■□□□□ 0.36
RAB3IP-216ENST00000552199 POLA2Q14181 598 aa17.32■□□□□ 0.36
RAB3IP-216ENST00000552199 DDX21Q9NR30 783 aaKnown RBP eCLIP17.32■□□□□ 0.36
RAB3IP-216ENST00000552199 MRC1P22897 1456 aa17.32■□□□□ 0.36
RAB3IP-216ENST00000552199 SALL3Q9BXA9 1300 aa17.32■□□□□ 0.36
RAB3IP-216ENST00000552199 HSP90AB1P08238 724 aaKnown RBP17.31■□□□□ 0.36
RAB3IP-216ENST00000552199 NBPF7P0C2Y1 421 aaPredicted RBP17.31■□□□□ 0.36
RAB3IP-216ENST00000552199 PRDM11Q9NQV5 511 aa17.31■□□□□ 0.36
RAB3IP-216ENST00000552199 MAP3K2Q9Y2U5 619 aa17.31■□□□□ 0.36
RAB3IP-216ENST00000552199 C5P01031 1676 aa17.31■□□□□ 0.36
RAB3IP-216ENST00000552199 ALDH1L1O75891 902 aa17.31■□□□□ 0.36
RAB3IP-216ENST00000552199 PPP1R42Q7Z4L9 355 aa17.31■□□□□ 0.36
RAB3IP-216ENST00000552199 ANTXR1Q9H6X2 564 aa17.31■□□□□ 0.36
RAB3IP-216ENST00000552199 PDIA6Q15084 440 aa17.3■□□□□ 0.36
RAB3IP-216ENST00000552199 KIF2CQ99661 725 aa17.3■□□□□ 0.36
RAB3IP-216ENST00000552199 WDR17Q8IZU2 1322 aa17.3■□□□□ 0.36
RAB3IP-216ENST00000552199 SNX21Q969T3 373 aa17.29■□□□□ 0.36
RAB3IP-216ENST00000552199 SLKQ9H2G2 1235 aaPredicted RBP17.29■□□□□ 0.36
RAB3IP-216ENST00000552199 RAB11FIP3O75154 756 aa17.29■□□□□ 0.36
RAB3IP-216ENST00000552199 HSCBQ8IWL3 235 aa17.29■□□□□ 0.36
RAB3IP-216ENST00000552199 ABCA3Q99758 1704 aa17.29■□□□□ 0.36
RAB3IP-216ENST00000552199 PARP4Q9UKK3 1724 aaKnown RBP17.29■□□□□ 0.36
RAB3IP-216ENST00000552199 DDX58O95786 925 aaKnown RBP17.28■□□□□ 0.36
RAB3IP-216ENST00000552199 CASC1Q6TDU7 716 aa17.28■□□□□ 0.36
RAB3IP-216ENST00000552199 SRGAP3O43295 1099 aa17.27■□□□□ 0.36
RAB3IP-216ENST00000552199 ZNF496Q96IT1 587 aaPredicted RBP17.27■□□□□ 0.36
RAB3IP-216ENST00000552199 STAP2Q9UGK3 403 aa17.27■□□□□ 0.36
RAB3IP-216ENST00000552199 TUBGCP6Q96RT7 1819 aa17.27■□□□□ 0.36
RAB3IP-216ENST00000552199 COL5A2P05997 1499 aaPredicted RBP17.27■□□□□ 0.35
RAB3IP-216ENST00000552199 MX1P20591 662 aa17.27■□□□□ 0.35
RAB3IP-216ENST00000552199 DEKP35659 375 aaKnown RBP17.27■□□□□ 0.35
RAB3IP-216ENST00000552199 TOM1L2Q6ZVM7 507 aa17.27■□□□□ 0.35
RAB3IP-216ENST00000552199 SURF6O75683 361 aaKnown RBP17.26■□□□□ 0.35
RAB3IP-216ENST00000552199 CABP4P57796 275 aa17.26■□□□□ 0.35
RAB3IP-216ENST00000552199 TTC5Q8N0Z6 440 aa17.26■□□□□ 0.35
RAB3IP-216ENST00000552199 LINS1Q8NG48 757 aa17.26■□□□□ 0.35
RAB3IP-216ENST00000552199 C9orf78Q9NZ63 289 aaPredicted RBP17.26■□□□□ 0.35
RAB3IP-216ENST00000552199 HDAC5Q9UQL6 1122 aa17.26■□□□□ 0.35
RAB3IP-216ENST00000552199 NHSL1Q5SYE7 1610 aa17.26■□□□□ 0.35
RAB3IP-216ENST00000552199 SNRPA1P09661 255 aaKnown RBP17.25■□□□□ 0.35
RAB3IP-216ENST00000552199 AIMP1Q12904 312 aaKnown RBP17.25■□□□□ 0.35
RAB3IP-216ENST00000552199 MTX1Q13505 466 aa17.25■□□□□ 0.35
RAB3IP-216ENST00000552199 ZCRB1Q8TBF4 217 aaKnown RBP17.25■□□□□ 0.35
RAB3IP-216ENST00000552199 USP26Q9BXU7 913 aa17.25■□□□□ 0.35
RAB3IP-216ENST00000552199 FMNL2Q96PY5 1086 aa17.25■□□□□ 0.35
RAB3IP-216ENST00000552199 FRAT2O75474 233 aaPredicted RBP17.24■□□□□ 0.35
RAB3IP-216ENST00000552199 CWF19L2Q2TBE0 894 aaKnown RBP17.24■□□□□ 0.35
RAB3IP-216ENST00000552199 SPRYD3Q8NCJ5 442 aa17.24■□□□□ 0.35
RAB3IP-216ENST00000552199 RHPN1Q8TCX5 695 aa17.24■□□□□ 0.35
RAB3IP-216ENST00000552199 CARD10Q9BWT7 1032 aa17.24■□□□□ 0.35
RAB3IP-216ENST00000552199 AOX1Q06278 1338 aa17.24■□□□□ 0.35
RAB3IP-216ENST00000552199 HSP90AB4PQ58FF6 505 aa17.23■□□□□ 0.35
RAB3IP-216ENST00000552199 TSHZ3Q63HK5 1081 aa17.23■□□□□ 0.35
RAB3IP-216ENST00000552199 USP16Q9Y5T5 823 aa17.23■□□□□ 0.35
RAB3IP-216ENST00000552199 UTYO14607 1347 aa17.23■□□□□ 0.35
RAB3IP-216ENST00000552199 PCDH11XQ9BZA7 1347 aa17.23■□□□□ 0.35
RAB3IP-216ENST00000552199 PCDH11YQ9BZA8 1340 aa17.23■□□□□ 0.35
RAB3IP-216ENST00000552199 MYL6BP14649 208 aa17.23■□□□□ 0.35
RAB3IP-216ENST00000552199 LARP1Q6PKG0 1096 aaKnown RBP17.23■□□□□ 0.35
RAB3IP-216ENST00000552199 RIC3Q7Z5B4 369 aa17.23■□□□□ 0.35
RAB3IP-216ENST00000552199 KIF1BPQ96EK5 621 aa17.23■□□□□ 0.35
RAB3IP-216ENST00000552199 IL1RAPL2Q9NP60 686 aa17.23■□□□□ 0.35
RAB3IP-216ENST00000552199 XAGE3Q8WTP9 111 aa17.22■□□□□ 0.35
RAB3IP-216ENST00000552199 GRM8O00222 908 aa17.21■□□□□ 0.35
RAB3IP-216ENST00000552199 ERC2O15083 957 aa17.21■□□□□ 0.35
RAB3IP-216ENST00000552199 REC8O95072 547 aa17.21■□□□□ 0.35
RAB3IP-216ENST00000552199 COPS6Q7L5N1 327 aa17.21■□□□□ 0.35
RAB3IP-216ENST00000552199 IGKV5-2P06315 115 aa17.21■□□□□ 0.35
RAB3IP-216ENST00000552199 IL2RBP14784 551 aa17.21■□□□□ 0.35
RAB3IP-216ENST00000552199 LRP10Q7Z4F1 713 aa17.21■□□□□ 0.35
RAB3IP-216ENST00000552199 ERVV-2B6SEH9 535 aa17.2■□□□□ 0.34
RAB3IP-216ENST00000552199 NKX1-1Q15270 411 aaPredicted RBP17.2■□□□□ 0.34
RAB3IP-216ENST00000552199 NUTM1Q86Y26 1132 aa17.2■□□□□ 0.34
RAB3IP-216ENST00000552199 RBM42Q9BTD8 480 aaKnown RBP17.2■□□□□ 0.34
RAB3IP-216ENST00000552199 CHMP5Q9NZZ3 219 aa17.2■□□□□ 0.34
RAB3IP-216ENST00000552199 GLI3P10071 1580 aa17.2■□□□□ 0.34
RAB3IP-216ENST00000552199 LAMB4A4D0S4 1761 aa17.2■□□□□ 0.34
RAB3IP-216ENST00000552199 EVA1CP58658 441 aa17.19■□□□□ 0.34
RAB3IP-216ENST00000552199 NEXNQ0ZGT2 675 aa17.19■□□□□ 0.34
RAB3IP-216ENST00000552199 SUCLG2Q96I99 432 aa17.19■□□□□ 0.34
RAB3IP-216ENST00000552199 METTL22Q9BUU2 404 aaPredicted RBP17.19■□□□□ 0.34
RAB3IP-216ENST00000552199 RABEP1Q15276 862 aa17.19■□□□□ 0.34
RAB3IP-216ENST00000552199 STRN4Q9NRL3 753 aa17.19■□□□□ 0.34
RAB3IP-216ENST00000552199 SHANK3Q9BYB0 1731 aa17.18■□□□□ 0.34
RAB3IP-216ENST00000552199 NEURL1BA8MQ27 555 aa17.18■□□□□ 0.34
RAB3IP-216ENST00000552199 TRIM6-TRIM34B2RNG4 842 aa17.18■□□□□ 0.34
RAB3IP-216ENST00000552199 CD2BP2O95400 341 aaKnown RBP17.18■□□□□ 0.34
RAB3IP-216ENST00000552199 ANKRD13DQ6ZTN6 518 aa17.18■□□□□ 0.34
RAB3IP-216ENST00000552199 RILPL2Q969X0 211 aa17.18■□□□□ 0.34
RAB3IP-216ENST00000552199 KAZALD1Q96I82 304 aa17.18■□□□□ 0.34
RAB3IP-216ENST00000552199 CHMLP26374 656 aa17.17■□□□□ 0.34
RAB3IP-216ENST00000552199 ESYT1Q9BSJ8 1104 aa17.17■□□□□ 0.34
RAB3IP-216ENST00000552199 K7ELQ4 463 aaPredicted RBP17.17■□□□□ 0.34
RAB3IP-216ENST00000552199 DDIT3P35638 169 aa17.17■□□□□ 0.34
RAB3IP-216ENST00000552199 OS9Q13438 667 aaPredicted RBP17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms