RNA–Protein interactions for RNA: ENST00000549770.1

NPAS3-207, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 3

Gene NPAS3, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-207ENST00000549770 EIF5BO60841 1220 aaKnown RBP8.72□□□□□ -1.01
NPAS3-207ENST00000549770 POTEBQ6S5H4 581 aa8.72□□□□□ -1.01
NPAS3-207ENST00000549770 ZCRB1Q8TBF4 217 aaKnown RBP8.72□□□□□ -1.01
NPAS3-207ENST00000549770 RAPGEF4Q8WZA2 1011 aa8.72□□□□□ -1.01
NPAS3-207ENST00000549770 LARP6Q9BRS8 491 aaKnown RBP8.72□□□□□ -1.01
NPAS3-207ENST00000549770 PCDHGA4Q9Y5G9 962 aa8.72□□□□□ -1.01
NPAS3-207ENST00000549770 BTAF1O14981 1849 aa8.72□□□□□ -1.01
NPAS3-207ENST00000549770 WASHC2AQ641Q2 1341 aa8.72□□□□□ -1.01
NPAS3-207ENST00000549770 KIF24Q5T7B8 1368 aa8.72□□□□□ -1.01
NPAS3-207ENST00000549770 BCL9O00512 1426 aa8.71□□□□□ -1.01
NPAS3-207ENST00000549770 DOT1LQ8TEK3 1739 aa8.71□□□□□ -1.01
NPAS3-207ENST00000549770 TATP17735 454 aaPredicted RBP8.71□□□□□ -1.02
NPAS3-207ENST00000549770 EIF4A2Q14240 407 aaKnown RBP8.71□□□□□ -1.02
NPAS3-207ENST00000549770 PPP1R15BQ5SWA1 713 aa8.71□□□□□ -1.02
NPAS3-207ENST00000549770 CC2D1BQ5T0F9 858 aaKnown RBP8.71□□□□□ -1.02
NPAS3-207ENST00000549770 SYTL4Q96C24 671 aaPredicted RBP8.71□□□□□ -1.02
NPAS3-207ENST00000549770 NSD2O96028 1365 aa8.71□□□□□ -1.02
NPAS3-207ENST00000549770 PARD3Q8TEW0 1356 aa8.71□□□□□ -1.02
NPAS3-207ENST00000549770 NUDT7P0C024 238 aa8.7□□□□□ -1.02
NPAS3-207ENST00000549770 EYA1Q99502 592 aa8.7□□□□□ -1.02
NPAS3-207ENST00000549770 RGPD3A6NKT7 1758 aaPredicted RBP8.7□□□□□ -1.02
NPAS3-207ENST00000549770 RGPD4Q7Z3J3 1758 aa8.7□□□□□ -1.02
NPAS3-207ENST00000549770 PLSCR1O15162 318 aa8.69□□□□□ -1.02
NPAS3-207ENST00000549770 PRIM1P49642 420 aaKnown RBP8.69□□□□□ -1.02
NPAS3-207ENST00000549770 TXNRD1Q16881 649 aa8.69□□□□□ -1.02
NPAS3-207ENST00000549770 VARS2Q5ST30 1063 aaKnown RBP8.69□□□□□ -1.02
NPAS3-207ENST00000549770 DDX27Q96GQ7 796 aaKnown RBP8.69□□□□□ -1.02
NPAS3-207ENST00000549770 KRTAP3-3Q9BYR6 98 aa8.69□□□□□ -1.02
NPAS3-207ENST00000549770 KRTAP3-2Q9BYR7 98 aa8.69□□□□□ -1.02
NPAS3-207ENST00000549770 ANO8Q9HCE9 1232 aaPredicted RBP8.69□□□□□ -1.02
NPAS3-207ENST00000549770 PER1O15534 1290 aaPredicted RBP8.68□□□□□ -1.02
NPAS3-207ENST00000549770 NBPF14Q5TI25 921 aa8.68□□□□□ -1.02
NPAS3-207ENST00000549770 PKD1L3Q7Z443 1732 aa8.68□□□□□ -1.02
NPAS3-207ENST00000549770 CYP27B1O15528 508 aa8.67□□□□□ -1.02
NPAS3-207ENST00000549770 KCNQ4P56696 695 aa8.67□□□□□ -1.02
NPAS3-207ENST00000549770 NCAPD2Q15021 1401 aa8.67□□□□□ -1.02
NPAS3-207ENST00000549770 VSIG10Q8N0Z9 540 aa8.67□□□□□ -1.02
NPAS3-207ENST00000549770 PTCD2Q8WV60 388 aaKnown RBP8.67□□□□□ -1.02
NPAS3-207ENST00000549770 UBE2Q2Q8WVN8 375 aa8.67□□□□□ -1.02
NPAS3-207ENST00000549770 PCDH11XQ9BZA7 1347 aa8.67□□□□□ -1.02
NPAS3-207ENST00000549770 PCDH11YQ9BZA8 1340 aa8.67□□□□□ -1.02
NPAS3-207ENST00000549770 TOGARAM1Q9Y4F4 1720 aa8.67□□□□□ -1.02
NPAS3-207ENST00000549770 ZNF316A6NFI3 1004 aaPredicted RBP8.66□□□□□ -1.02
NPAS3-207ENST00000549770 TBC1D12O60347 775 aa8.66□□□□□ -1.02
NPAS3-207ENST00000549770 AEBP1Q8IUX7 1158 aa8.66□□□□□ -1.02
NPAS3-207ENST00000549770 PDGFDQ9GZP0 370 aaPredicted RBP8.66□□□□□ -1.02
NPAS3-207ENST00000549770 LRP5O75197 1615 aa8.65□□□□□ -1.02
NPAS3-207ENST00000549770 IGSF1Q8N6C5 1336 aa8.65□□□□□ -1.02
NPAS3-207ENST00000549770 MTHFSP49914 203 aa8.65□□□□□ -1.02
NPAS3-207ENST00000549770 LRRC4BQ9NT99 713 aa8.65□□□□□ -1.02
NPAS3-207ENST00000549770 SPG7Q9UQ90 795 aa8.65□□□□□ -1.02
NPAS3-207ENST00000549770 ITGB4P16144 1822 aa8.65□□□□□ -1.02
NPAS3-207ENST00000549770 MFSD10Q14728 455 aa8.64□□□□□ -1.03
NPAS3-207ENST00000549770 ZNF827Q17R98 1081 aa8.64□□□□□ -1.03
NPAS3-207ENST00000549770 MPRIPQ6WCQ1 1025 aa8.64□□□□□ -1.03
NPAS3-207ENST00000549770 STK32BQ9NY57 414 aa8.64□□□□□ -1.03
NPAS3-207ENST00000549770 LHX6Q9UPM6 363 aa8.64□□□□□ -1.03
NPAS3-207ENST00000549770 PAPPAQ13219 1627 aa8.64□□□□□ -1.03
NPAS3-207ENST00000549770 CASZ1Q86V15 1759 aa8.63□□□□□ -1.03
NPAS3-207ENST00000549770 LY75O60449 1722 aa8.63□□□□□ -1.03
NPAS3-207ENST00000549770 ZBTB7AO95365 584 aa8.63□□□□□ -1.03
NPAS3-207ENST00000549770 IL13P35225 146 aa8.63□□□□□ -1.03
NPAS3-207ENST00000549770 SLC15A2Q16348 729 aa8.63□□□□□ -1.03
NPAS3-207ENST00000549770 SULT6B1Q6IMI4 303 aa8.63□□□□□ -1.03
NPAS3-207ENST00000549770 HMOX1P09601 288 aa8.62□□□□□ -1.03
NPAS3-207ENST00000549770 PHKG2P15735 406 aa8.62□□□□□ -1.03
NPAS3-207ENST00000549770 ZNF530Q6P9A1 599 aaPredicted RBP8.62□□□□□ -1.03
NPAS3-207ENST00000549770 IFNL2Q8IZJ0 200 aa8.62□□□□□ -1.03
NPAS3-207ENST00000549770 OXER1Q8TDS5 423 aa8.62□□□□□ -1.03
NPAS3-207ENST00000549770 TSHZ2Q9NRE2 1034 aa8.62□□□□□ -1.03
NPAS3-207ENST00000549770 CCNL1Q9UK58 526 aaPredicted RBP8.62□□□□□ -1.03
NPAS3-207ENST00000549770 GTF3C3Q9Y5Q9 886 aa8.62□□□□□ -1.03
NPAS3-207ENST00000549770 TUBGCP6Q96RT7 1819 aa8.61□□□□□ -1.03
NPAS3-207ENST00000549770 DIAPH1O60610 1272 aaKnown RBP8.61□□□□□ -1.03
NPAS3-207ENST00000549770 PLEKHO1Q53GL0 409 aaPredicted RBP8.61□□□□□ -1.03
NPAS3-207ENST00000549770 PIGBQ92521 554 aa8.61□□□□□ -1.03
NPAS3-207ENST00000549770 COL3A1P02461 1466 aaPredicted RBP8.61□□□□□ -1.03
NPAS3-207ENST00000549770 GOLGB1Q14789 3259 aaKnown RBP8.61□□□□□ -1.03
NPAS3-207ENST00000549770 PALLDQ8WX93 1383 aa8.61□□□□□ -1.03
NPAS3-207ENST00000549770 NPC1L1Q9UHC9 1359 aa8.61□□□□□ -1.03
NPAS3-207ENST00000549770 C5P01031 1676 aa8.6□□□□□ -1.03
NPAS3-207ENST00000549770 U2SURPO15042 1029 aaKnown RBP8.6□□□□□ -1.03
NPAS3-207ENST00000549770 SLC27A3Q5K4L6 730 aa8.6□□□□□ -1.03
NPAS3-207ENST00000549770 ZNF687Q8N1G0 1237 aa8.6□□□□□ -1.03
NPAS3-207ENST00000549770 SPON1Q9HCB6 807 aa8.6□□□□□ -1.03
NPAS3-207ENST00000549770 TMOD3Q9NYL9 352 aa8.6□□□□□ -1.03
NPAS3-207ENST00000549770 KDRP35968 1356 aa8.6□□□□□ -1.03
NPAS3-207ENST00000549770 TFCP2L1Q9NZI6 479 aa8.59□□□□□ -1.03
NPAS3-207ENST00000549770 PPP1R1BQ9UD71 204 aaPredicted RBP8.59□□□□□ -1.03
NPAS3-207ENST00000549770 ASAP1Q9ULH1 1129 aa8.59□□□□□ -1.03
NPAS3-207ENST00000549770 KDM6AO15550 1401 aaPredicted RBP8.59□□□□□ -1.03
NPAS3-207ENST00000549770 TAF1LQ8IZX4 1826 aa8.59□□□□□ -1.03
NPAS3-207ENST00000549770 PPP2R1AP30153 589 aa8.58□□□□□ -1.04
NPAS3-207ENST00000549770 MAP3K9P80192 1104 aa8.58□□□□□ -1.04
NPAS3-207ENST00000549770 AMOTQ4VCS5 1084 aa8.58□□□□□ -1.04
NPAS3-207ENST00000549770 C1orf141Q5JVX7 400 aa8.58□□□□□ -1.04
NPAS3-207ENST00000549770 SMIM5Q71RC9 77 aa8.58□□□□□ -1.04
NPAS3-207ENST00000549770 PNPLA7Q6ZV29 1317 aa8.57□□□□□ -1.04
NPAS3-207ENST00000549770 VIRMAQ69YN4 1812 aaKnown RBP8.57□□□□□ -1.04
NPAS3-207ENST00000549770 CABP4P57796 275 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms