RNA–Protein interactions for RNA: ENST00000550513.1

PFDN5-210, Transcript of prefoldin subunit 5, humanhuman

TSL 3

Gene PFDN5, Length 939 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-210ENST00000550513 PER1O15534 1290 aaPredicted RBP14.68□□□□□ -0.06
PFDN5-210ENST00000550513 DDR1Q08345 913 aa14.68□□□□□ -0.06
PFDN5-210ENST00000550513 SLC39A6Q13433 755 aa14.68□□□□□ -0.06
PFDN5-210ENST00000550513 INTS5Q6P9B9 1019 aaKnown RBP14.68□□□□□ -0.06
PFDN5-210ENST00000550513 NPC1L1Q9UHC9 1359 aa14.68□□□□□ -0.06
PFDN5-210ENST00000550513 DICER1Q9UPY3 1922 aaKnown RBP14.68□□□□□ -0.06
PFDN5-210ENST00000550513 LAMB4A4D0S4 1761 aa14.68□□□□□ -0.06
PFDN5-210ENST00000550513 ZPR1O75312 459 aa14.67□□□□□ -0.06
PFDN5-210ENST00000550513 MTHFSDQ2M296 383 aaKnown RBP14.67□□□□□ -0.06
PFDN5-210ENST00000550513 ARHGAP27Q6ZUM4 889 aa14.67□□□□□ -0.06
PFDN5-210ENST00000550513 POLRMTO00411 1230 aaKnown RBP14.66□□□□□ -0.06
PFDN5-210ENST00000550513 KIF3CO14782 793 aa14.66□□□□□ -0.06
PFDN5-210ENST00000550513 HSPA6P17066 643 aa14.66□□□□□ -0.06
PFDN5-210ENST00000550513 USPL1Q5W0Q7 1092 aa14.66□□□□□ -0.06
PFDN5-210ENST00000550513 PIM2Q9P1W9 311 aa14.66□□□□□ -0.06
PFDN5-210ENST00000550513 ZBTB1Q9Y2K1 713 aa14.66□□□□□ -0.06
PFDN5-210ENST00000550513 CYP19A1P11511 503 aaPredicted RBP14.65□□□□□ -0.06
PFDN5-210ENST00000550513 KCNA3P22001 575 aa14.65□□□□□ -0.06
PFDN5-210ENST00000550513 FER1L6Q2WGJ9 1857 aa14.65□□□□□ -0.06
PFDN5-210ENST00000550513 CNGB1Q14028 1251 aaPredicted RBP14.64□□□□□ -0.07
PFDN5-210ENST00000550513 DALRD3Q5D0E6 543 aaKnown RBP14.64□□□□□ -0.07
PFDN5-210ENST00000550513 TTC5Q8N0Z6 440 aa14.64□□□□□ -0.07
PFDN5-210ENST00000550513 VSIG10Q8N0Z9 540 aa14.64□□□□□ -0.07
PFDN5-210ENST00000550513 U2SURPO15042 1029 aaKnown RBP14.63□□□□□ -0.07
PFDN5-210ENST00000550513 CHRNA5P30532 468 aa14.63□□□□□ -0.07
PFDN5-210ENST00000550513 NARFQ9UHQ1 456 aa14.63□□□□□ -0.07
PFDN5-210ENST00000550513 TM4SF1P30408 202 aa14.62□□□□□ -0.07
PFDN5-210ENST00000550513 GAS2L2Q8NHY3 880 aa14.62□□□□□ -0.07
PFDN5-210ENST00000550513 TEFQ10587 303 aa14.61□□□□□ -0.07
PFDN5-210ENST00000550513 NFIXQ14938 502 aa14.61□□□□□ -0.07
PFDN5-210ENST00000550513 C9orf131Q5VYM1 1079 aa14.61□□□□□ -0.07
PFDN5-210ENST00000550513 CARMIL3Q8ND23 1372 aa14.6□□□□□ -0.07
PFDN5-210ENST00000550513 HEG1Q9ULI3 1381 aa14.6□□□□□ -0.07
PFDN5-210ENST00000550513 KDM3BQ7LBC6 1761 aa14.6□□□□□ -0.07
PFDN5-210ENST00000550513 GNAT3A8MTJ3 354 aa14.6□□□□□ -0.07
PFDN5-210ENST00000550513 TOMM70O94826 608 aa14.6□□□□□ -0.07
PFDN5-210ENST00000550513 CANXP27824 592 aaKnown RBP14.6□□□□□ -0.07
PFDN5-210ENST00000550513 NMRK2Q9NPI5 230 aa14.6□□□□□ -0.07
PFDN5-210ENST00000550513 STARD3NLO95772 234 aa14.59□□□□□ -0.07
PFDN5-210ENST00000550513 BCL2L12Q9HB09 334 aa14.59□□□□□ -0.07
PFDN5-210ENST00000550513 RNF181Q9P0P0 153 aa14.59□□□□□ -0.07
PFDN5-210ENST00000550513 CEMIPQ8WUJ3 1361 aa14.59□□□□□ -0.07
PFDN5-210ENST00000550513 ZNF790Q6PG37 636 aa14.58□□□□□ -0.08
PFDN5-210ENST00000550513 ZNF496Q96IT1 587 aaPredicted RBP14.58□□□□□ -0.08
PFDN5-210ENST00000550513 CFAP53Q96M91 514 aa14.58□□□□□ -0.08
PFDN5-210ENST00000550513 KDM2BQ8NHM5 1336 aa14.58□□□□□ -0.08
PFDN5-210ENST00000550513 SLX4Q8IY92 1834 aa14.57□□□□□ -0.08
PFDN5-210ENST00000550513 A0A087WZG4 1122 aa14.57□□□□□ -0.08
PFDN5-210ENST00000550513 SERPINB2P05120 415 aa14.57□□□□□ -0.08
PFDN5-210ENST00000550513 IL17REQ8NFR9 667 aa14.57□□□□□ -0.08
PFDN5-210ENST00000550513 ZNF330Q9Y3S2 320 aaPredicted RBP14.57□□□□□ -0.08
PFDN5-210ENST00000550513 PRKAR2BP31323 418 aa14.56□□□□□ -0.08
PFDN5-210ENST00000550513 APLP1P51693 650 aa14.56□□□□□ -0.08
PFDN5-210ENST00000550513 EIF5P55010 431 aaKnown RBP14.56□□□□□ -0.08
PFDN5-210ENST00000550513 RASSF7Q02833 373 aa14.56□□□□□ -0.08
PFDN5-210ENST00000550513 BICDL1Q6ZP65 573 aa14.56□□□□□ -0.08
PFDN5-210ENST00000550513 C16orf71Q8IYS4 520 aaPredicted RBP14.56□□□□□ -0.08
PFDN5-210ENST00000550513 NUP98P52948 1817 aa14.56□□□□□ -0.08
PFDN5-210ENST00000550513 FMNL2Q96PY5 1086 aa14.55□□□□□ -0.08
PFDN5-210ENST00000550513 TEX13AQ9BXU3 409 aaPredicted RBP14.55□□□□□ -0.08
PFDN5-210ENST00000550513 RSPH6AQ9H0K4 717 aa14.55□□□□□ -0.08
PFDN5-210ENST00000550513 ZC3H4Q9UPT8 1303 aaKnown RBP14.55□□□□□ -0.08
PFDN5-210ENST00000550513 C2CD5Q86YS7 1000 aa14.54□□□□□ -0.08
PFDN5-210ENST00000550513 RBM46Q8TBY0 533 aaKnown RBP14.54□□□□□ -0.08
PFDN5-210ENST00000550513 BTBD11A6QL63 1104 aa14.53□□□□□ -0.08
PFDN5-210ENST00000550513 H0YIN7 160 aa14.53□□□□□ -0.08
PFDN5-210ENST00000550513 IL6STP40189 918 aaPredicted RBP14.53□□□□□ -0.08
PFDN5-210ENST00000550513 TBC1D9BQ66K14 1250 aa14.53□□□□□ -0.08
PFDN5-210ENST00000550513 NPM2Q86SE8 214 aaKnown RBP14.53□□□□□ -0.08
PFDN5-210ENST00000550513 TTLL6Q8N841 843 aa14.53□□□□□ -0.08
PFDN5-210ENST00000550513 PHACTR3Q96KR7 559 aa14.53□□□□□ -0.08
PFDN5-210ENST00000550513 TBC1D2BQ9UPU7 963 aa14.52□□□□□ -0.09
PFDN5-210ENST00000550513 NUDCQ9Y266 331 aa14.52□□□□□ -0.09
PFDN5-210ENST00000550513 LMNB1P20700 586 aa14.51□□□□□ -0.09
PFDN5-210ENST00000550513 A1BGP04217 495 aa14.5□□□□□ -0.09
PFDN5-210ENST00000550513 U2AF1L5P0DN76 240 aaPredicted RBP14.5□□□□□ -0.09
PFDN5-210ENST00000550513 PPP2R1AP30153 589 aa14.5□□□□□ -0.09
PFDN5-210ENST00000550513 PDE6BP35913 854 aa14.5□□□□□ -0.09
PFDN5-210ENST00000550513 U2AF1Q01081 240 aaKnown RBP eCLIP14.5□□□□□ -0.09
PFDN5-210ENST00000550513 FSTL1Q12841 308 aa14.5□□□□□ -0.09
PFDN5-210ENST00000550513 IFFO2Q5TF58 517 aa14.5□□□□□ -0.09
PFDN5-210ENST00000550513 PRR5LQ6MZQ0 368 aa14.5□□□□□ -0.09
PFDN5-210ENST00000550513 RTF1Q92541 710 aaKnown RBP14.5□□□□□ -0.09
PFDN5-210ENST00000550513 RRAGCQ9HB90 399 aa14.5□□□□□ -0.09
PFDN5-210ENST00000550513 PDZRN3Q9UPQ7 1066 aa14.5□□□□□ -0.09
PFDN5-210ENST00000550513 SCN4AP35499 1836 aa14.5□□□□□ -0.09
PFDN5-210ENST00000550513 ANKRD36CQ5JPF3 1778 aa14.5□□□□□ -0.09
PFDN5-210ENST00000550513 NPHP1O15259 732 aa14.49□□□□□ -0.09
PFDN5-210ENST00000550513 KCNQ3O43525 872 aa14.49□□□□□ -0.09
PFDN5-210ENST00000550513 PRELPP51888 382 aa14.49□□□□□ -0.09
PFDN5-210ENST00000550513 CNBD1Q8NA66 436 aa14.49□□□□□ -0.09
PFDN5-210ENST00000550513 ZNF622Q969S3 477 aaKnown RBP eCLIP14.49□□□□□ -0.09
PFDN5-210ENST00000550513 BRIP1Q9BX63 1249 aa14.49□□□□□ -0.09
PFDN5-210ENST00000550513 NFKBIEO00221 500 aa14.48□□□□□ -0.09
PFDN5-210ENST00000550513 CAMTA2O94983 1202 aa14.48□□□□□ -0.09
PFDN5-210ENST00000550513 ST5P78524 1137 aa14.48□□□□□ -0.09
PFDN5-210ENST00000550513 MCM10Q7L590 875 aa14.48□□□□□ -0.09
PFDN5-210ENST00000550513 DZIP3Q86Y13 1208 aaKnown RBP14.48□□□□□ -0.09
PFDN5-210ENST00000550513 CCDC24Q8N4L8 307 aa14.48□□□□□ -0.09
PFDN5-210ENST00000550513 SETDB2Q96T68 719 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms