RNA–Protein interactions for RNA: ENST00000549107.5

PTPRR-208, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 2

Gene PTPRR, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-208ENST00000549107 FMNL2Q96PY5 1086 aa14.18□□□□□ -0.14
PTPRR-208ENST00000549107 PHAXQ9H814 394 aaKnown RBP14.18□□□□□ -0.14
PTPRR-208ENST00000549107 KCPQ6ZWJ8 1503 aa14.18□□□□□ -0.14
PTPRR-208ENST00000549107 SLC4A10Q6U841 1118 aa14.17□□□□□ -0.14
PTPRR-208ENST00000549107 C1orf115Q9H7X2 142 aa14.17□□□□□ -0.14
PTPRR-208ENST00000549107 ITGB4P16144 1822 aa14.16□□□□□ -0.14
PTPRR-208ENST00000549107 EXOC5O00471 708 aa14.16□□□□□ -0.14
PTPRR-208ENST00000549107 ANXA1P04083 346 aa14.16□□□□□ -0.14
PTPRR-208ENST00000549107 SNRPA1P09661 255 aaKnown RBP14.16□□□□□ -0.14
PTPRR-208ENST00000549107 PROSER3Q2NL68 480 aa14.16□□□□□ -0.14
PTPRR-208ENST00000549107 UNC5CLQ8IV45 518 aa14.16□□□□□ -0.14
PTPRR-208ENST00000549107 C8orf37Q96NL8 207 aa14.16□□□□□ -0.14
PTPRR-208ENST00000549107 BCL9LQ86UU0 1499 aa14.15□□□□□ -0.14
PTPRR-208ENST00000549107 BARGINQ6ZT62 677 aa14.15□□□□□ -0.14
PTPRR-208ENST00000549107 NGLY1Q96IV0 654 aa14.15□□□□□ -0.14
PTPRR-208ENST00000549107 DDX21Q9NR30 783 aaKnown RBP eCLIP14.15□□□□□ -0.14
PTPRR-208ENST00000549107 HYPKQ9NX55 129 aa14.15□□□□□ -0.14
PTPRR-208ENST00000549107 TMOD3Q9NYL9 352 aa14.15□□□□□ -0.14
PTPRR-208ENST00000549107 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.15□□□□□ -0.14
PTPRR-208ENST00000549107 ADCY9O60503 1353 aa14.14□□□□□ -0.15
PTPRR-208ENST00000549107 PDIA6Q15084 440 aa14.14□□□□□ -0.15
PTPRR-208ENST00000549107 MEIS3Q99687 375 aa14.14□□□□□ -0.15
PTPRR-208ENST00000549107 CCDC9Q9Y3X0 531 aaKnown RBP14.14□□□□□ -0.15
PTPRR-208ENST00000549107 DOT1LQ8TEK3 1739 aa14.14□□□□□ -0.15
PTPRR-208ENST00000549107 ATP10DQ9P241 1426 aa14.14□□□□□ -0.15
PTPRR-208ENST00000549107 VPS72Q15906 364 aa14.13□□□□□ -0.15
PTPRR-208ENST00000549107 DDB1Q16531 1140 aa14.13□□□□□ -0.15
PTPRR-208ENST00000549107 SMC5Q8IY18 1101 aa14.13□□□□□ -0.15
PTPRR-208ENST00000549107 FNBP4Q8N3X1 1017 aaPredicted RBP14.13□□□□□ -0.15
PTPRR-208ENST00000549107 PDZRN3Q9UPQ7 1066 aa14.13□□□□□ -0.15
PTPRR-208ENST00000549107 PI4KAP2A4QPH2 592 aa14.12□□□□□ -0.15
PTPRR-208ENST00000549107 SIRT2Q8IXJ6 389 aa14.12□□□□□ -0.15
PTPRR-208ENST00000549107 PI4KAP1Q8N8J0 262 aa14.12□□□□□ -0.15
PTPRR-208ENST00000549107 DNAAF4Q8WXU2 420 aa14.12□□□□□ -0.15
PTPRR-208ENST00000549107 USP16Q9Y5T5 823 aa14.12□□□□□ -0.15
PTPRR-208ENST00000549107 BCL9O00512 1426 aa14.11□□□□□ -0.15
PTPRR-208ENST00000549107 RGS3P49796 1198 aa14.11□□□□□ -0.15
PTPRR-208ENST00000549107 KSR2Q6VAB6 950 aa14.11□□□□□ -0.15
PTPRR-208ENST00000549107 ANKRD44Q8N8A2 993 aa14.11□□□□□ -0.15
PTPRR-208ENST00000549107 PIGBQ92521 554 aa14.11□□□□□ -0.15
PTPRR-208ENST00000549107 DDX58O95786 925 aaKnown RBP14.1□□□□□ -0.15
PTPRR-208ENST00000549107 GNAI3P08754 354 aa14.1□□□□□ -0.15
PTPRR-208ENST00000549107 MYL6BP14649 208 aa14.1□□□□□ -0.15
PTPRR-208ENST00000549107 BEND3Q5T5X7 828 aa14.1□□□□□ -0.15
PTPRR-208ENST00000549107 CEP85Q6P2H3 762 aa14.1□□□□□ -0.15
PTPRR-208ENST00000549107 RPAP2Q8IXW5 612 aaPredicted RBP14.1□□□□□ -0.15
PTPRR-208ENST00000549107 SRCIN1Q9C0H9 1055 aa14.1□□□□□ -0.15
PTPRR-208ENST00000549107 RGS17Q9UGC6 210 aaPredicted RBP14.1□□□□□ -0.15
PTPRR-208ENST00000549107 ERBB4Q15303 1308 aa14.1□□□□□ -0.15
PTPRR-208ENST00000549107 PTCD1O75127 700 aaKnown RBP14.09□□□□□ -0.15
PTPRR-208ENST00000549107 GNAI2P04899 355 aa14.09□□□□□ -0.15
PTPRR-208ENST00000549107 LRP10Q7Z4F1 713 aa14.09□□□□□ -0.15
PTPRR-208ENST00000549107 CNKSR2Q8WXI2 1034 aa14.09□□□□□ -0.15
PTPRR-208ENST00000549107 GCC1Q96CN9 775 aa14.09□□□□□ -0.15
PTPRR-208ENST00000549107 ATG3Q9NT62 314 aa14.09□□□□□ -0.15
PTPRR-208ENST00000549107 USP21Q9UK80 565 aa14.09□□□□□ -0.15
PTPRR-208ENST00000549107 ASAP1Q9ULH1 1129 aa14.09□□□□□ -0.15
PTPRR-208ENST00000549107 MAP3K2Q9Y2U5 619 aa14.09□□□□□ -0.15
PTPRR-208ENST00000549107 AIMP1Q12904 312 aaKnown RBP14.08□□□□□ -0.16
PTPRR-208ENST00000549107 MEX3CQ5U5Q3 659 aaKnown RBP14.08□□□□□ -0.16
PTPRR-208ENST00000549107 MARCH10Q8NA82 808 aaPredicted RBP14.08□□□□□ -0.16
PTPRR-208ENST00000549107 XAGE3Q8WTP9 111 aa14.08□□□□□ -0.16
PTPRR-208ENST00000549107 THSD7AQ9UPZ6 1657 aa14.07□□□□□ -0.16
PTPRR-208ENST00000549107 PIP4K2AP48426 406 aaPredicted RBP14.07□□□□□ -0.16
PTPRR-208ENST00000549107 NUCB1Q02818 461 aa14.07□□□□□ -0.16
PTPRR-208ENST00000549107 FAM98CQ17RN3 349 aaKnown RBP14.07□□□□□ -0.16
PTPRR-208ENST00000549107 COPS6Q7L5N1 327 aa14.07□□□□□ -0.16
PTPRR-208ENST00000549107 VSIG10Q8N0Z9 540 aa14.07□□□□□ -0.16
PTPRR-208ENST00000549107 USP44Q9H0E7 712 aa14.07□□□□□ -0.16
PTPRR-208ENST00000549107 RBM19Q9Y4C8 960 aaKnown RBP14.07□□□□□ -0.16
PTPRR-208ENST00000549107 ARFGEF2Q9Y6D5 1785 aa14.06□□□□□ -0.16
PTPRR-208ENST00000549107 NBPF26B4DH59 902 aa14.06□□□□□ -0.16
PTPRR-208ENST00000549107 ALDH1L1O75891 902 aa14.06□□□□□ -0.16
PTPRR-208ENST00000549107 UBTFL1P0CB47 393 aaPredicted RBP14.06□□□□□ -0.16
PTPRR-208ENST00000549107 PRIM1P49642 420 aaKnown RBP14.06□□□□□ -0.16
PTPRR-208ENST00000549107 NBPF14Q5TI25 921 aa14.06□□□□□ -0.16
PTPRR-208ENST00000549107 NBPF10Q6P3W6 841 aaKnown RBP14.06□□□□□ -0.16
PTPRR-208ENST00000549107 NBPF15Q8N660 670 aa14.06□□□□□ -0.16
PTPRR-208ENST00000549107 SYTL4Q96C24 671 aaPredicted RBP14.06□□□□□ -0.16
PTPRR-208ENST00000549107 PDE4AP27815 886 aa14.05□□□□□ -0.16
PTPRR-208ENST00000549107 RIC3Q7Z5B4 369 aa14.05□□□□□ -0.16
PTPRR-208ENST00000549107 LINS1Q8NG48 757 aa14.05□□□□□ -0.16
PTPRR-208ENST00000549107 DCTPP1Q9H773 170 aa14.05□□□□□ -0.16
PTPRR-208ENST00000549107 LRRFIP2Q9Y608 721 aaKnown RBP14.05□□□□□ -0.16
PTPRR-208ENST00000549107 TJP1Q07157 1748 aa14.04□□□□□ -0.16
PTPRR-208ENST00000549107 NUP188Q5SRE5 1749 aa14.04□□□□□ -0.16
PTPRR-208ENST00000549107 HMMRO75330 724 aa14.04□□□□□ -0.16
PTPRR-208ENST00000549107 CHD1LQ86WJ1 897 aa14.04□□□□□ -0.16
PTPRR-208ENST00000549107 DNAJC10Q8IXB1 793 aa14.04□□□□□ -0.16
PTPRR-208ENST00000549107 RBM42Q9BTD8 480 aaKnown RBP14.04□□□□□ -0.16
PTPRR-208ENST00000549107 TEX13AQ9BXU3 409 aaPredicted RBP14.04□□□□□ -0.16
PTPRR-208ENST00000549107 RNF216Q9NWF9 866 aaPredicted RBP14.04□□□□□ -0.16
PTPRR-208ENST00000549107 AFF2P51816 1311 aa14.04□□□□□ -0.16
PTPRR-208ENST00000549107 IBTKQ9P2D0 1353 aaPredicted RBP14.04□□□□□ -0.16
PTPRR-208ENST00000549107 A1BGP04217 495 aa14.03□□□□□ -0.16
PTPRR-208ENST00000549107 CWF19L2Q2TBE0 894 aaKnown RBP14.03□□□□□ -0.16
PTPRR-208ENST00000549107 ANKRD13DQ6ZTN6 518 aa14.03□□□□□ -0.16
PTPRR-208ENST00000549107 ACSBG1Q96GR2 724 aa14.03□□□□□ -0.16
PTPRR-208ENST00000549107 METTL22Q9BUU2 404 aaPredicted RBP14.03□□□□□ -0.16
PTPRR-208ENST00000549107 BACH2Q9BYV9 841 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms