RNA–Protein interactions for RNA: ENST00000552089.5

RBFOX1-214, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 1,430 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-214ENST00000552089 SMG6Q86US8 1419 aaKnown RBP16.19■□□□□ 0.18
RBFOX1-214ENST00000552089 KIF7Q2M1P5 1343 aa16.19■□□□□ 0.18
RBFOX1-214ENST00000552089 IQCA1LA6NCM1 817 aa16.19■□□□□ 0.18
RBFOX1-214ENST00000552089 RPS6KA4O75676 772 aa16.19■□□□□ 0.18
RBFOX1-214ENST00000552089 PAXIP1Q6ZW49 1069 aaPredicted RBP16.19■□□□□ 0.18
RBFOX1-214ENST00000552089 TAF1DQ9H5J8 278 aaPredicted RBP16.19■□□□□ 0.18
RBFOX1-214ENST00000552089 CNTNAP4Q9C0A0 1308 aa16.18■□□□□ 0.18
RBFOX1-214ENST00000552089 GRM1Q13255 1194 aa16.18■□□□□ 0.18
RBFOX1-214ENST00000552089 EAPPQ56P03 285 aaPredicted RBP16.18■□□□□ 0.18
RBFOX1-214ENST00000552089 RC3H1Q5TC82 1133 aaKnown RBP16.18■□□□□ 0.18
RBFOX1-214ENST00000552089 HDGFL2Q7Z4V5 671 aaPredicted RBP16.18■□□□□ 0.18
RBFOX1-214ENST00000552089 TTLL6Q8N841 843 aa16.18■□□□□ 0.18
RBFOX1-214ENST00000552089 CAPNS2Q96L46 248 aa16.18■□□□□ 0.18
RBFOX1-214ENST00000552089 ATG3Q9NT62 314 aa16.18■□□□□ 0.18
RBFOX1-214ENST00000552089 CCDC88AQ3V6T2 1871 aa16.17■□□□□ 0.18
RBFOX1-214ENST00000552089 RTL1A6NKG5 1358 aa16.17■□□□□ 0.18
RBFOX1-214ENST00000552089 POLRMTO00411 1230 aaKnown RBP16.17■□□□□ 0.18
RBFOX1-214ENST00000552089 FBLN1P23142 703 aa16.17■□□□□ 0.18
RBFOX1-214ENST00000552089 CDCA8Q53HL2 280 aa16.17■□□□□ 0.18
RBFOX1-214ENST00000552089 NKX1-1Q15270 411 aaPredicted RBP16.16■□□□□ 0.18
RBFOX1-214ENST00000552089 GPR101Q96P66 508 aaPredicted RBP16.16■□□□□ 0.18
RBFOX1-214ENST00000552089 USP42Q9H9J4 1324 aaKnown RBP16.15■□□□□ 0.18
RBFOX1-214ENST00000552089 ECE1P42892 770 aa16.15■□□□□ 0.18
RBFOX1-214ENST00000552089 SLC4A9Q96Q91 983 aa16.15■□□□□ 0.18
RBFOX1-214ENST00000552089 CLEC11AQ9Y240 323 aa16.15■□□□□ 0.18
RBFOX1-214ENST00000552089 TMC1Q8TDI8 760 aa16.14■□□□□ 0.17
RBFOX1-214ENST00000552089 GCC1Q96CN9 775 aa16.14■□□□□ 0.17
RBFOX1-214ENST00000552089 CYP4F22Q6NT55 531 aa16.13■□□□□ 0.17
RBFOX1-214ENST00000552089 DLEC1Q9Y238 1755 aa16.13■□□□□ 0.17
RBFOX1-214ENST00000552089 COL5A3P25940 1745 aaPredicted RBP16.12■□□□□ 0.17
RBFOX1-214ENST00000552089 CNTROBQ8N137 903 aa16.12■□□□□ 0.17
RBFOX1-214ENST00000552089 COG3Q96JB2 828 aa16.12■□□□□ 0.17
RBFOX1-214ENST00000552089 L3MBTL3Q96JM7 780 aaPredicted RBP16.12■□□□□ 0.17
RBFOX1-214ENST00000552089 RBM42Q9BTD8 480 aaKnown RBP16.12■□□□□ 0.17
RBFOX1-214ENST00000552089 A0A1W2PP64 1363 aa16.12■□□□□ 0.17
RBFOX1-214ENST00000552089 CA12O43570 354 aa16.11■□□□□ 0.17
RBFOX1-214ENST00000552089 MAP1SQ66K74 1059 aaPredicted RBP16.11■□□□□ 0.17
RBFOX1-214ENST00000552089 C2CD5Q86YS7 1000 aa16.11■□□□□ 0.17
RBFOX1-214ENST00000552089 YTHDC1Q96MU7 727 aaKnown RBP16.11■□□□□ 0.17
RBFOX1-214ENST00000552089 SLC12A5Q9H2X9 1139 aa16.11■□□□□ 0.17
RBFOX1-214ENST00000552089 PRKRIP1Q9H875 184 aaPredicted RBP16.11■□□□□ 0.17
RBFOX1-214ENST00000552089 TM4SF1P30408 202 aa16.11■□□□□ 0.17
RBFOX1-214ENST00000552089 RRS1Q15050 365 aaKnown RBP16.11■□□□□ 0.17
RBFOX1-214ENST00000552089 DICER1Q9UPY3 1922 aaKnown RBP16.1■□□□□ 0.17
RBFOX1-214ENST00000552089 ADAMTSL1Q8N6G6 1762 aa16.1■□□□□ 0.17
RBFOX1-214ENST00000552089 AOC2O75106 756 aa16.1■□□□□ 0.17
RBFOX1-214ENST00000552089 ZNF831Q5JPB2 1677 aa16.09■□□□□ 0.17
RBFOX1-214ENST00000552089 SCN4AP35499 1836 aa16.09■□□□□ 0.17
RBFOX1-214ENST00000552089 C21orf2O43822 256 aa16.09■□□□□ 0.17
RBFOX1-214ENST00000552089 TAOK3Q9H2K8 898 aa16.09■□□□□ 0.17
RBFOX1-214ENST00000552089 SPG7Q9UQ90 795 aa16.09■□□□□ 0.17
RBFOX1-214ENST00000552089 CASP8AP2Q9UKL3 1982 aa16.08■□□□□ 0.16
RBFOX1-214ENST00000552089 H0YIN7 160 aa16.08■□□□□ 0.16
RBFOX1-214ENST00000552089 HABP4Q5JVS0 413 aaKnown RBP16.08■□□□□ 0.16
RBFOX1-214ENST00000552089 PUS7Q96PZ0 661 aaKnown RBP16.08■□□□□ 0.16
RBFOX1-214ENST00000552089 DDX21Q9NR30 783 aaKnown RBP eCLIP16.08■□□□□ 0.16
RBFOX1-214ENST00000552089 TERF2IPQ9NYB0 399 aa16.08■□□□□ 0.16
RBFOX1-214ENST00000552089 HACL1Q9UJ83 578 aa16.08■□□□□ 0.16
RBFOX1-214ENST00000552089 LTBP3Q9NS15 1303 aa16.07■□□□□ 0.16
RBFOX1-214ENST00000552089 EPHX2P34913 555 aa16.07■□□□□ 0.16
RBFOX1-214ENST00000552089 MAP2K2P36507 400 aa16.07■□□□□ 0.16
RBFOX1-214ENST00000552089 RALBP1Q15311 655 aa16.07■□□□□ 0.16
RBFOX1-214ENST00000552089 CRKLP46109 303 aaKnown RBP16.06■□□□□ 0.16
RBFOX1-214ENST00000552089 CARMIL3Q8ND23 1372 aa16.05■□□□□ 0.16
RBFOX1-214ENST00000552089 MYH14Q7Z406 1995 aaKnown RBP16.05■□□□□ 0.16
RBFOX1-214ENST00000552089 NBPF15Q8N660 670 aa16.05■□□□□ 0.16
RBFOX1-214ENST00000552089 INSRP06213 1382 aa16.05■□□□□ 0.16
RBFOX1-214ENST00000552089 FER1L6Q2WGJ9 1857 aa16.04■□□□□ 0.16
RBFOX1-214ENST00000552089 HSP90AB2PQ58FF8 381 aa16.04■□□□□ 0.16
RBFOX1-214ENST00000552089 USPL1Q5W0Q7 1092 aa16.04■□□□□ 0.16
RBFOX1-214ENST00000552089 PNMA8AQ86V59 439 aaPredicted RBP16.04■□□□□ 0.16
RBFOX1-214ENST00000552089 POLR3GLQ9BT43 218 aa16.04■□□□□ 0.16
RBFOX1-214ENST00000552089 NFIXQ14938 502 aa16.03■□□□□ 0.16
RBFOX1-214ENST00000552089 ZNF622Q969S3 477 aaKnown RBP eCLIP16.03■□□□□ 0.16
RBFOX1-214ENST00000552089 ZNF541Q9H0D2 1346 aa16.03■□□□□ 0.16
RBFOX1-214ENST00000552089 NRXN2Q9P2S2 1712 aa16.03■□□□□ 0.16
RBFOX1-214ENST00000552089 AFDNP55196 1824 aaKnown RBP16.03■□□□□ 0.16
RBFOX1-214ENST00000552089 ZPR1O75312 459 aa16.02■□□□□ 0.16
RBFOX1-214ENST00000552089 PHKG2P15735 406 aa16.02■□□□□ 0.16
RBFOX1-214ENST00000552089 BRPF1P55201 1214 aaPredicted RBP16.02■□□□□ 0.16
RBFOX1-214ENST00000552089 FMR1Q06787 632 aaKnown RBP eCLIP16.02■□□□□ 0.16
RBFOX1-214ENST00000552089 SERPINB2P05120 415 aa16.02■□□□□ 0.15
RBFOX1-214ENST00000552089 IFNL2Q8IZJ0 200 aa16.02■□□□□ 0.15
RBFOX1-214ENST00000552089 GTF3C3Q9Y5Q9 886 aa16.02■□□□□ 0.15
RBFOX1-214ENST00000552089 TLL2Q9Y6L7 1015 aa16.02■□□□□ 0.15
RBFOX1-214ENST00000552089 RNF123Q5XPI4 1314 aa16.01■□□□□ 0.15
RBFOX1-214ENST00000552089 DLL1O00548 723 aa16.01■□□□□ 0.15
RBFOX1-214ENST00000552089 ADAMTS7Q9UKP4 1686 aa16.01■□□□□ 0.15
RBFOX1-214ENST00000552089 FLT4P35916 1363 aa16■□□□□ 0.15
RBFOX1-214ENST00000552089 NCAPD2Q15021 1401 aa16■□□□□ 0.15
RBFOX1-214ENST00000552089 CIAPIN1Q6FI81 312 aa15.99■□□□□ 0.15
RBFOX1-214ENST00000552089 PTCD1O75127 700 aaKnown RBP15.98■□□□□ 0.15
RBFOX1-214ENST00000552089 CST9Q5W186 159 aa15.98■□□□□ 0.15
RBFOX1-214ENST00000552089 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.98■□□□□ 0.15
RBFOX1-214ENST00000552089 FXR1P51114 621 aaKnown RBP eCLIP15.97■□□□□ 0.15
RBFOX1-214ENST00000552089 TRAF5O00463 557 aa15.96■□□□□ 0.15
RBFOX1-214ENST00000552089 INTS5Q6P9B9 1019 aaKnown RBP15.96■□□□□ 0.15
RBFOX1-214ENST00000552089 COL11A2P13942 1736 aaPredicted RBP15.96■□□□□ 0.15
RBFOX1-214ENST00000552089 ERVV-2B6SEH9 535 aa15.95■□□□□ 0.14
RBFOX1-214ENST00000552089 CARD14Q9BXL6 1004 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms