RNA–Protein interactions for RNA: ENST00000550536.5

RAB3IP-212, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RAB3IP, Length 9,646 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-212ENST00000550536 XPCQ01831 940 aaPredicted RBP14.53□□□□□ -0.08
RAB3IP-212ENST00000550536 MAP3K12Q12852 859 aa14.53□□□□□ -0.08
RAB3IP-212ENST00000550536 CUL5Q93034 780 aa14.53□□□□□ -0.08
RAB3IP-212ENST00000550536 SLC5A1P13866 664 aa14.53□□□□□ -0.08
RAB3IP-212ENST00000550536 CRACR2AQ9BSW2 395 aa14.53□□□□□ -0.08
RAB3IP-212ENST00000550536 SLC12A7Q9Y666 1083 aa14.53□□□□□ -0.08
RAB3IP-212ENST00000550536 IFIT1P09914 478 aaKnown RBP14.53□□□□□ -0.08
RAB3IP-212ENST00000550536 PRXQ9BXM0 1461 aa14.53□□□□□ -0.08
RAB3IP-212ENST00000550536 A0A087WZG4 1122 aa14.53□□□□□ -0.08
RAB3IP-212ENST00000550536 FILIP1Q7Z7B0 1213 aa14.53□□□□□ -0.08
RAB3IP-212ENST00000550536 C8orf76Q96K31 380 aa14.53□□□□□ -0.08
RAB3IP-212ENST00000550536 EHMT1Q9H9B1 1298 aa14.53□□□□□ -0.08
RAB3IP-212ENST00000550536 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.53□□□□□ -0.08
RAB3IP-212ENST00000550536 IQCA1Q86XH1 822 aa14.53□□□□□ -0.08
RAB3IP-212ENST00000550536 MIS18AQ9NYP9 233 aa14.53□□□□□ -0.08
RAB3IP-212ENST00000550536 CTCFLQ8NI51 663 aaPredicted RBP14.52□□□□□ -0.08
RAB3IP-212ENST00000550536 MCM10Q7L590 875 aa14.52□□□□□ -0.08
RAB3IP-212ENST00000550536 PBRM1Q86U86 1689 aa14.52□□□□□ -0.08
RAB3IP-212ENST00000550536 TAF7Q15545 349 aaPredicted RBP14.52□□□□□ -0.09
RAB3IP-212ENST00000550536 RPGRQ92834 1020 aaKnown RBP14.52□□□□□ -0.09
RAB3IP-212ENST00000550536 GBP3Q9H0R5 595 aa14.52□□□□□ -0.09
RAB3IP-212ENST00000550536 ANO10Q9NW15 660 aa14.52□□□□□ -0.09
RAB3IP-212ENST00000550536 CACNA2D4Q7Z3S7 1137 aa14.52□□□□□ -0.09
RAB3IP-212ENST00000550536 DYDC1Q8WWB3 177 aa14.52□□□□□ -0.09
RAB3IP-212ENST00000550536 MCM4P33991 863 aa14.52□□□□□ -0.09
RAB3IP-212ENST00000550536 MPNDQ8N594 471 aa14.51□□□□□ -0.09
RAB3IP-212ENST00000550536 SLFN5Q08AF3 891 aa14.51□□□□□ -0.09
RAB3IP-212ENST00000550536 PTPRCP08575 1304 aa14.51□□□□□ -0.09
RAB3IP-212ENST00000550536 UBXN4Q92575 508 aa14.51□□□□□ -0.09
RAB3IP-212ENST00000550536 CTAGE5O15320 804 aa14.51□□□□□ -0.09
RAB3IP-212ENST00000550536 SCLT1Q96NL6 688 aa14.51□□□□□ -0.09
RAB3IP-212ENST00000550536 RNF41Q9H4P4 317 aaPredicted RBP14.51□□□□□ -0.09
RAB3IP-212ENST00000550536 CATIPQ7Z7H3 387 aa14.51□□□□□ -0.09
RAB3IP-212ENST00000550536 RAPGEF3O95398 923 aa14.51□□□□□ -0.09
RAB3IP-212ENST00000550536 TAF3Q5VWG9 929 aa14.51□□□□□ -0.09
RAB3IP-212ENST00000550536 KLHL10Q6JEL2 608 aa14.51□□□□□ -0.09
RAB3IP-212ENST00000550536 CCDC97Q96F63 343 aaPredicted RBP14.51□□□□□ -0.09
RAB3IP-212ENST00000550536 SSRP1Q08945 709 aaKnown RBP14.51□□□□□ -0.09
RAB3IP-212ENST00000550536 KIAA0586Q9BVV6 1533 aa14.5□□□□□ -0.09
RAB3IP-212ENST00000550536 PRPF40BQ6NWY9 871 aaKnown RBP14.5□□□□□ -0.09
RAB3IP-212ENST00000550536 NUP88Q99567 741 aaPredicted RBP14.5□□□□□ -0.09
RAB3IP-212ENST00000550536 KIF18AQ8NI77 898 aa14.5□□□□□ -0.09
RAB3IP-212ENST00000550536 WDHD1O75717 1129 aaPredicted RBP14.5□□□□□ -0.09
RAB3IP-212ENST00000550536 CCDC83Q8IWF9 413 aa14.5□□□□□ -0.09
RAB3IP-212ENST00000550536 PTPN14Q15678 1187 aa14.5□□□□□ -0.09
RAB3IP-212ENST00000550536 NBPF8Q3BBV2 869 aa14.49□□□□□ -0.09
RAB3IP-212ENST00000550536 LRPPRCP42704 1394 aaKnown RBP14.49□□□□□ -0.09
RAB3IP-212ENST00000550536 CCDC96Q2M329 555 aa14.49□□□□□ -0.09
RAB3IP-212ENST00000550536 GOLGA8BA8MQT2 603 aa14.49□□□□□ -0.09
RAB3IP-212ENST00000550536 THOC2Q8NI27 1593 aaKnown RBP14.49□□□□□ -0.09
RAB3IP-212ENST00000550536 NAIPQ13075 1403 aa14.49□□□□□ -0.09
RAB3IP-212ENST00000550536 TMCO3Q6UWJ1 677 aa14.49□□□□□ -0.09
RAB3IP-212ENST00000550536 LUZP1Q86V48 1076 aa14.49□□□□□ -0.09
RAB3IP-212ENST00000550536 BOLA2Q9H3K6 86 aa14.49□□□□□ -0.09
RAB3IP-212ENST00000550536 KDM5AP29375 1690 aaKnown RBP14.49□□□□□ -0.09
RAB3IP-212ENST00000550536 PTCD1O75127 700 aaKnown RBP14.49□□□□□ -0.09
RAB3IP-212ENST00000550536 UBA5Q9GZZ9 404 aa14.49□□□□□ -0.09
RAB3IP-212ENST00000550536 TOP1P11387 765 aaKnown RBP14.49□□□□□ -0.09
RAB3IP-212ENST00000550536 NSD2O96028 1365 aa14.48□□□□□ -0.09
RAB3IP-212ENST00000550536 ZC3H6P61129 1189 aaKnown RBP14.48□□□□□ -0.09
RAB3IP-212ENST00000550536 MAP2K1Q02750 393 aaPredicted RBP14.48□□□□□ -0.09
RAB3IP-212ENST00000550536 TTF1Q15361 905 aaPredicted RBP14.48□□□□□ -0.09
RAB3IP-212ENST00000550536 RANBP6O60518 1105 aaKnown RBP14.48□□□□□ -0.09
RAB3IP-212ENST00000550536 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.48□□□□□ -0.09
RAB3IP-212ENST00000550536 MYD88Q99836 296 aa14.48□□□□□ -0.09
RAB3IP-212ENST00000550536 ABCA10Q8WWZ4 1543 aa14.48□□□□□ -0.09
RAB3IP-212ENST00000550536 ZNF213O14771 459 aa14.48□□□□□ -0.09
RAB3IP-212ENST00000550536 CCDC178Q5BJE1 867 aa14.48□□□□□ -0.09
RAB3IP-212ENST00000550536 CCDC12Q8WUD4 166 aaPredicted RBP14.48□□□□□ -0.09
RAB3IP-212ENST00000550536 ZNF444Q8N0Y2 327 aaPredicted RBP14.48□□□□□ -0.09
RAB3IP-212ENST00000550536 TTC21BQ7Z4L5 1316 aa14.48□□□□□ -0.09
RAB3IP-212ENST00000550536 MAP3K1Q13233 1512 aa14.48□□□□□ -0.09
RAB3IP-212ENST00000550536 GOPCQ9HD26 462 aa14.48□□□□□ -0.09
RAB3IP-212ENST00000550536 ESPNB1AK53 854 aa14.47□□□□□ -0.09
RAB3IP-212ENST00000550536 KIF5BP33176 963 aa14.47□□□□□ -0.09
RAB3IP-212ENST00000550536 PDCL2Q8N4E4 241 aa14.47□□□□□ -0.09
RAB3IP-212ENST00000550536 CETN1Q12798 172 aa14.47□□□□□ -0.09
RAB3IP-212ENST00000550536 SHTN1A0MZ66 631 aa14.47□□□□□ -0.09
RAB3IP-212ENST00000550536 KIF20AO95235 890 aa14.47□□□□□ -0.09
RAB3IP-212ENST00000550536 RALGAPBQ86X10 1494 aa14.47□□□□□ -0.09
RAB3IP-212ENST00000550536 GCOM1H8Y6P7 765 aaPredicted RBP14.47□□□□□ -0.09
RAB3IP-212ENST00000550536 MYZAPP0CAP1 466 aa14.47□□□□□ -0.09
RAB3IP-212ENST00000550536 CLIP2Q9UDT6 1046 aa14.47□□□□□ -0.09
RAB3IP-212ENST00000550536 CD109Q6YHK3 1445 aa14.47□□□□□ -0.09
RAB3IP-212ENST00000550536 ASXL1Q8IXJ9 1541 aa14.47□□□□□ -0.09
RAB3IP-212ENST00000550536 TAOK3Q9H2K8 898 aa14.46□□□□□ -0.09
RAB3IP-212ENST00000550536 IFFO1Q0D2I5 559 aa14.46□□□□□ -0.09
RAB3IP-212ENST00000550536 ALS2CR12Q96Q35 445 aa14.46□□□□□ -0.09
RAB3IP-212ENST00000550536 CCDC194A0A1B0GVG4 234 aa14.46□□□□□ -0.09
RAB3IP-212ENST00000550536 GSTTP1A0A1W2PQM5 241 aa14.46□□□□□ -0.09
RAB3IP-212ENST00000550536 ANKRD18BA2A2Z9 1011 aa14.46□□□□□ -0.09
RAB3IP-212ENST00000550536 CCDC113Q9H0I3 377 aa14.46□□□□□ -0.09
RAB3IP-212ENST00000550536 SCAF11Q99590 1463 aaKnown RBP14.46□□□□□ -0.09
RAB3IP-212ENST00000550536 STAMBPO95630 424 aa14.46□□□□□ -0.09
RAB3IP-212ENST00000550536 SMARCA5O60264 1052 aaPredicted RBP14.46□□□□□ -0.1
RAB3IP-212ENST00000550536 TSPOAP1O95153 1857 aa14.46□□□□□ -0.1
RAB3IP-212ENST00000550536 HOOK3Q86VS8 718 aa14.46□□□□□ -0.1
RAB3IP-212ENST00000550536 USO1O60763 962 aaKnown RBP14.46□□□□□ -0.1
RAB3IP-212ENST00000550536 STX1AQ16623 288 aa14.45□□□□□ -0.1
RAB3IP-212ENST00000550536 MPRIPQ6WCQ1 1025 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms