RNA–Protein interactions for RNA: ENST00000549718.5

LINC00661-205, long intergenic non-protein coding RNA 661, humanhuman

TSL 4

Gene LINC00661, Length 569 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-205ENST00000549718 TGFB2P61812 414 aa21.57■■□□□ 1.04
LINC00661-205ENST00000549718 ZNF790Q6PG37 636 aa21.57■■□□□ 1.04
LINC00661-205ENST00000549718 HEG1Q9ULI3 1381 aa21.57■■□□□ 1.04
LINC00661-205ENST00000549718 ZPR1O75312 459 aa21.56■■□□□ 1.04
LINC00661-205ENST00000549718 DDR1Q08345 913 aa21.56■■□□□ 1.04
LINC00661-205ENST00000549718 USPL1Q5W0Q7 1092 aa21.56■■□□□ 1.04
LINC00661-205ENST00000549718 ZNF496Q96IT1 587 aaPredicted RBP21.56■■□□□ 1.04
LINC00661-205ENST00000549718 FCHSD2O94868 740 aa21.55■■□□□ 1.04
LINC00661-205ENST00000549718 ATP10DQ9P241 1426 aa21.55■■□□□ 1.04
LINC00661-205ENST00000549718 BCORQ6W2J9 1755 aa21.54■■□□□ 1.04
LINC00661-205ENST00000549718 DLEC1Q9Y238 1755 aa21.54■■□□□ 1.04
LINC00661-205ENST00000549718 ADCY9O60503 1353 aa21.54■■□□□ 1.04
LINC00661-205ENST00000549718 A0A0G2JLW4 131 aa21.54■■□□□ 1.04
LINC00661-205ENST00000549718 STARD3NLO95772 234 aa21.53■■□□□ 1.04
LINC00661-205ENST00000549718 CANXP27824 592 aaKnown RBP21.53■■□□□ 1.04
LINC00661-205ENST00000549718 NARFQ9UHQ1 456 aa21.53■■□□□ 1.04
LINC00661-205ENST00000549718 LAMB4A4D0S4 1761 aa21.52■■□□□ 1.04
LINC00661-205ENST00000549718 POLRMTO00411 1230 aaKnown RBP21.52■■□□□ 1.04
LINC00661-205ENST00000549718 DPEP1P16444 411 aa21.52■■□□□ 1.04
LINC00661-205ENST00000549718 FMNL2Q96PY5 1086 aa21.52■■□□□ 1.04
LINC00661-205ENST00000549718 BTBD11A6QL63 1104 aa21.51■■□□□ 1.03
LINC00661-205ENST00000549718 TM4SF1P30408 202 aa21.51■■□□□ 1.03
LINC00661-205ENST00000549718 MCM10Q7L590 875 aa21.51■■□□□ 1.03
LINC00661-205ENST00000549718 RTF1Q92541 710 aaKnown RBP21.51■■□□□ 1.03
LINC00661-205ENST00000549718 BCS1LQ9Y276 419 aa21.51■■□□□ 1.03
LINC00661-205ENST00000549718 KDM3BQ7LBC6 1761 aa21.51■■□□□ 1.03
LINC00661-205ENST00000549718 TEX13AQ9BXU3 409 aaPredicted RBP21.5■■□□□ 1.03
LINC00661-205ENST00000549718 KCNQ3O43525 872 aa21.49■■□□□ 1.03
LINC00661-205ENST00000549718 GIGYF1O75420 1035 aaPredicted RBP21.49■■□□□ 1.03
LINC00661-205ENST00000549718 BCL2L12Q9HB09 334 aa21.49■■□□□ 1.03
LINC00661-205ENST00000549718 EIF5P55010 431 aaKnown RBP21.48■■□□□ 1.03
LINC00661-205ENST00000549718 NFIXQ14938 502 aa21.48■■□□□ 1.03
LINC00661-205ENST00000549718 ANKRD31Q8N7Z5 1873 aa21.47■■□□□ 1.03
LINC00661-205ENST00000549718 A0A087WZG4 1122 aa21.47■■□□□ 1.03
LINC00661-205ENST00000549718 DCTN1Q14203 1278 aa21.47■■□□□ 1.03
LINC00661-205ENST00000549718 ZNF330Q9Y3S2 320 aaPredicted RBP21.47■■□□□ 1.03
LINC00661-205ENST00000549718 HTATSF1O43719 755 aaKnown RBP21.46■■□□□ 1.03
LINC00661-205ENST00000549718 NEFMP07197 916 aa21.46■■□□□ 1.03
LINC00661-205ENST00000549718 KCNA3P22001 575 aa21.46■■□□□ 1.03
LINC00661-205ENST00000549718 C1QTNF8P60827 252 aa21.45■■□□□ 1.02
LINC00661-205ENST00000549718 CHRNA5P30532 468 aa21.44■■□□□ 1.02
LINC00661-205ENST00000549718 IL6STP40189 918 aaPredicted RBP21.44■■□□□ 1.02
LINC00661-205ENST00000549718 PIM2Q9P1W9 311 aa21.44■■□□□ 1.02
LINC00661-205ENST00000549718 COL11A2P13942 1736 aaPredicted RBP21.43■■□□□ 1.02
LINC00661-205ENST00000549718 A1BGP04217 495 aa21.43■■□□□ 1.02
LINC00661-205ENST00000549718 CARMIL3Q8ND23 1372 aa21.43■■□□□ 1.02
LINC00661-205ENST00000549718 PRAMEF22A3QJZ6 481 aa21.42■■□□□ 1.02
LINC00661-205ENST00000549718 SBF1O95248 1867 aa21.42■■□□□ 1.02
LINC00661-205ENST00000549718 SERPINB2P05120 415 aa21.42■■□□□ 1.02
LINC00661-205ENST00000549718 BICDL1Q6ZP65 573 aa21.42■■□□□ 1.02
LINC00661-205ENST00000549718 PLEKHF1Q96S99 279 aa21.42■■□□□ 1.02
LINC00661-205ENST00000549718 GPBP1L1Q9HC44 474 aaPredicted RBP21.42■■□□□ 1.02
LINC00661-205ENST00000549718 TBC1D2BQ9UPU7 963 aa21.42■■□□□ 1.02
LINC00661-205ENST00000549718 RALBP1Q15311 655 aa21.41■■□□□ 1.02
LINC00661-205ENST00000549718 DALRD3Q5D0E6 543 aaKnown RBP21.41■■□□□ 1.02
LINC00661-205ENST00000549718 ARHGAP27Q6ZUM4 889 aa21.41■■□□□ 1.02
LINC00661-205ENST00000549718 ZNF526Q8TF50 670 aaPredicted RBP21.41■■□□□ 1.02
LINC00661-205ENST00000549718 USP16Q9Y5T5 823 aa21.41■■□□□ 1.02
LINC00661-205ENST00000549718 CACNA1SQ13698 1873 aa21.41■■□□□ 1.02
LINC00661-205ENST00000549718 MAPK8IP3Q9UPT6 1336 aa21.4■■□□□ 1.02
LINC00661-205ENST00000549718 SNRPA1P09661 255 aaKnown RBP21.4■■□□□ 1.02
LINC00661-205ENST00000549718 DDX10Q13206 875 aaKnown RBP21.4■■□□□ 1.02
LINC00661-205ENST00000549718 TBC1D9BQ66K14 1250 aa21.4■■□□□ 1.02
LINC00661-205ENST00000549718 NPM2Q86SE8 214 aaKnown RBP21.4■■□□□ 1.02
LINC00661-205ENST00000549718 PIP4K2AP48426 406 aaPredicted RBP21.39■■□□□ 1.01
LINC00661-205ENST00000549718 TAF7Q15545 349 aaPredicted RBP21.39■■□□□ 1.01
LINC00661-205ENST00000549718 NFE2L2Q16236 605 aa21.39■■□□□ 1.01
LINC00661-205ENST00000549718 SENP3-EIF4A1A0A087X0R7 540 aa21.37■■□□□ 1.01
LINC00661-205ENST00000549718 CAMTA2O94983 1202 aa21.37■■□□□ 1.01
LINC00661-205ENST00000549718 DZIP3Q86Y13 1208 aaKnown RBP21.37■■□□□ 1.01
LINC00661-205ENST00000549718 PNNQ9H307 717 aaKnown RBP21.37■■□□□ 1.01
LINC00661-205ENST00000549718 MIS18AQ9NYP9 233 aa21.36■■□□□ 1.01
LINC00661-205ENST00000549718 CCDC88AQ3V6T2 1871 aa21.36■■□□□ 1.01
LINC00661-205ENST00000549718 ARFGEF2Q9Y6D5 1785 aa21.36■■□□□ 1.01
LINC00661-205ENST00000549718 MYBBP1AQ9BQG0 1328 aaKnown RBP21.35■■□□□ 1.01
LINC00661-205ENST00000549718 TIAM2Q8IVF5 1701 aa21.35■■□□□ 1.01
LINC00661-205ENST00000549718 PNISRQ8TF01 805 aaKnown RBP21.34■■□□□ 1.01
LINC00661-205ENST00000549718 THUMPD2Q9BTF0 503 aaKnown RBP21.34■■□□□ 1.01
LINC00661-205ENST00000549718 PRR5LQ6MZQ0 368 aa21.33■■□□□ 1.01
LINC00661-205ENST00000549718 C2CD5Q86YS7 1000 aa21.33■■□□□ 1.01
LINC00661-205ENST00000549718 NUP98P52948 1817 aa21.32■■□□□ 1
LINC00661-205ENST00000549718 NBPF26B4DH59 902 aa21.32■■□□□ 1
LINC00661-205ENST00000549718 C9orf131Q5VYM1 1079 aa21.32■■□□□ 1
LINC00661-205ENST00000549718 NBPF10Q6P3W6 841 aaKnown RBP21.32■■□□□ 1
LINC00661-205ENST00000549718 NBPF15Q8N660 670 aa21.32■■□□□ 1
LINC00661-205ENST00000549718 SETDB2Q96T68 719 aa21.32■■□□□ 1
LINC00661-205ENST00000549718 H0YIN7 160 aa21.31■■□□□ 1
LINC00661-205ENST00000549718 CNBD1Q8NA66 436 aa21.31■■□□□ 1
LINC00661-205ENST00000549718 TNRC6CQ9HCJ0 1690 aaKnown RBP21.31■■□□□ 1
LINC00661-205ENST00000549718 FER1L6Q2WGJ9 1857 aa21.3■■□□□ 1
LINC00661-205ENST00000549718 CCDC24Q8N4L8 307 aa21.3■■□□□ 1
LINC00661-205ENST00000549718 TTLL6Q8N841 843 aa21.3■■□□□ 1
LINC00661-205ENST00000549718 NPHP1O15259 732 aa21.29■■□□□ 1
LINC00661-205ENST00000549718 PDE6BP35913 854 aa21.29■■□□□ 1
LINC00661-205ENST00000549718 CLEC4GQ6UXB4 293 aa21.29■■□□□ 1
LINC00661-205ENST00000549718 BRIP1Q9BX63 1249 aa21.29■■□□□ 1
LINC00661-205ENST00000549718 RNF181Q9P0P0 153 aa21.29■■□□□ 1
LINC00661-205ENST00000549718 ZNF652Q9Y2D9 606 aa21.29■■□□□ 1
LINC00661-205ENST00000549718 KIF3CO14782 793 aa21.28■■□□□ 1
LINC00661-205ENST00000549718 EIF4A1P60842 406 aaKnown RBP21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms