RNA–Protein interactions for RNA: ENST00000548984.1

PFDN5-206, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 541 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-206ENST00000548984 MCM10Q7L590 875 aa13.54□□□□□ -0.24
PFDN5-206ENST00000548984 PLEKHF1Q96S99 279 aa13.54□□□□□ -0.24
PFDN5-206ENST00000548984 ZBTB1Q9Y2K1 713 aa13.54□□□□□ -0.24
PFDN5-206ENST00000548984 PARP3Q9Y6F1 533 aa13.54□□□□□ -0.24
PFDN5-206ENST00000548984 A0A087WZG4 1122 aa13.53□□□□□ -0.24
PFDN5-206ENST00000548984 NFE2L2Q16236 605 aa13.53□□□□□ -0.24
PFDN5-206ENST00000548984 PELP1Q8IZL8 1130 aaKnown RBP13.53□□□□□ -0.24
PFDN5-206ENST00000548984 PNISRQ8TF01 805 aaKnown RBP13.53□□□□□ -0.24
PFDN5-206ENST00000548984 SCN7AQ01118 1682 aa13.53□□□□□ -0.24
PFDN5-206ENST00000548984 SRP68Q9UHB9 627 aaKnown RBP13.52□□□□□ -0.25
PFDN5-206ENST00000548984 NARFQ9UHQ1 456 aa13.52□□□□□ -0.25
PFDN5-206ENST00000548984 PXDNLA1KZ92 1463 aa13.52□□□□□ -0.25
PFDN5-206ENST00000548984 KDM3BQ7LBC6 1761 aa13.52□□□□□ -0.25
PFDN5-206ENST00000548984 LAMB4A4D0S4 1761 aa13.51□□□□□ -0.25
PFDN5-206ENST00000548984 KIAA1551Q9HCM1 1747 aa13.51□□□□□ -0.25
PFDN5-206ENST00000548984 TGFB2P61812 414 aa13.51□□□□□ -0.25
PFDN5-206ENST00000548984 TAF7Q15545 349 aaPredicted RBP13.51□□□□□ -0.25
PFDN5-206ENST00000548984 USPL1Q5W0Q7 1092 aa13.51□□□□□ -0.25
PFDN5-206ENST00000548984 NPM2Q86SE8 214 aaKnown RBP13.51□□□□□ -0.25
PFDN5-206ENST00000548984 SNRPA1P09661 255 aaKnown RBP13.5□□□□□ -0.25
PFDN5-206ENST00000548984 CANXP27824 592 aaKnown RBP13.5□□□□□ -0.25
PFDN5-206ENST00000548984 IL6STP40189 918 aaPredicted RBP13.5□□□□□ -0.25
PFDN5-206ENST00000548984 EIF5P55010 431 aaKnown RBP13.5□□□□□ -0.25
PFDN5-206ENST00000548984 LMOD3Q0VAK6 560 aa13.5□□□□□ -0.25
PFDN5-206ENST00000548984 FKBP8Q14318 412 aa13.5□□□□□ -0.25
PFDN5-206ENST00000548984 WDR43Q15061 677 aaKnown RBP eCLIP13.5□□□□□ -0.25
PFDN5-206ENST00000548984 PRKRIP1Q9H875 184 aaPredicted RBP13.5□□□□□ -0.25
PFDN5-206ENST00000548984 ZNF316A6NFI3 1004 aaPredicted RBP13.49□□□□□ -0.25
PFDN5-206ENST00000548984 YBX3P16989 372 aaKnown RBP eCLIP13.49□□□□□ -0.25
PFDN5-206ENST00000548984 DCTN1Q14203 1278 aa13.49□□□□□ -0.25
PFDN5-206ENST00000548984 BCORQ6W2J9 1755 aa13.48□□□□□ -0.25
PFDN5-206ENST00000548984 NRXN2Q9P2S2 1712 aa13.48□□□□□ -0.25
PFDN5-206ENST00000548984 POLRMTO00411 1230 aaKnown RBP13.48□□□□□ -0.25
PFDN5-206ENST00000548984 KCNQ3O43525 872 aa13.48□□□□□ -0.25
PFDN5-206ENST00000548984 TM4SF1P30408 202 aa13.48□□□□□ -0.25
PFDN5-206ENST00000548984 DDR1Q08345 913 aa13.48□□□□□ -0.25
PFDN5-206ENST00000548984 BRCA1P38398 1863 aaKnown RBP13.46□□□□□ -0.25
PFDN5-206ENST00000548984 N4BP2Q86UW6 1770 aaPredicted RBP13.46□□□□□ -0.25
PFDN5-206ENST00000548984 RGL2O15211 777 aa13.46□□□□□ -0.25
PFDN5-206ENST00000548984 BABAM1Q9NWV8 329 aa13.46□□□□□ -0.25
PFDN5-206ENST00000548984 A1BGP04217 495 aa13.45□□□□□ -0.26
PFDN5-206ENST00000548984 TMPOP42166 694 aaKnown RBP13.45□□□□□ -0.26
PFDN5-206ENST00000548984 RIPK4P57078 832 aa13.45□□□□□ -0.26
PFDN5-206ENST00000548984 NFIXQ14938 502 aa13.45□□□□□ -0.26
PFDN5-206ENST00000548984 RUNDC1Q96C34 613 aa13.45□□□□□ -0.26
PFDN5-206ENST00000548984 BCL2L12Q9HB09 334 aa13.45□□□□□ -0.26
PFDN5-206ENST00000548984 ZNF330Q9Y3S2 320 aaPredicted RBP13.45□□□□□ -0.26
PFDN5-206ENST00000548984 USP16Q9Y5T5 823 aa13.45□□□□□ -0.26
PFDN5-206ENST00000548984 AFDNP55196 1824 aaKnown RBP13.45□□□□□ -0.26
PFDN5-206ENST00000548984 CARMIL3Q8ND23 1372 aa13.45□□□□□ -0.26
PFDN5-206ENST00000548984 ARFGEF1Q9Y6D6 1849 aa13.43□□□□□ -0.26
PFDN5-206ENST00000548984 DLEC1Q9Y238 1755 aa13.43□□□□□ -0.26
PFDN5-206ENST00000548984 CAMTA2O94983 1202 aa13.43□□□□□ -0.26
PFDN5-206ENST00000548984 DPEP1P16444 411 aa13.43□□□□□ -0.26
PFDN5-206ENST00000548984 EIF4A1P60842 406 aaKnown RBP13.43□□□□□ -0.26
PFDN5-206ENST00000548984 DZIP3Q86Y13 1208 aaKnown RBP13.43□□□□□ -0.26
PFDN5-206ENST00000548984 ZNF784Q8NCA9 323 aaPredicted RBP13.43□□□□□ -0.26
PFDN5-206ENST00000548984 THUMPD2Q9BTF0 503 aaKnown RBP13.43□□□□□ -0.26
PFDN5-206ENST00000548984 ZNF652Q9Y2D9 606 aa13.43□□□□□ -0.26
PFDN5-206ENST00000548984 ERBB4Q15303 1308 aa13.42□□□□□ -0.26
PFDN5-206ENST00000548984 A0A0G2JLW4 131 aa13.42□□□□□ -0.26
PFDN5-206ENST00000548984 PRAMEF22A3QJZ6 481 aa13.42□□□□□ -0.26
PFDN5-206ENST00000548984 SERPINB2P05120 415 aa13.42□□□□□ -0.26
PFDN5-206ENST00000548984 CLEC4GQ6UXB4 293 aa13.42□□□□□ -0.26
PFDN5-206ENST00000548984 TSPYL4Q9UJ04 414 aa13.42□□□□□ -0.26
PFDN5-206ENST00000548984 PDZRN3Q9UPQ7 1066 aa13.42□□□□□ -0.26
PFDN5-206ENST00000548984 TBC1D2BQ9UPU7 963 aa13.42□□□□□ -0.26
PFDN5-206ENST00000548984 GIGYF1O75420 1035 aaPredicted RBP13.41□□□□□ -0.26
PFDN5-206ENST00000548984 CCDC146Q8IYE0 955 aa13.41□□□□□ -0.26
PFDN5-206ENST00000548984 MIS18AQ9NYP9 233 aa13.41□□□□□ -0.26
PFDN5-206ENST00000548984 PIM2Q9P1W9 311 aa13.41□□□□□ -0.26
PFDN5-206ENST00000548984 ADAMTS8Q9UP79 889 aa13.41□□□□□ -0.26
PFDN5-206ENST00000548984 BCS1LQ9Y276 419 aa13.41□□□□□ -0.26
PFDN5-206ENST00000548984 ADCY9O60503 1353 aa13.41□□□□□ -0.26
PFDN5-206ENST00000548984 UTRNP46939 3433 aa13.4□□□□□ -0.26
PFDN5-206ENST00000548984 TBC1D9BQ66K14 1250 aa13.4□□□□□ -0.26
PFDN5-206ENST00000548984 WWC3Q9ULE0 1092 aa13.4□□□□□ -0.26
PFDN5-206ENST00000548984 NBPF26B4DH59 902 aa13.39□□□□□ -0.27
PFDN5-206ENST00000548984 KCNA3P22001 575 aa13.39□□□□□ -0.27
PFDN5-206ENST00000548984 DALRD3Q5D0E6 543 aaKnown RBP13.39□□□□□ -0.27
PFDN5-206ENST00000548984 NBPF10Q6P3W6 841 aaKnown RBP13.39□□□□□ -0.27
PFDN5-206ENST00000548984 BICDL1Q6ZP65 573 aa13.39□□□□□ -0.27
PFDN5-206ENST00000548984 NBPF15Q8N660 670 aa13.39□□□□□ -0.27
PFDN5-206ENST00000548984 SETDB2Q96T68 719 aa13.39□□□□□ -0.27
PFDN5-206ENST00000548984 GOLGB1Q14789 3259 aaKnown RBP13.38□□□□□ -0.27
PFDN5-206ENST00000548984 PIP4K2AP48426 406 aaPredicted RBP13.38□□□□□ -0.27
PFDN5-206ENST00000548984 CNBD1Q8NA66 436 aa13.38□□□□□ -0.27
PFDN5-206ENST00000548984 RRP7AQ9Y3A4 280 aaKnown RBP13.38□□□□□ -0.27
PFDN5-206ENST00000548984 ATP10DQ9P241 1426 aa13.38□□□□□ -0.27
PFDN5-206ENST00000548984 NPHP1O15259 732 aa13.37□□□□□ -0.27
PFDN5-206ENST00000548984 CHRNA5P30532 468 aa13.37□□□□□ -0.27
PFDN5-206ENST00000548984 PDE6BP35913 854 aa13.37□□□□□ -0.27
PFDN5-206ENST00000548984 ST5P78524 1137 aa13.37□□□□□ -0.27
PFDN5-206ENST00000548984 CALD1Q05682 793 aaKnown RBP13.37□□□□□ -0.27
PFDN5-206ENST00000548984 NEUROD2Q15784 382 aa13.37□□□□□ -0.27
PFDN5-206ENST00000548984 PRR5LQ6MZQ0 368 aa13.37□□□□□ -0.27
PFDN5-206ENST00000548984 BRIP1Q9BX63 1249 aa13.37□□□□□ -0.27
PFDN5-206ENST00000548984 TRIM35Q9UPQ4 493 aa13.37□□□□□ -0.27
PFDN5-206ENST00000548984 ANKRD31Q8N7Z5 1873 aa13.37□□□□□ -0.27
PFDN5-206ENST00000548984 ERVV-1B6SEH8 477 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms