RNA–Protein interactions for RNA: ENST00000550504.5

RAB5C-207, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-207ENST00000550504 PIP4K2AP48426 406 aaPredicted RBP13.19□□□□□ -0.3
RAB5C-207ENST00000550504 MRPL50Q8N5N7 158 aaKnown RBP13.19□□□□□ -0.3
RAB5C-207ENST00000550504 FRAT1Q92837 279 aaPredicted RBP13.19□□□□□ -0.3
RAB5C-207ENST00000550504 TEX13AQ9BXU3 409 aaPredicted RBP13.19□□□□□ -0.3
RAB5C-207ENST00000550504 CCNL1Q9UK58 526 aaPredicted RBP13.19□□□□□ -0.3
RAB5C-207ENST00000550504 PLIN1O60240 522 aa13.18□□□□□ -0.3
RAB5C-207ENST00000550504 SLC4A2P04920 1241 aa13.18□□□□□ -0.3
RAB5C-207ENST00000550504 MYL6BP14649 208 aa13.18□□□□□ -0.3
RAB5C-207ENST00000550504 CHMP4AQ9BY43 222 aa13.18□□□□□ -0.3
RAB5C-207ENST00000550504 LY75O60449 1722 aa13.18□□□□□ -0.3
RAB5C-207ENST00000550504 STARD3NLO95772 234 aa13.17□□□□□ -0.3
RAB5C-207ENST00000550504 A1BGP04217 495 aa13.17□□□□□ -0.3
RAB5C-207ENST00000550504 CYP19A1P11511 503 aaPredicted RBP13.17□□□□□ -0.3
RAB5C-207ENST00000550504 CANXP27824 592 aaKnown RBP13.17□□□□□ -0.3
RAB5C-207ENST00000550504 PROSER3Q2NL68 480 aa13.17□□□□□ -0.3
RAB5C-207ENST00000550504 DBF4Q9UBU7 674 aaPredicted RBP13.17□□□□□ -0.3
RAB5C-207ENST00000550504 RRP1P56182 461 aaKnown RBP13.16□□□□□ -0.3
RAB5C-207ENST00000550504 SF3B2Q13435 895 aaKnown RBP13.16□□□□□ -0.3
RAB5C-207ENST00000550504 PDIA6Q15084 440 aa13.16□□□□□ -0.3
RAB5C-207ENST00000550504 G2E3Q7L622 706 aa13.16□□□□□ -0.3
RAB5C-207ENST00000550504 LINC00116Q8NCU8 138 aa13.16□□□□□ -0.3
RAB5C-207ENST00000550504 NOB1Q9ULX3 412 aaKnown RBP13.16□□□□□ -0.3
RAB5C-207ENST00000550504 KIF16BQ96L93 1317 aa13.15□□□□□ -0.3
RAB5C-207ENST00000550504 CICQ96RK0 1608 aaPredicted RBP13.15□□□□□ -0.3
RAB5C-207ENST00000550504 NBPF26B4DH59 902 aa13.15□□□□□ -0.3
RAB5C-207ENST00000550504 PLSCR1O15162 318 aa13.15□□□□□ -0.3
RAB5C-207ENST00000550504 CRKLP46109 303 aaKnown RBP13.15□□□□□ -0.3
RAB5C-207ENST00000550504 TXNRD1Q16881 649 aa13.15□□□□□ -0.3
RAB5C-207ENST00000550504 NBPF14Q5TI25 921 aa13.15□□□□□ -0.3
RAB5C-207ENST00000550504 NBPF10Q6P3W6 841 aaKnown RBP13.15□□□□□ -0.3
RAB5C-207ENST00000550504 NBPF15Q8N660 670 aa13.15□□□□□ -0.3
RAB5C-207ENST00000550504 PHAXQ9H814 394 aaKnown RBP13.15□□□□□ -0.3
RAB5C-207ENST00000550504 DDX21Q9NR30 783 aaKnown RBP eCLIP13.15□□□□□ -0.3
RAB5C-207ENST00000550504 LRRC4BQ9NT99 713 aa13.15□□□□□ -0.3
RAB5C-207ENST00000550504 ZNF330Q9Y3S2 320 aaPredicted RBP13.15□□□□□ -0.3
RAB5C-207ENST00000550504 ZNF831Q5JPB2 1677 aa13.15□□□□□ -0.31
RAB5C-207ENST00000550504 COL5A3P25940 1745 aaPredicted RBP13.14□□□□□ -0.31
RAB5C-207ENST00000550504 AIMP1Q12904 312 aaKnown RBP13.14□□□□□ -0.31
RAB5C-207ENST00000550504 SLC27A3Q5K4L6 730 aa13.14□□□□□ -0.31
RAB5C-207ENST00000550504 PROM2Q8N271 834 aa13.14□□□□□ -0.31
RAB5C-207ENST00000550504 CCDC87Q9NVE4 849 aa13.14□□□□□ -0.31
RAB5C-207ENST00000550504 HYPKQ9NX55 129 aa13.14□□□□□ -0.31
RAB5C-207ENST00000550504 ZBTB1Q9Y2K1 713 aa13.14□□□□□ -0.31
RAB5C-207ENST00000550504 ERBB4Q15303 1308 aa13.13□□□□□ -0.31
RAB5C-207ENST00000550504 BRPF1P55201 1214 aaPredicted RBP13.13□□□□□ -0.31
RAB5C-207ENST00000550504 EN1Q05925 392 aaPredicted RBP13.13□□□□□ -0.31
RAB5C-207ENST00000550504 FLIIQ13045 1269 aa13.13□□□□□ -0.31
RAB5C-207ENST00000550504 EZH2Q15910 746 aaKnown RBP13.13□□□□□ -0.31
RAB5C-207ENST00000550504 ZKSCAN2Q63HK3 967 aa13.13□□□□□ -0.31
RAB5C-207ENST00000550504 INTS5Q6P9B9 1019 aaKnown RBP13.13□□□□□ -0.31
RAB5C-207ENST00000550504 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.13□□□□□ -0.31
RAB5C-207ENST00000550504 XAGE3Q8WTP9 111 aa13.13□□□□□ -0.31
RAB5C-207ENST00000550504 TNNQ9UQP3 1299 aa13.13□□□□□ -0.31
RAB5C-207ENST00000550504 TAF1LQ8IZX4 1826 aa13.13□□□□□ -0.31
RAB5C-207ENST00000550504 RNF123Q5XPI4 1314 aa13.13□□□□□ -0.31
RAB5C-207ENST00000550504 IPO8O15397 1037 aaKnown RBP13.12□□□□□ -0.31
RAB5C-207ENST00000550504 BAG6P46379 1132 aa13.12□□□□□ -0.31
RAB5C-207ENST00000550504 IRX6P78412 446 aaPredicted RBP13.12□□□□□ -0.31
RAB5C-207ENST00000550504 FKBP5Q13451 457 aaPredicted RBP13.12□□□□□ -0.31
RAB5C-207ENST00000550504 DEFB132Q7Z7B7 95 aa13.12□□□□□ -0.31
RAB5C-207ENST00000550504 CLUAP1Q96AJ1 413 aa13.12□□□□□ -0.31
RAB5C-207ENST00000550504 CNTNAP4Q9C0A0 1308 aa13.12□□□□□ -0.31
RAB5C-207ENST00000550504 CACNA1FO60840 1977 aa13.11□□□□□ -0.31
RAB5C-207ENST00000550504 TRIM27P14373 513 aa13.11□□□□□ -0.31
RAB5C-207ENST00000550504 C20orf194Q5TEA3 1177 aa13.11□□□□□ -0.31
RAB5C-207ENST00000550504 COPS6Q7L5N1 327 aa13.11□□□□□ -0.31
RAB5C-207ENST00000550504 LRP10Q7Z4F1 713 aa13.11□□□□□ -0.31
RAB5C-207ENST00000550504 ARXQ96QS3 562 aa13.11□□□□□ -0.31
RAB5C-207ENST00000550504 CAMKK2Q96RR4 588 aa13.11□□□□□ -0.31
RAB5C-207ENST00000550504 MYH14Q7Z406 1995 aaKnown RBP13.11□□□□□ -0.31
RAB5C-207ENST00000550504 C4BP0C0L5 1744 aa13.1□□□□□ -0.31
RAB5C-207ENST00000550504 RGPD3A6NKT7 1758 aaPredicted RBP13.1□□□□□ -0.31
RAB5C-207ENST00000550504 RGPD4Q7Z3J3 1758 aa13.1□□□□□ -0.31
RAB5C-207ENST00000550504 RREB1Q92766 1687 aa13.1□□□□□ -0.31
RAB5C-207ENST00000550504 GNPATO15228 680 aa13.1□□□□□ -0.31
RAB5C-207ENST00000550504 ATF7IPQ6VMQ6 1270 aa13.1□□□□□ -0.31
RAB5C-207ENST00000550504 SMIM5Q71RC9 77 aa13.1□□□□□ -0.31
RAB5C-207ENST00000550504 NPM2Q86SE8 214 aaKnown RBP13.1□□□□□ -0.31
RAB5C-207ENST00000550504 AK7Q96M32 723 aa13.1□□□□□ -0.31
RAB5C-207ENST00000550504 API5Q9BZZ5 524 aaKnown RBP13.1□□□□□ -0.31
RAB5C-207ENST00000550504 PTPRCP08575 1304 aa13.1□□□□□ -0.31
RAB5C-207ENST00000550504 F6X3S4 739 aa13.09□□□□□ -0.31
RAB5C-207ENST00000550504 IL6STP40189 918 aaPredicted RBP13.09□□□□□ -0.31
RAB5C-207ENST00000550504 RC3H1Q5TC82 1133 aaKnown RBP13.09□□□□□ -0.31
RAB5C-207ENST00000550504 TTLL7Q6ZT98 887 aa13.09□□□□□ -0.31
RAB5C-207ENST00000550504 FTSJ3Q8IY81 847 aaKnown RBP13.09□□□□□ -0.31
RAB5C-207ENST00000550504 PANK1Q8TE04 598 aa13.09□□□□□ -0.31
RAB5C-207ENST00000550504 ARHGAP45Q92619 1136 aa13.09□□□□□ -0.31
RAB5C-207ENST00000550504 PI4KAP2A4QPH2 592 aa13.08□□□□□ -0.32
RAB5C-207ENST00000550504 RPS6KA4O75676 772 aa13.08□□□□□ -0.32
RAB5C-207ENST00000550504 DDX58O95786 925 aaKnown RBP13.08□□□□□ -0.32
RAB5C-207ENST00000550504 RLBP1P12271 317 aa13.08□□□□□ -0.32
RAB5C-207ENST00000550504 EIF5P55010 431 aaKnown RBP13.08□□□□□ -0.32
RAB5C-207ENST00000550504 SLC4A10Q6U841 1118 aa13.08□□□□□ -0.32
RAB5C-207ENST00000550504 RIC3Q7Z5B4 369 aa13.08□□□□□ -0.32
RAB5C-207ENST00000550504 DZIP1LQ8IYY4 767 aaKnown RBP13.08□□□□□ -0.32
RAB5C-207ENST00000550504 PI4KAP1Q8N8J0 262 aa13.08□□□□□ -0.32
RAB5C-207ENST00000550504 ZBTB3Q9H5J0 574 aa13.08□□□□□ -0.32
RAB5C-207ENST00000550504 ADCY9O60503 1353 aa13.07□□□□□ -0.32
RAB5C-207ENST00000550504 PHF14O94880 888 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 953.4 ms