RNA–Protein interactions for RNA: ENST00000550077.1

AC055716.1-201, humanhuman

BASIC

Gene AC055716.1, Length 495 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055716.1-201ENST00000550077 VIRMAQ69YN4 1812 aaKnown RBP12.07□□□□□ -0.48
AC055716.1-201ENST00000550077 AEBP1Q8IUX7 1158 aa12.07□□□□□ -0.48
AC055716.1-201ENST00000550077 NFATC2IPQ8NCF5 419 aa12.07□□□□□ -0.48
AC055716.1-201ENST00000550077 BCL2L12Q9HB09 334 aa12.07□□□□□ -0.48
AC055716.1-201ENST00000550077 SCN11AQ9UI33 1791 aa12.07□□□□□ -0.48
AC055716.1-201ENST00000550077 CACNA1SQ13698 1873 aa12.06□□□□□ -0.48
AC055716.1-201ENST00000550077 LMNB1P20700 586 aa12.06□□□□□ -0.48
AC055716.1-201ENST00000550077 CABP4P57796 275 aa12.06□□□□□ -0.48
AC055716.1-201ENST00000550077 NFIXQ14938 502 aa12.06□□□□□ -0.48
AC055716.1-201ENST00000550077 DNAJC10Q8IXB1 793 aa12.06□□□□□ -0.48
AC055716.1-201ENST00000550077 FER1L6Q2WGJ9 1857 aa12.06□□□□□ -0.48
AC055716.1-201ENST00000550077 COL11A2P13942 1736 aaPredicted RBP12.06□□□□□ -0.48
AC055716.1-201ENST00000550077 SLC34A2O95436 690 aa12.05□□□□□ -0.48
AC055716.1-201ENST00000550077 ZNF530Q6P9A1 599 aaPredicted RBP12.05□□□□□ -0.48
AC055716.1-201ENST00000550077 ZNF219Q9P2Y4 722 aaPredicted RBP12.05□□□□□ -0.48
AC055716.1-201ENST00000550077 CCDC24Q8N4L8 307 aa12.04□□□□□ -0.48
AC055716.1-201ENST00000550077 C2CD5Q86YS7 1000 aa12.03□□□□□ -0.48
AC055716.1-201ENST00000550077 SOS1Q07889 1333 aaPredicted RBP12.03□□□□□ -0.48
AC055716.1-201ENST00000550077 SERPINB2P05120 415 aa12.02□□□□□ -0.49
AC055716.1-201ENST00000550077 MTHFSP49914 203 aa12.02□□□□□ -0.49
AC055716.1-201ENST00000550077 PLEKHO1Q53GL0 409 aaPredicted RBP12.02□□□□□ -0.49
AC055716.1-201ENST00000550077 ZC3H4Q9UPT8 1303 aaKnown RBP12.02□□□□□ -0.49
AC055716.1-201ENST00000550077 SLX4Q8IY92 1834 aa12.02□□□□□ -0.49
AC055716.1-201ENST00000550077 DDNO94850 711 aaPredicted RBP12.01□□□□□ -0.49
AC055716.1-201ENST00000550077 CYP19A1P11511 503 aaPredicted RBP12.01□□□□□ -0.49
AC055716.1-201ENST00000550077 SLC39A6Q13433 755 aa12.01□□□□□ -0.49
AC055716.1-201ENST00000550077 TTLL6Q8N841 843 aa12.01□□□□□ -0.49
AC055716.1-201ENST00000550077 LGR6Q9HBX8 967 aa12.01□□□□□ -0.49
AC055716.1-201ENST00000550077 CREBZFQ9NS37 354 aa12.01□□□□□ -0.49
AC055716.1-201ENST00000550077 ZBTB1Q9Y2K1 713 aa12.01□□□□□ -0.49
AC055716.1-201ENST00000550077 C21orf2O43822 256 aa12□□□□□ -0.49
AC055716.1-201ENST00000550077 ZPR1O75312 459 aa12□□□□□ -0.49
AC055716.1-201ENST00000550077 HSP90AB1P08238 724 aaKnown RBP12□□□□□ -0.49
AC055716.1-201ENST00000550077 VEGFBP49765 207 aa12□□□□□ -0.49
AC055716.1-201ENST00000550077 CHADLQ6NUI6 762 aa12□□□□□ -0.49
AC055716.1-201ENST00000550077 BICDL1Q6ZP65 573 aa12□□□□□ -0.49
AC055716.1-201ENST00000550077 NARFQ9UHQ1 456 aa12□□□□□ -0.49
AC055716.1-201ENST00000550077 CNTNAP1P78357 1384 aa12□□□□□ -0.49
AC055716.1-201ENST00000550077 SLC24A1O60721 1099 aa11.99□□□□□ -0.49
AC055716.1-201ENST00000550077 COL15A1P39059 1388 aa11.99□□□□□ -0.49
AC055716.1-201ENST00000550077 PASKQ96RG2 1323 aa11.98□□□□□ -0.49
AC055716.1-201ENST00000550077 LBX1P52954 281 aa11.98□□□□□ -0.49
AC055716.1-201ENST00000550077 FAM161AQ3B820 660 aa11.98□□□□□ -0.49
AC055716.1-201ENST00000550077 ERFEQ4G0M1 354 aa11.98□□□□□ -0.49
AC055716.1-201ENST00000550077 H0YIN7 160 aa11.97□□□□□ -0.49
AC055716.1-201ENST00000550077 CANXP27824 592 aaKnown RBP11.97□□□□□ -0.49
AC055716.1-201ENST00000550077 AMOTQ4VCS5 1084 aa11.97□□□□□ -0.49
AC055716.1-201ENST00000550077 TBC1D9BQ66K14 1250 aa11.97□□□□□ -0.49
AC055716.1-201ENST00000550077 SULT6B1Q6IMI4 303 aa11.97□□□□□ -0.49
AC055716.1-201ENST00000550077 DPY19L2Q6NUT2 758 aa11.97□□□□□ -0.49
AC055716.1-201ENST00000550077 ZNF622Q969S3 477 aaKnown RBP eCLIP11.97□□□□□ -0.49
AC055716.1-201ENST00000550077 PRDM10Q9NQV6 1147 aa11.97□□□□□ -0.49
AC055716.1-201ENST00000550077 UBR2Q8IWV8 1755 aa11.97□□□□□ -0.49
AC055716.1-201ENST00000550077 ITGBL1O95965 494 aaPredicted RBP11.96□□□□□ -0.49
AC055716.1-201ENST00000550077 C1orf141Q5JVX7 400 aa11.96□□□□□ -0.49
AC055716.1-201ENST00000550077 ADAMTSL1Q8N6G6 1762 aa11.96□□□□□ -0.49
AC055716.1-201ENST00000550077 ARFGEF2Q9Y6D5 1785 aa11.95□□□□□ -0.5
AC055716.1-201ENST00000550077 CTCFP49711 727 aaPredicted RBP11.95□□□□□ -0.5
AC055716.1-201ENST00000550077 ABHD8Q96I13 439 aa11.95□□□□□ -0.5
AC055716.1-201ENST00000550077 POLR3GLQ9BT43 218 aa11.95□□□□□ -0.5
AC055716.1-201ENST00000550077 SLC52A2Q9HAB3 445 aa11.95□□□□□ -0.5
AC055716.1-201ENST00000550077 WBP1LQ9NX94 342 aa11.95□□□□□ -0.5
AC055716.1-201ENST00000550077 SCN4AP35499 1836 aa11.95□□□□□ -0.5
AC055716.1-201ENST00000550077 SCN7AQ01118 1682 aa11.94□□□□□ -0.5
AC055716.1-201ENST00000550077 HSPA8P11142 646 aaKnown RBP11.94□□□□□ -0.5
AC055716.1-201ENST00000550077 FMR1Q06787 632 aaKnown RBP eCLIP11.94□□□□□ -0.5
AC055716.1-201ENST00000550077 CDCA8Q53HL2 280 aa11.94□□□□□ -0.5
AC055716.1-201ENST00000550077 PRR5LQ6MZQ0 368 aa11.94□□□□□ -0.5
AC055716.1-201ENST00000550077 OLFM4Q6UX06 510 aa11.94□□□□□ -0.5
AC055716.1-201ENST00000550077 MRC1P22897 1456 aa11.94□□□□□ -0.5
AC055716.1-201ENST00000550077 ZNF541Q9H0D2 1346 aa11.93□□□□□ -0.5
AC055716.1-201ENST00000550077 RNMTO43148 476 aaKnown RBP11.93□□□□□ -0.5
AC055716.1-201ENST00000550077 TAF1DQ9H5J8 278 aaPredicted RBP11.93□□□□□ -0.5
AC055716.1-201ENST00000550077 IL13P35225 146 aa11.92□□□□□ -0.5
AC055716.1-201ENST00000550077 EIF5P55010 431 aaKnown RBP11.92□□□□□ -0.5
AC055716.1-201ENST00000550077 TBC1D2BQ9UPU7 963 aa11.92□□□□□ -0.5
AC055716.1-201ENST00000550077 TMEM88BA6NKF7 163 aa11.91□□□□□ -0.5
AC055716.1-201ENST00000550077 EAPPQ56P03 285 aaPredicted RBP11.91□□□□□ -0.5
AC055716.1-201ENST00000550077 AKAP4Q5JQC9 854 aa11.91□□□□□ -0.5
AC055716.1-201ENST00000550077 MAP1SQ66K74 1059 aaPredicted RBP11.91□□□□□ -0.5
AC055716.1-201ENST00000550077 BRIP1Q9BX63 1249 aa11.91□□□□□ -0.5
AC055716.1-201ENST00000550077 TAOK3Q9H2K8 898 aa11.91□□□□□ -0.5
AC055716.1-201ENST00000550077 LTBP1Q14766 1721 aa11.91□□□□□ -0.5
AC055716.1-201ENST00000550077 LTBP3Q9NS15 1303 aa11.9□□□□□ -0.5
AC055716.1-201ENST00000550077 PRPF40BQ6NWY9 871 aaKnown RBP11.9□□□□□ -0.5
AC055716.1-201ENST00000550077 LDHDQ86WU2 507 aa11.9□□□□□ -0.5
AC055716.1-201ENST00000550077 C7orf43Q8WVR3 580 aa11.9□□□□□ -0.5
AC055716.1-201ENST00000550077 AIDAQ96BJ3 306 aa11.9□□□□□ -0.5
AC055716.1-201ENST00000550077 PANK3Q9H999 370 aa11.9□□□□□ -0.5
AC055716.1-201ENST00000550077 SIPA1L3O60292 1781 aaPredicted RBP11.9□□□□□ -0.51
AC055716.1-201ENST00000550077 BCORQ6W2J9 1755 aa11.9□□□□□ -0.51
AC055716.1-201ENST00000550077 HMOX1P09601 288 aa11.89□□□□□ -0.51
AC055716.1-201ENST00000550077 MTHFSDQ2M296 383 aaKnown RBP11.89□□□□□ -0.51
AC055716.1-201ENST00000550077 SLC51AQ86UW1 340 aa11.89□□□□□ -0.51
AC055716.1-201ENST00000550077 L3MBTL3Q96JM7 780 aaPredicted RBP11.89□□□□□ -0.51
AC055716.1-201ENST00000550077 ZNF330Q9Y3S2 320 aaPredicted RBP11.89□□□□□ -0.51
AC055716.1-201ENST00000550077 WDR33Q9C0J8 1336 aaKnown RBP11.88□□□□□ -0.51
AC055716.1-201ENST00000550077 COL4A5P29400 1685 aa11.88□□□□□ -0.51
AC055716.1-201ENST00000550077 RASSF10A6NK89 507 aa11.88□□□□□ -0.51
AC055716.1-201ENST00000550077 CCDC85CA6NKD9 419 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms