RNA–Protein interactions for RNA: ENST00000550011.5

DNM1L-222, Transcript of dynamin 1 like, human

TSL 4

Gene DNM1L, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DNM1L-222	ENST00000550011	PIM2	Q9P1W9	311 aa		13.88	□□□□□ -0.19
DNM1L-222	ENST00000550011	C10orf71	Q711Q0	1435 aa		13.88	□□□□□ -0.19
DNM1L-222	ENST00000550011	USP42	Q9H9J4	1324 aa	Known RBP	13.88	□□□□□ -0.19
DNM1L-222	ENST00000550011	KIF3C	O14782	793 aa		13.87	□□□□□ -0.19
DNM1L-222	ENST00000550011	DIAPH1	O60610	1272 aa	Known RBP	13.87	□□□□□ -0.19
DNM1L-222	ENST00000550011	KCNA3	P22001	575 aa		13.86	□□□□□ -0.19
DNM1L-222	ENST00000550011	DDR1	Q08345	913 aa		13.86	□□□□□ -0.19
DNM1L-222	ENST00000550011	MTHFSD	Q2M296	383 aa	Known RBP	13.86	□□□□□ -0.19
DNM1L-222	ENST00000550011	DALRD3	Q5D0E6	543 aa	Known RBP	13.86	□□□□□ -0.19
DNM1L-222	ENST00000550011	USPL1	Q5W0Q7	1092 aa		13.86	□□□□□ -0.19
DNM1L-222	ENST00000550011	CHRNA5	P30532	468 aa		13.85	□□□□□ -0.19
DNM1L-222	ENST00000550011	C9orf131	Q5VYM1	1079 aa		13.85	□□□□□ -0.19
DNM1L-222	ENST00000550011	N4BP2	Q86UW6	1770 aa	Predicted RBP	13.85	□□□□□ -0.19
DNM1L-222	ENST00000550011	MYH14	Q7Z406	1995 aa	Known RBP	13.85	□□□□□ -0.19
DNM1L-222	ENST00000550011	ZNF831	Q5JPB2	1677 aa		13.85	□□□□□ -0.19
DNM1L-222	ENST00000550011	U2SURP	O15042	1029 aa	Known RBP	13.84	□□□□□ -0.19
DNM1L-222	ENST00000550011	PER1	O15534	1290 aa	Predicted RBP	13.84	□□□□□ -0.19
DNM1L-222	ENST00000550011	CYP19A1	P11511	503 aa	Predicted RBP	13.84	□□□□□ -0.19
DNM1L-222	ENST00000550011	TM4SF1	P30408	202 aa		13.84	□□□□□ -0.19
DNM1L-222	ENST00000550011	C4A	P0C0L4	1744 aa		13.84	□□□□□ -0.19
DNM1L-222	ENST00000550011	COL5A3	P25940	1745 aa	Predicted RBP	13.84	□□□□□ -0.19
DNM1L-222	ENST00000550011	POLRMT	O00411	1230 aa	Known RBP	13.83	□□□□□ -0.2
DNM1L-222	ENST00000550011	CANX	P27824	592 aa	Known RBP	13.83	□□□□□ -0.2
DNM1L-222	ENST00000550011	NMRK2	Q9NPI5	230 aa		13.83	□□□□□ -0.2
DNM1L-222	ENST00000550011	SOS1	Q07889	1333 aa	Predicted RBP	13.83	□□□□□ -0.2
DNM1L-222	ENST00000550011	TOMM70	O94826	608 aa		13.82	□□□□□ -0.2
DNM1L-222	ENST00000550011	REM2	Q8IYK8	340 aa	Predicted RBP	13.82	□□□□□ -0.2
DNM1L-222	ENST00000550011	TTC5	Q8N0Z6	440 aa		13.82	□□□□□ -0.2
DNM1L-222	ENST00000550011	NARF	Q9UHQ1	456 aa		13.82	□□□□□ -0.2
DNM1L-222	ENST00000550011	ZBTB1	Q9Y2K1	713 aa		13.82	□□□□□ -0.2
DNM1L-222	ENST00000550011	KIF13B	Q9NQT8	1826 aa		13.81	□□□□□ -0.2
DNM1L-222	ENST00000550011	NFIX	Q14938	502 aa		13.81	□□□□□ -0.2
DNM1L-222	ENST00000550011	C16orf71	Q8IYS4	520 aa	Predicted RBP	13.81	□□□□□ -0.2
DNM1L-222	ENST00000550011	RNF181	Q9P0P0	153 aa		13.81	□□□□□ -0.2
DNM1L-222	ENST00000550011	STARD3NL	O95772	234 aa		13.8	□□□□□ -0.2
DNM1L-222	ENST00000550011	SERPINB2	P05120	415 aa		13.8	□□□□□ -0.2
DNM1L-222	ENST00000550011	TEF	Q10587	303 aa		13.8	□□□□□ -0.2
DNM1L-222	ENST00000550011	BICDL1	Q6ZP65	573 aa		13.8	□□□□□ -0.2
DNM1L-222	ENST00000550011	VSIG10	Q8N0Z9	540 aa		13.8	□□□□□ -0.2
DNM1L-222	ENST00000550011	TJP1	Q07157	1748 aa		13.79	□□□□□ -0.2
DNM1L-222	ENST00000550011	KIAA1551	Q9HCM1	1747 aa		13.79	□□□□□ -0.2
DNM1L-222	ENST00000550011	SCN11A	Q9UI33	1791 aa		13.79	□□□□□ -0.2
DNM1L-222	ENST00000550011	GNAT3	A8MTJ3	354 aa		13.79	□□□□□ -0.2
DNM1L-222	ENST00000550011	APLP1	P51693	650 aa		13.79	□□□□□ -0.2
DNM1L-222	ENST00000550011	GAS2L2	Q8NHY3	880 aa		13.79	□□□□□ -0.2
DNM1L-222	ENST00000550011	ZNF330	Q9Y3S2	320 aa	Predicted RBP	13.79	□□□□□ -0.2
DNM1L-222	ENST00000550011	COL15A1	P39059	1388 aa		13.79	□□□□□ -0.2
DNM1L-222	ENST00000550011	BCL2L12	Q9HB09	334 aa		13.78	□□□□□ -0.2
DNM1L-222	ENST00000550011		A0A087WZG4	1122 aa		13.77	□□□□□ -0.21
DNM1L-222	ENST00000550011	IFFO2	Q5TF58	517 aa		13.77	□□□□□ -0.21
DNM1L-222	ENST00000550011	NPM2	Q86SE8	214 aa	Known RBP	13.77	□□□□□ -0.21
DNM1L-222	ENST00000550011	C2CD5	Q86YS7	1000 aa		13.77	□□□□□ -0.21
DNM1L-222	ENST00000550011	IL17RE	Q8NFR9	667 aa		13.77	□□□□□ -0.21
DNM1L-222	ENST00000550011	KDM2B	Q8NHM5	1336 aa		13.77	□□□□□ -0.21
DNM1L-222	ENST00000550011	ZNF496	Q96IT1	587 aa	Predicted RBP	13.77	□□□□□ -0.21
DNM1L-222	ENST00000550011	RRAGC	Q9HB90	399 aa		13.77	□□□□□ -0.21
DNM1L-222	ENST00000550011	CEP350	Q5VT06	3117 aa		13.77	□□□□□ -0.21
DNM1L-222	ENST00000550011		H0YIN7	160 aa		13.76	□□□□□ -0.21
DNM1L-222	ENST00000550011	ZNF790	Q6PG37	636 aa		13.76	□□□□□ -0.21
DNM1L-222	ENST00000550011	TTLL6	Q8N841	843 aa		13.76	□□□□□ -0.21
DNM1L-222	ENST00000550011	TEX13A	Q9BXU3	409 aa	Predicted RBP	13.76	□□□□□ -0.21
DNM1L-222	ENST00000550011	TBC1D2B	Q9UPU7	963 aa		13.76	□□□□□ -0.21
DNM1L-222	ENST00000550011	KCP	Q6ZWJ8	1503 aa		13.75	□□□□□ -0.21
DNM1L-222	ENST00000550011	MRC1	P22897	1456 aa		13.75	□□□□□ -0.21
DNM1L-222	ENST00000550011	EIF5	P55010	431 aa	Known RBP	13.75	□□□□□ -0.21
DNM1L-222	ENST00000550011	RASSF7	Q02833	373 aa		13.75	□□□□□ -0.21
DNM1L-222	ENST00000550011	RBM46	Q8TBY0	533 aa	Known RBP	13.75	□□□□□ -0.21
DNM1L-222	ENST00000550011	CFAP53	Q96M91	514 aa		13.75	□□□□□ -0.21
DNM1L-222	ENST00000550011	NPHP1	O15259	732 aa		13.74	□□□□□ -0.21
DNM1L-222	ENST00000550011	PRKAR2B	P31323	418 aa		13.74	□□□□□ -0.21
DNM1L-222	ENST00000550011	TBC1D9B	Q66K14	1250 aa		13.74	□□□□□ -0.21
DNM1L-222	ENST00000550011	ZNF622	Q969S3	477 aa	Known RBP eCLIP	13.74	□□□□□ -0.21	2e-7	■□□□□ 9
DNM1L-222	ENST00000550011	PHACTR3	Q96KR7	559 aa		13.74	□□□□□ -0.21
DNM1L-222	ENST00000550011	FMNL2	Q96PY5	1086 aa		13.74	□□□□□ -0.21
DNM1L-222	ENST00000550011	NPC1L1	Q9UHC9	1359 aa		13.73	□□□□□ -0.21
DNM1L-222	ENST00000550011	HEG1	Q9ULI3	1381 aa		13.73	□□□□□ -0.21
DNM1L-222	ENST00000550011	BTBD11	A6QL63	1104 aa		13.73	□□□□□ -0.21
DNM1L-222	ENST00000550011	A1BG	P04217	495 aa		13.73	□□□□□ -0.21
DNM1L-222	ENST00000550011	LMNB1	P20700	586 aa		13.73	□□□□□ -0.21
DNM1L-222	ENST00000550011	CCDC24	Q8N4L8	307 aa		13.73	□□□□□ -0.21
DNM1L-222	ENST00000550011	NUDC	Q9Y266	331 aa		13.73	□□□□□ -0.21
DNM1L-222	ENST00000550011	BRCA1	P38398	1863 aa	Known RBP	13.72	□□□□□ -0.21
DNM1L-222	ENST00000550011	KCNQ3	O43525	872 aa		13.72	□□□□□ -0.21
DNM1L-222	ENST00000550011	IL6ST	P40189	918 aa	Predicted RBP	13.72	□□□□□ -0.21
DNM1L-222	ENST00000550011	ADAMTS7	Q9UKP4	1686 aa		13.72	□□□□□ -0.21
DNM1L-222	ENST00000550011	U2AF1L5	P0DN76	240 aa	Predicted RBP	13.71	□□□□□ -0.21
DNM1L-222	ENST00000550011	HTRA3	P83110	453 aa		13.71	□□□□□ -0.21
DNM1L-222	ENST00000550011	U2AF1	Q01081	240 aa	Known RBP eCLIP	13.71	□□□□□ -0.21
DNM1L-222	ENST00000550011	FSTL1	Q12841	308 aa		13.71	□□□□□ -0.21
DNM1L-222	ENST00000550011	DNAJC5G	Q8N7S2	189 aa		13.71	□□□□□ -0.21
DNM1L-222	ENST00000550011	SPDYE1	Q8NFV5	336 aa	Predicted RBP	13.71	□□□□□ -0.21
DNM1L-222	ENST00000550011	RTF1	Q92541	710 aa	Known RBP	13.71	□□□□□ -0.21
DNM1L-222	ENST00000550011	ARFGEF1	Q9Y6D6	1849 aa		13.71	□□□□□ -0.22
DNM1L-222	ENST00000550011	CARMIL3	Q8ND23	1372 aa		13.71	□□□□□ -0.22
DNM1L-222	ENST00000550011	COL3A1	P02461	1466 aa	Predicted RBP	13.7	□□□□□ -0.22
DNM1L-222	ENST00000550011	PDE6B	P35913	854 aa		13.7	□□□□□ -0.22
DNM1L-222	ENST00000550011	SETDB2	Q96T68	719 aa		13.7	□□□□□ -0.22
DNM1L-222	ENST00000550011	BRIP1	Q9BX63	1249 aa		13.7	□□□□□ -0.22
DNM1L-222	ENST00000550011	RSPH6A	Q9H0K4	717 aa		13.7	□□□□□ -0.22
DNM1L-222	ENST00000550011	C21orf2	O43822	256 aa		13.69	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms