RNA–Protein interactions for RNA: ENST00000551355.5

NEK3-203, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-203ENST00000551355 AAMPQ13685 434 aa13.24□□□□□ -0.29
NEK3-203ENST00000551355 DZIP1LQ8IYY4 767 aaKnown RBP13.24□□□□□ -0.29
NEK3-203ENST00000551355 CHMP4BQ9H444 224 aaKnown RBP13.24□□□□□ -0.29
NEK3-203ENST00000551355 CHPF2Q9P2E5 772 aa13.24□□□□□ -0.29
NEK3-203ENST00000551355 USP16Q9Y5T5 823 aa13.24□□□□□ -0.29
NEK3-203ENST00000551355 RGS12O14924 1447 aa13.23□□□□□ -0.29
NEK3-203ENST00000551355 PLIN1O60240 522 aa13.23□□□□□ -0.29
NEK3-203ENST00000551355 DDX58O95786 925 aaKnown RBP13.23□□□□□ -0.29
NEK3-203ENST00000551355 TRIM27P14373 513 aa13.23□□□□□ -0.29
NEK3-203ENST00000551355 FLIIQ13045 1269 aa13.23□□□□□ -0.29
NEK3-203ENST00000551355 NECTIN2Q92692 538 aa13.23□□□□□ -0.29
NEK3-203ENST00000551355 UBR2Q8IWV8 1755 aa13.22□□□□□ -0.29
NEK3-203ENST00000551355 PRAMEF22A3QJZ6 481 aa13.22□□□□□ -0.29
NEK3-203ENST00000551355 TCERG1O14776 1098 aaKnown RBP13.22□□□□□ -0.29
NEK3-203ENST00000551355 ATP6V1AP38606 617 aa13.22□□□□□ -0.29
NEK3-203ENST00000551355 FKBP8Q14318 412 aa13.22□□□□□ -0.29
NEK3-203ENST00000551355 FAM182BQ5T319 152 aa13.22□□□□□ -0.29
NEK3-203ENST00000551355 NHSQ6T4R5 1651 aa13.21□□□□□ -0.29
NEK3-203ENST00000551355 ITGB4P16144 1822 aa13.21□□□□□ -0.29
NEK3-203ENST00000551355 FKBP5Q13451 457 aaPredicted RBP13.21□□□□□ -0.29
NEK3-203ENST00000551355 PDIA6Q15084 440 aa13.21□□□□□ -0.29
NEK3-203ENST00000551355 DNAJC10Q8IXB1 793 aa13.21□□□□□ -0.29
NEK3-203ENST00000551355 CYP19A1P11511 503 aaPredicted RBP13.2□□□□□ -0.3
NEK3-203ENST00000551355 SLC27A3Q5K4L6 730 aa13.2□□□□□ -0.3
NEK3-203ENST00000551355 NPM2Q86SE8 214 aaKnown RBP13.2□□□□□ -0.3
NEK3-203ENST00000551355 GTF3C3Q9Y5Q9 886 aa13.2□□□□□ -0.3
NEK3-203ENST00000551355 ABCC4O15439 1325 aa13.19□□□□□ -0.3
NEK3-203ENST00000551355 TRIM37O94972 964 aa13.19□□□□□ -0.3
NEK3-203ENST00000551355 CCT4P50991 539 aaKnown RBP13.19□□□□□ -0.3
NEK3-203ENST00000551355 SLC4A9Q96Q91 983 aa13.19□□□□□ -0.3
NEK3-203ENST00000551355 DDX19BQ9UMR2 479 aa13.19□□□□□ -0.3
NEK3-203ENST00000551355 PLSCR1O15162 318 aa13.18□□□□□ -0.3
NEK3-203ENST00000551355 MVPQ14764 893 aaKnown RBP13.18□□□□□ -0.3
NEK3-203ENST00000551355 RC3H1Q5TC82 1133 aaKnown RBP13.18□□□□□ -0.3
NEK3-203ENST00000551355 C20orf194Q5TEA3 1177 aa13.18□□□□□ -0.3
NEK3-203ENST00000551355 INTS3Q68E01 1043 aaKnown RBP13.18□□□□□ -0.3
NEK3-203ENST00000551355 KSR2Q6VAB6 950 aa13.18□□□□□ -0.3
NEK3-203ENST00000551355 G2E3Q7L622 706 aa13.18□□□□□ -0.3
NEK3-203ENST00000551355 CLUAP1Q96AJ1 413 aa13.18□□□□□ -0.3
NEK3-203ENST00000551355 CCNL1Q9UK58 526 aaPredicted RBP13.18□□□□□ -0.3
NEK3-203ENST00000551355 ZNF831Q5JPB2 1677 aa13.18□□□□□ -0.3
NEK3-203ENST00000551355 A1BGP04217 495 aa13.17□□□□□ -0.3
NEK3-203ENST00000551355 MYL6BP14649 208 aa13.17□□□□□ -0.3
NEK3-203ENST00000551355 IL6STP40189 918 aaPredicted RBP13.17□□□□□ -0.3
NEK3-203ENST00000551355 IRX6P78412 446 aaPredicted RBP13.17□□□□□ -0.3
NEK3-203ENST00000551355 PROSER3Q2NL68 480 aa13.17□□□□□ -0.3
NEK3-203ENST00000551355 LRP10Q7Z4F1 713 aa13.17□□□□□ -0.3
NEK3-203ENST00000551355 PANK1Q8TE04 598 aa13.17□□□□□ -0.3
NEK3-203ENST00000551355 PHAXQ9H814 394 aaKnown RBP13.17□□□□□ -0.3
NEK3-203ENST00000551355 CCDC87Q9NVE4 849 aa13.17□□□□□ -0.3
NEK3-203ENST00000551355 CICQ96RK0 1608 aaPredicted RBP13.17□□□□□ -0.3
NEK3-203ENST00000551355 CNTNAP4Q9C0A0 1308 aa13.16□□□□□ -0.3
NEK3-203ENST00000551355 NBPF26B4DH59 902 aa13.16□□□□□ -0.3
NEK3-203ENST00000551355 RLBP1P12271 317 aa13.16□□□□□ -0.3
NEK3-203ENST00000551355 NBPF14Q5TI25 921 aa13.16□□□□□ -0.3
NEK3-203ENST00000551355 NBPF10Q6P3W6 841 aaKnown RBP13.16□□□□□ -0.3
NEK3-203ENST00000551355 ANKRD13DQ6ZTN6 518 aa13.16□□□□□ -0.3
NEK3-203ENST00000551355 COPS6Q7L5N1 327 aa13.16□□□□□ -0.3
NEK3-203ENST00000551355 PTF1AQ7RTS3 328 aa13.16□□□□□ -0.3
NEK3-203ENST00000551355 ITPRIPQ8IWB1 547 aa13.16□□□□□ -0.3
NEK3-203ENST00000551355 NBPF15Q8N660 670 aa13.16□□□□□ -0.3
NEK3-203ENST00000551355 XAGE3Q8WTP9 111 aa13.16□□□□□ -0.3
NEK3-203ENST00000551355 DNAAF4Q8WXU2 420 aa13.16□□□□□ -0.3
NEK3-203ENST00000551355 CRBNQ96SW2 442 aa13.16□□□□□ -0.3
NEK3-203ENST00000551355 COG6Q9Y2V7 657 aa13.16□□□□□ -0.3
NEK3-203ENST00000551355 LAMB4A4D0S4 1761 aa13.16□□□□□ -0.3
NEK3-203ENST00000551355 PXDNLA1KZ92 1463 aa13.16□□□□□ -0.3
NEK3-203ENST00000551355 A0A087WZG4 1122 aa13.15□□□□□ -0.3
NEK3-203ENST00000551355 PI4KAP2A4QPH2 592 aa13.15□□□□□ -0.3
NEK3-203ENST00000551355 ANXA1P04083 346 aa13.15□□□□□ -0.3
NEK3-203ENST00000551355 CRKLP46109 303 aaKnown RBP13.15□□□□□ -0.3
NEK3-203ENST00000551355 NEXNQ0ZGT2 675 aa13.15□□□□□ -0.3
NEK3-203ENST00000551355 ITPK1Q13572 414 aa13.15□□□□□ -0.3
NEK3-203ENST00000551355 KIF6Q6ZMV9 814 aa13.15□□□□□ -0.3
NEK3-203ENST00000551355 RIC3Q7Z5B4 369 aa13.15□□□□□ -0.3
NEK3-203ENST00000551355 TMEM57Q8N5G2 664 aa13.15□□□□□ -0.3
NEK3-203ENST00000551355 PI4KAP1Q8N8J0 262 aa13.15□□□□□ -0.3
NEK3-203ENST00000551355 PLBD2Q8NHP8 589 aa13.15□□□□□ -0.3
NEK3-203ENST00000551355 PPP4R2Q9NY27 417 aa13.15□□□□□ -0.3
NEK3-203ENST00000551355 IBTKQ9P2D0 1353 aaPredicted RBP13.15□□□□□ -0.3
NEK3-203ENST00000551355 BRWD3Q6RI45 1802 aa13.15□□□□□ -0.3
NEK3-203ENST00000551355 C5P01031 1676 aa13.15□□□□□ -0.31
NEK3-203ENST00000551355 CACNA1FO60840 1977 aa13.14□□□□□ -0.31
NEK3-203ENST00000551355 RGL2O15211 777 aa13.14□□□□□ -0.31
NEK3-203ENST00000551355 APBA3O96018 575 aa13.14□□□□□ -0.31
NEK3-203ENST00000551355 AIMP1Q12904 312 aaKnown RBP13.14□□□□□ -0.31
NEK3-203ENST00000551355 INTS5Q6P9B9 1019 aaKnown RBP13.14□□□□□ -0.31
NEK3-203ENST00000551355 SLC4A10Q6U841 1118 aa13.14□□□□□ -0.31
NEK3-203ENST00000551355 CCDC125Q86Z20 511 aa13.14□□□□□ -0.31
NEK3-203ENST00000551355 EXOC6Q8TAG9 804 aa13.14□□□□□ -0.31
NEK3-203ENST00000551355 HDAC5Q9UQL6 1122 aa13.14□□□□□ -0.31
NEK3-203ENST00000551355 ATP10DQ9P241 1426 aa13.13□□□□□ -0.31
NEK3-203ENST00000551355 BTAF1O14981 1849 aa13.13□□□□□ -0.31
NEK3-203ENST00000551355 ERVV-1B6SEH8 477 aa13.13□□□□□ -0.31
NEK3-203ENST00000551355 ALDH1L1O75891 902 aa13.13□□□□□ -0.31
NEK3-203ENST00000551355 EIF5P55010 431 aaKnown RBP13.13□□□□□ -0.31
NEK3-203ENST00000551355 SF3B2Q13435 895 aaKnown RBP13.13□□□□□ -0.31
NEK3-203ENST00000551355 SRCIN1Q9C0H9 1055 aa13.13□□□□□ -0.31
NEK3-203ENST00000551355 ZBTB1Q9Y2K1 713 aa13.13□□□□□ -0.31
NEK3-203ENST00000551355 MAP3K2Q9Y2U5 619 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms