RNA–Protein interactions for RNA: ENST00000550205.1

PXN-216, Transcript of paxillin, humanhuman

TSL 4

Gene PXN, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXN-216ENST00000550205 UBR2Q8IWV8 1755 aa13.16□□□□□ -0.3
PXN-216ENST00000550205 COL15A1P39059 1388 aa13.16□□□□□ -0.3
PXN-216ENST00000550205 NRXN2Q9P2S2 1712 aa13.16□□□□□ -0.3
PXN-216ENST00000550205 VIRMAQ69YN4 1812 aaKnown RBP13.16□□□□□ -0.3
PXN-216ENST00000550205 CHRNA5P30532 468 aa13.14□□□□□ -0.31
PXN-216ENST00000550205 NFIXQ14938 502 aa13.14□□□□□ -0.31
PXN-216ENST00000550205 CC2D1BQ5T0F9 858 aaKnown RBP13.14□□□□□ -0.31
PXN-216ENST00000550205 IFFO2Q5TF58 517 aa13.14□□□□□ -0.31
PXN-216ENST00000550205 C9orf131Q5VYM1 1079 aa13.14□□□□□ -0.31
PXN-216ENST00000550205 ZBTB1Q9Y2K1 713 aa13.14□□□□□ -0.31
PXN-216ENST00000550205 APLP1P51693 650 aa13.13□□□□□ -0.31
PXN-216ENST00000550205 BCL2L12Q9HB09 334 aa13.13□□□□□ -0.31
PXN-216ENST00000550205 NMRK2Q9NPI5 230 aa13.13□□□□□ -0.31
PXN-216ENST00000550205 RBM46Q8TBY0 533 aaKnown RBP13.12□□□□□ -0.31
PXN-216ENST00000550205 AFDNP55196 1824 aaKnown RBP13.11□□□□□ -0.31
PXN-216ENST00000550205 STARD3NLO95772 234 aa13.11□□□□□ -0.31
PXN-216ENST00000550205 EIF5P55010 431 aaKnown RBP13.11□□□□□ -0.31
PXN-216ENST00000550205 TTC5Q8N0Z6 440 aa13.11□□□□□ -0.31
PXN-216ENST00000550205 DNAJC5GQ8N7S2 189 aa13.11□□□□□ -0.31
PXN-216ENST00000550205 DLEC1Q9Y238 1755 aa13.11□□□□□ -0.31
PXN-216ENST00000550205 PCNTO95613 3336 aa13.11□□□□□ -0.31
PXN-216ENST00000550205 KDM2BQ8NHM5 1336 aa13.11□□□□□ -0.31
PXN-216ENST00000550205 ZC3H4Q9UPT8 1303 aaKnown RBP13.11□□□□□ -0.31
PXN-216ENST00000550205 CEMIPQ8WUJ3 1361 aa13.1□□□□□ -0.31
PXN-216ENST00000550205 SIPA1L3O60292 1781 aaPredicted RBP13.1□□□□□ -0.31
PXN-216ENST00000550205 GNAT3A8MTJ3 354 aa13.1□□□□□ -0.31
PXN-216ENST00000550205 SERPINB2P05120 415 aa13.1□□□□□ -0.31
PXN-216ENST00000550205 ZNF790Q6PG37 636 aa13.1□□□□□ -0.31
PXN-216ENST00000550205 IL17REQ8NFR9 667 aa13.1□□□□□ -0.31
PXN-216ENST00000550205 GAS2L2Q8NHY3 880 aa13.1□□□□□ -0.31
PXN-216ENST00000550205 TEX13AQ9BXU3 409 aaPredicted RBP13.1□□□□□ -0.31
PXN-216ENST00000550205 RNF181Q9P0P0 153 aa13.1□□□□□ -0.31
PXN-216ENST00000550205 HEG1Q9ULI3 1381 aa13.09□□□□□ -0.31
PXN-216ENST00000550205 A0A087WZG4 1122 aa13.09□□□□□ -0.31
PXN-216ENST00000550205 SBF1O95248 1867 aa13.09□□□□□ -0.31
PXN-216ENST00000550205 FSTL1Q12841 308 aa13.09□□□□□ -0.31
PXN-216ENST00000550205 ZNF496Q96IT1 587 aaPredicted RBP13.09□□□□□ -0.31
PXN-216ENST00000550205 TNRC6CQ9HCJ0 1690 aaKnown RBP13.08□□□□□ -0.31
PXN-216ENST00000550205 U2SURPO15042 1029 aaKnown RBP13.08□□□□□ -0.32
PXN-216ENST00000550205 CANXP27824 592 aaKnown RBP13.08□□□□□ -0.32
PXN-216ENST00000550205 TEFQ10587 303 aa13.08□□□□□ -0.32
PXN-216ENST00000550205 SCN7AQ01118 1682 aa13.08□□□□□ -0.32
PXN-216ENST00000550205 CARMIL3Q8ND23 1372 aa13.07□□□□□ -0.32
PXN-216ENST00000550205 IL6STP40189 918 aaPredicted RBP13.07□□□□□ -0.32
PXN-216ENST00000550205 C16orf71Q8IYS4 520 aaPredicted RBP13.07□□□□□ -0.32
PXN-216ENST00000550205 TTLL6Q8N841 843 aa13.07□□□□□ -0.32
PXN-216ENST00000550205 WDR90Q96KV7 1748 aa13.06□□□□□ -0.32
PXN-216ENST00000550205 H0YIN7 160 aa13.06□□□□□ -0.32
PXN-216ENST00000550205 LMNB1P20700 586 aa13.06□□□□□ -0.32
PXN-216ENST00000550205 PRELPP51888 382 aa13.06□□□□□ -0.32
PXN-216ENST00000550205 RASSF7Q02833 373 aa13.06□□□□□ -0.32
PXN-216ENST00000550205 TBC1D9BQ66K14 1250 aa13.06□□□□□ -0.32
PXN-216ENST00000550205 C2CD5Q86YS7 1000 aa13.06□□□□□ -0.32
PXN-216ENST00000550205 FMNL2Q96PY5 1086 aa13.06□□□□□ -0.32
PXN-216ENST00000550205 RSPH6AQ9H0K4 717 aa13.06□□□□□ -0.32
PXN-216ENST00000550205 PDZRN3Q9UPQ7 1066 aa13.06□□□□□ -0.32
PXN-216ENST00000550205 PHACTR3Q96KR7 559 aa13.05□□□□□ -0.32
PXN-216ENST00000550205 BRIP1Q9BX63 1249 aa13.05□□□□□ -0.32
PXN-216ENST00000550205 RRAGCQ9HB90 399 aa13.05□□□□□ -0.32
PXN-216ENST00000550205 GLTPD2A6NH11 291 aa13.04□□□□□ -0.32
PXN-216ENST00000550205 PRKAR2BP31323 418 aa13.04□□□□□ -0.32
PXN-216ENST00000550205 PDE6BP35913 854 aa13.04□□□□□ -0.32
PXN-216ENST00000550205 PRR5LQ6MZQ0 368 aa13.04□□□□□ -0.32
PXN-216ENST00000550205 BICDL1Q6ZP65 573 aa13.04□□□□□ -0.32
PXN-216ENST00000550205 ANKRD31Q8N7Z5 1873 aa13.04□□□□□ -0.32
PXN-216ENST00000550205 BTBD11A6QL63 1104 aa13.03□□□□□ -0.32
PXN-216ENST00000550205 NFKBIEO00221 500 aa13.03□□□□□ -0.32
PXN-216ENST00000550205 CFAP53Q96M91 514 aa13.03□□□□□ -0.32
PXN-216ENST00000550205 TBC1D2BQ9UPU7 963 aa13.03□□□□□ -0.32
PXN-216ENST00000550205 CAMTA2O94983 1202 aa13.02□□□□□ -0.33
PXN-216ENST00000550205 A1BGP04217 495 aa13.02□□□□□ -0.33
PXN-216ENST00000550205 SMC1BQ8NDV3 1235 aa13.02□□□□□ -0.33
PXN-216ENST00000550205 KLRG1Q96E93 195 aa13.02□□□□□ -0.33
PXN-216ENST00000550205 COL11A2P13942 1736 aaPredicted RBP13.02□□□□□ -0.33
PXN-216ENST00000550205 TIAM2Q8IVF5 1701 aa13.02□□□□□ -0.33
PXN-216ENST00000550205 BCORQ6W2J9 1755 aa13.02□□□□□ -0.33
PXN-216ENST00000550205 RGL2O15211 777 aa13.01□□□□□ -0.33
PXN-216ENST00000550205 KCNQ3O43525 872 aa13.01□□□□□ -0.33
PXN-216ENST00000550205 VEGFAP15692 232 aaPredicted RBP13.01□□□□□ -0.33
PXN-216ENST00000550205 JMYQ8N9B5 988 aa13.01□□□□□ -0.33
PXN-216ENST00000550205 SETDB2Q96T68 719 aa13.01□□□□□ -0.33
PXN-216ENST00000550205 NUDCQ9Y266 331 aa13.01□□□□□ -0.33
PXN-216ENST00000550205 LTBP3Q9NS15 1303 aa13□□□□□ -0.33
PXN-216ENST00000550205 HTATSF1O43719 755 aaKnown RBP13□□□□□ -0.33
PXN-216ENST00000550205 PPP2R1AP30153 589 aa13□□□□□ -0.33
PXN-216ENST00000550205 CNGB1Q14028 1251 aaPredicted RBP13□□□□□ -0.33
PXN-216ENST00000550205 CLEC4GQ6UXB4 293 aa13□□□□□ -0.33
PXN-216ENST00000550205 NPM2Q86SE8 214 aaKnown RBP13□□□□□ -0.33
PXN-216ENST00000550205 DZIP3Q86Y13 1208 aaKnown RBP13□□□□□ -0.33
PXN-216ENST00000550205 ZNF330Q9Y3S2 320 aaPredicted RBP13□□□□□ -0.33
PXN-216ENST00000550205 USP16Q9Y5T5 823 aa13□□□□□ -0.33
PXN-216ENST00000550205 FER1L6Q2WGJ9 1857 aa12.99□□□□□ -0.33
PXN-216ENST00000550205 C21orf2O43822 256 aa12.99□□□□□ -0.33
PXN-216ENST00000550205 SRGNP10124 158 aa12.99□□□□□ -0.33
PXN-216ENST00000550205 HTRA3P83110 453 aa12.99□□□□□ -0.33
PXN-216ENST00000550205 STYK1Q6J9G0 422 aa12.99□□□□□ -0.33
PXN-216ENST00000550205 CNBD1Q8NA66 436 aa12.99□□□□□ -0.33
PXN-216ENST00000550205 ZNF622Q969S3 477 aaKnown RBP eCLIP12.99□□□□□ -0.33
PXN-216ENST00000550205 POTECB2RU33 542 aa12.98□□□□□ -0.33
PXN-216ENST00000550205 SNRPA1P09661 255 aaKnown RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms