RNA–Protein interactions for RNA: ENST00000550325.5

VDR-208, Transcript of vitamin D receptor, humanhuman

TSL 1 (best) BASIC

Gene VDR, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-208ENST00000550325 ARID5BQ14865 1188 aa14.4□□□□□ -0.1
VDR-208ENST00000550325 TRIM34Q9BYJ4 488 aa14.4□□□□□ -0.1
VDR-208ENST00000550325 RPAP1Q9BWH6 1393 aaPredicted RBP14.4□□□□□ -0.11
VDR-208ENST00000550325 LARGE1O95461 756 aa14.39□□□□□ -0.11
VDR-208ENST00000550325 PAXBP1Q9Y5B6 917 aa14.39□□□□□ -0.11
VDR-208ENST00000550325 POLR3GO15318 223 aaPredicted RBP14.39□□□□□ -0.11
VDR-208ENST00000550325 LARP1BQ659C4 914 aaKnown RBP14.39□□□□□ -0.11
VDR-208ENST00000550325 ZBTB9Q96C00 473 aa14.39□□□□□ -0.11
VDR-208ENST00000550325 JAKMIP1Q96N16 626 aaKnown RBP14.39□□□□□ -0.11
VDR-208ENST00000550325 PLCH2O75038 1416 aa14.39□□□□□ -0.11
VDR-208ENST00000550325 FOSBP53539 338 aa14.39□□□□□ -0.11
VDR-208ENST00000550325 KMT5BQ4FZB7 885 aa14.39□□□□□ -0.11
VDR-208ENST00000550325 CACTINQ8WUQ7 758 aaKnown RBP14.39□□□□□ -0.11
VDR-208ENST00000550325 RGS12O14924 1447 aa14.39□□□□□ -0.11
VDR-208ENST00000550325 PNMA6EA0A0J9YXQ4 647 aa14.38□□□□□ -0.11
VDR-208ENST00000550325 ZNF165P49910 485 aa14.38□□□□□ -0.11
VDR-208ENST00000550325 KRT85P78386 507 aa14.38□□□□□ -0.11
VDR-208ENST00000550325 SULT6B1Q6IMI4 303 aa14.38□□□□□ -0.11
VDR-208ENST00000550325 RUFY3Q7L099 469 aa14.38□□□□□ -0.11
VDR-208ENST00000550325 NME9Q86XW9 330 aa14.38□□□□□ -0.11
VDR-208ENST00000550325 RASEFQ8IZ41 740 aa14.38□□□□□ -0.11
VDR-208ENST00000550325 ZNF397Q8NF99 534 aaPredicted RBP14.38□□□□□ -0.11
VDR-208ENST00000550325 MYOM2P54296 1465 aa14.38□□□□□ -0.11
VDR-208ENST00000550325 USP27XA6NNY8 438 aa14.38□□□□□ -0.11
VDR-208ENST00000550325 OS9Q13438 667 aaPredicted RBP14.38□□□□□ -0.11
VDR-208ENST00000550325 TCEANC2Q96MN5 208 aa14.38□□□□□ -0.11
VDR-208ENST00000550325 MRVI1Q9Y6F6 885 aa14.38□□□□□ -0.11
VDR-208ENST00000550325 ZNF853P0CG23 659 aa14.37□□□□□ -0.11
VDR-208ENST00000550325 STK3Q13188 491 aa14.37□□□□□ -0.11
VDR-208ENST00000550325 IPO4Q8TEX9 1081 aaKnown RBP14.37□□□□□ -0.11
VDR-208ENST00000550325 SNX14Q9Y5W7 946 aa14.37□□□□□ -0.11
VDR-208ENST00000550325 ATP10DQ9P241 1426 aa14.37□□□□□ -0.11
VDR-208ENST00000550325 NOL10Q9BSC4 688 aaKnown RBP14.37□□□□□ -0.11
VDR-208ENST00000550325 QRICH2Q9H0J4 1663 aa14.37□□□□□ -0.11
VDR-208ENST00000550325 BECN2A8MW95 431 aa14.37□□□□□ -0.11
VDR-208ENST00000550325 HAP1P54257 671 aaPredicted RBP14.37□□□□□ -0.11
VDR-208ENST00000550325 ZFP91Q96JP5 570 aaPredicted RBP14.37□□□□□ -0.11
VDR-208ENST00000550325 PDRG1Q9NUG6 133 aa14.37□□□□□ -0.11
VDR-208ENST00000550325 CALCOCO1Q9P1Z2 691 aa14.37□□□□□ -0.11
VDR-208ENST00000550325 SURF6O75683 361 aaKnown RBP14.36□□□□□ -0.11
VDR-208ENST00000550325 ZNF75DP51815 510 aa14.36□□□□□ -0.11
VDR-208ENST00000550325 FBXO38Q6PIJ6 1188 aa14.36□□□□□ -0.11
VDR-208ENST00000550325 FUCA2Q9BTY2 467 aa14.36□□□□□ -0.11
VDR-208ENST00000550325 LRRC7Q96NW7 1537 aa14.36□□□□□ -0.11
VDR-208ENST00000550325 PRPF40BQ6NWY9 871 aaKnown RBP14.36□□□□□ -0.11
VDR-208ENST00000550325 TMEM87AQ8NBN3 555 aa14.36□□□□□ -0.11
VDR-208ENST00000550325 STK31Q9BXU1 1019 aa14.36□□□□□ -0.11
VDR-208ENST00000550325 SKILP12757 684 aa14.36□□□□□ -0.11
VDR-208ENST00000550325 PDIA4P13667 645 aaKnown RBP14.36□□□□□ -0.11
VDR-208ENST00000550325 ERCC6L2Q5T890 1561 aa14.36□□□□□ -0.11
VDR-208ENST00000550325 TTC6Q86TZ1 520 aa14.36□□□□□ -0.11
VDR-208ENST00000550325 SPATA32Q96LK8 384 aa14.36□□□□□ -0.11
VDR-208ENST00000550325 LRRFIP2Q9Y608 721 aaKnown RBP14.36□□□□□ -0.11
VDR-208ENST00000550325 CCDC144BQ3MJ40 725 aa14.35□□□□□ -0.11
VDR-208ENST00000550325 CCDC144CPQ8IYA2 1237 aa14.35□□□□□ -0.11
VDR-208ENST00000550325 MORC2Q9Y6X9 1032 aaPredicted RBP14.35□□□□□ -0.11
VDR-208ENST00000550325 A0A087WWV3 80 aa14.35□□□□□ -0.11
VDR-208ENST00000550325 HSPA4P34932 840 aa14.35□□□□□ -0.11
VDR-208ENST00000550325 MTMR6Q9Y217 621 aa14.35□□□□□ -0.11
VDR-208ENST00000550325 TSPYL4Q9UJ04 414 aa14.35□□□□□ -0.11
VDR-208ENST00000550325 USP16Q9Y5T5 823 aa14.35□□□□□ -0.11
VDR-208ENST00000550325 RIMS2Q9UQ26 1411 aa14.34□□□□□ -0.11
VDR-208ENST00000550325 DNAJC2Q99543 621 aaKnown RBP14.34□□□□□ -0.11
VDR-208ENST00000550325 OSBPL3Q9H4L5 887 aa14.34□□□□□ -0.11
VDR-208ENST00000550325 FAM135BQ49AJ0 1406 aa14.34□□□□□ -0.11
VDR-208ENST00000550325 CDC37L1Q7L3B6 337 aa14.33□□□□□ -0.12
VDR-208ENST00000550325 TAOK2Q9UL54 1235 aa14.33□□□□□ -0.12
VDR-208ENST00000550325 RAD50Q92878 1312 aa14.33□□□□□ -0.12
VDR-208ENST00000550325 IL13P35225 146 aa14.33□□□□□ -0.12
VDR-208ENST00000550325 COL3A1P02461 1466 aaPredicted RBP14.33□□□□□ -0.12
VDR-208ENST00000550325 CCT4P50991 539 aaKnown RBP14.33□□□□□ -0.12
VDR-208ENST00000550325 ERCC6LQ2NKX8 1250 aa14.33□□□□□ -0.12
VDR-208ENST00000550325 ARHGEF40Q8TER5 1519 aa14.32□□□□□ -0.12
VDR-208ENST00000550325 WAPLQ7Z5K2 1190 aa14.32□□□□□ -0.12
VDR-208ENST00000550325 HOMER1Q86YM7 354 aa14.32□□□□□ -0.12
VDR-208ENST00000550325 CYP46A1Q9Y6A2 500 aa14.32□□□□□ -0.12
VDR-208ENST00000550325 HTATSF1O43719 755 aaKnown RBP14.32□□□□□ -0.12
VDR-208ENST00000550325 COG3Q96JB2 828 aa14.32□□□□□ -0.12
VDR-208ENST00000550325 TULP4Q9NRJ4 1543 aa14.32□□□□□ -0.12
VDR-208ENST00000550325 PTPRCP08575 1304 aa14.32□□□□□ -0.12
VDR-208ENST00000550325 ADCK5Q3MIX3 580 aa14.31□□□□□ -0.12
VDR-208ENST00000550325 NEK11Q8NG66 645 aa14.31□□□□□ -0.12
VDR-208ENST00000550325 KIAA1210Q9ULL0 1709 aa14.31□□□□□ -0.12
VDR-208ENST00000550325 CCDC69A6NI79 296 aa14.31□□□□□ -0.12
VDR-208ENST00000550325 TMX1Q9H3N1 280 aa14.31□□□□□ -0.12
VDR-208ENST00000550325 KIF1BO60333 1816 aa14.31□□□□□ -0.12
VDR-208ENST00000550325 SLU7O95391 586 aaKnown RBP14.31□□□□□ -0.12
VDR-208ENST00000550325 HNRNPH2P55795 449 aaKnown RBP14.31□□□□□ -0.12
VDR-208ENST00000550325 CNTROBQ8N137 903 aa14.31□□□□□ -0.12
VDR-208ENST00000550325 ERCC4Q92889 916 aaPredicted RBP14.31□□□□□ -0.12
VDR-208ENST00000550325 FMNL2Q96PY5 1086 aa14.31□□□□□ -0.12
VDR-208ENST00000550325 PPRC1Q5VV67 1664 aaKnown RBP14.3□□□□□ -0.12
VDR-208ENST00000550325 NUTM2FA1L443 756 aa14.3□□□□□ -0.12
VDR-208ENST00000550325 NR1I2O75469 434 aa14.3□□□□□ -0.12
VDR-208ENST00000550325 DDX11Q96FC9 970 aa14.3□□□□□ -0.12
VDR-208ENST00000550325 KNDC1Q76NI1 1749 aa14.3□□□□□ -0.12
VDR-208ENST00000550325 REREQ9P2R6 1566 aa14.3□□□□□ -0.12
VDR-208ENST00000550325 UBTFL1P0CB47 393 aaPredicted RBP14.3□□□□□ -0.12
VDR-208ENST00000550325 PPFIA3O75145 1194 aa14.3□□□□□ -0.12
VDR-208ENST00000550325 GNAI3P08754 354 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms