RNA–Protein interactions for RNA: ENST00000548961.5

RACGAP1-216, Transcript of Rac GTPase activating protein 1, humanhuman

TSL 3 BASIC

Gene RACGAP1, Length 387 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACGAP1-216ENST00000548961 CALD1Q05682 793 aaKnown RBP8.83□□□□□ -1
RACGAP1-216ENST00000548961 R3HDM1Q15032 1099 aaKnown RBP8.83□□□□□ -1
RACGAP1-216ENST00000548961 WWC1Q8IX03 1113 aa8.83□□□□□ -1
RACGAP1-216ENST00000548961 FMNL2Q96PY5 1086 aa8.83□□□□□ -1
RACGAP1-216ENST00000548961 STK32BQ9NY57 414 aa8.83□□□□□ -1
RACGAP1-216ENST00000548961 RGPD3A6NKT7 1758 aaPredicted RBP8.83□□□□□ -1
RACGAP1-216ENST00000548961 RGPD4Q7Z3J3 1758 aa8.83□□□□□ -1
RACGAP1-216ENST00000548961 NUP188Q5SRE5 1749 aa8.83□□□□□ -1
RACGAP1-216ENST00000548961 RREB1Q92766 1687 aa8.82□□□□□ -1
RACGAP1-216ENST00000548961 SMIM5Q71RC9 77 aa8.82□□□□□ -1
RACGAP1-216ENST00000548961 DNAJC10Q8IXB1 793 aa8.82□□□□□ -1
RACGAP1-216ENST00000548961 LINC00116Q8NCU8 138 aa8.82□□□□□ -1
RACGAP1-216ENST00000548961 ANO8Q9HCE9 1232 aaPredicted RBP8.82□□□□□ -1
RACGAP1-216ENST00000548961 TFCP2L1Q9NZI6 479 aa8.82□□□□□ -1
RACGAP1-216ENST00000548961 PRAMEF22A3QJZ6 481 aa8.81□□□□□ -1
RACGAP1-216ENST00000548961 CHL1O00533 1208 aa8.81□□□□□ -1
RACGAP1-216ENST00000548961 PHF14O94880 888 aa8.81□□□□□ -1
RACGAP1-216ENST00000548961 EIF4A1P60842 406 aaKnown RBP8.81□□□□□ -1
RACGAP1-216ENST00000548961 GNAI1P63096 354 aa8.81□□□□□ -1
RACGAP1-216ENST00000548961 HNRNPUQ00839 825 aaKnown RBP eCLIP8.81□□□□□ -1
RACGAP1-216ENST00000548961 SLC15A2Q16348 729 aa8.81□□□□□ -1
RACGAP1-216ENST00000548961 ZNF827Q17R98 1081 aa8.81□□□□□ -1
RACGAP1-216ENST00000548961 CCDC27Q2M243 656 aa8.81□□□□□ -1
RACGAP1-216ENST00000548961 TSR2Q969E8 191 aaKnown RBP8.81□□□□□ -1
RACGAP1-216ENST00000548961 AK7Q96M32 723 aa8.81□□□□□ -1
RACGAP1-216ENST00000548961 CFAP44Q96MT7 982 aa8.81□□□□□ -1
RACGAP1-216ENST00000548961 KCPQ6ZWJ8 1503 aa8.8□□□□□ -1
RACGAP1-216ENST00000548961 PAPPAQ13219 1627 aa8.8□□□□□ -1
RACGAP1-216ENST00000548961 TAF1LQ8IZX4 1826 aa8.8□□□□□ -1
RACGAP1-216ENST00000548961 ELL2O00472 640 aaPredicted RBP8.8□□□□□ -1
RACGAP1-216ENST00000548961 GNPATO15228 680 aa8.8□□□□□ -1
RACGAP1-216ENST00000548961 STARD3NLO95772 234 aa8.8□□□□□ -1
RACGAP1-216ENST00000548961 SNRPA1P09661 255 aaKnown RBP8.8□□□□□ -1
RACGAP1-216ENST00000548961 CYP19A1P11511 503 aaPredicted RBP8.8□□□□□ -1
RACGAP1-216ENST00000548961 HMGB2P26583 209 aaKnown RBP8.8□□□□□ -1
RACGAP1-216ENST00000548961 CRKLP46109 303 aaKnown RBP8.8□□□□□ -1
RACGAP1-216ENST00000548961 KRT24Q2M2I5 525 aa8.8□□□□□ -1
RACGAP1-216ENST00000548961 VSIG10Q8N0Z9 540 aa8.8□□□□□ -1
RACGAP1-216ENST00000548961 ZNF579Q8NAF0 562 aaKnown RBP8.8□□□□□ -1
RACGAP1-216ENST00000548961 NECTIN2Q92692 538 aa8.8□□□□□ -1
RACGAP1-216ENST00000548961 TEX13AQ9BXU3 409 aaPredicted RBP8.8□□□□□ -1
RACGAP1-216ENST00000548961 MBIPQ9NS73 344 aa8.8□□□□□ -1
RACGAP1-216ENST00000548961 IFT57Q9NWB7 429 aa8.8□□□□□ -1
RACGAP1-216ENST00000548961 BABAM1Q9NWV8 329 aa8.8□□□□□ -1
RACGAP1-216ENST00000548961 USP16Q9Y5T5 823 aa8.8□□□□□ -1
RACGAP1-216ENST00000548961 HEG1Q9ULI3 1381 aa8.8□□□□□ -1
RACGAP1-216ENST00000548961 C5P01031 1676 aa8.8□□□□□ -1
RACGAP1-216ENST00000548961 KDM3BQ7LBC6 1761 aa8.79□□□□□ -1
RACGAP1-216ENST00000548961 UBR2Q8IWV8 1755 aa8.79□□□□□ -1
RACGAP1-216ENST00000548961 A1BGP04217 495 aa8.79□□□□□ -1
RACGAP1-216ENST00000548961 ZNF853P0CG23 659 aa8.79□□□□□ -1
RACGAP1-216ENST00000548961 EIF2S2P20042 333 aaKnown RBP8.79□□□□□ -1
RACGAP1-216ENST00000548961 CANXP27824 592 aaKnown RBP8.79□□□□□ -1
RACGAP1-216ENST00000548961 PIP4K2AP48426 406 aaPredicted RBP8.79□□□□□ -1
RACGAP1-216ENST00000548961 WDR63Q8IWG1 891 aa8.79□□□□□ -1
RACGAP1-216ENST00000548961 NGEFQ8N5V2 710 aa8.79□□□□□ -1
RACGAP1-216ENST00000548961 ARXQ96QS3 562 aa8.79□□□□□ -1
RACGAP1-216ENST00000548961 PDGFDQ9GZP0 370 aaPredicted RBP8.79□□□□□ -1
RACGAP1-216ENST00000548961 CCDC87Q9NVE4 849 aa8.79□□□□□ -1
RACGAP1-216ENST00000548961 ZNF330Q9Y3S2 320 aaPredicted RBP8.79□□□□□ -1
RACGAP1-216ENST00000548961 C4BP0C0L5 1744 aa8.79□□□□□ -1
RACGAP1-216ENST00000548961 TJP1Q07157 1748 aa8.79□□□□□ -1
RACGAP1-216ENST00000548961 GIGYF1O75420 1035 aaPredicted RBP8.78□□□□□ -1
RACGAP1-216ENST00000548961 INTS5Q6P9B9 1019 aaKnown RBP8.78□□□□□ -1
RACGAP1-216ENST00000548961 RTCBQ9Y3I0 505 aaKnown RBP8.78□□□□□ -1
RACGAP1-216ENST00000548961 ZNF831Q5JPB2 1677 aa8.78□□□□□ -1
RACGAP1-216ENST00000548961 IL16Q14005 1332 aa8.78□□□□□ -1
RACGAP1-216ENST00000548961 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.77□□□□□ -1.01
RACGAP1-216ENST00000548961 RPS6KA4O75676 772 aa8.77□□□□□ -1.01
RACGAP1-216ENST00000548961 GOLGA2Q08379 1002 aa8.77□□□□□ -1.01
RACGAP1-216ENST00000548961 TRAPPC3LQ5T215 181 aa8.77□□□□□ -1.01
RACGAP1-216ENST00000548961 RC3H1Q5TC82 1133 aaKnown RBP8.77□□□□□ -1.01
RACGAP1-216ENST00000548961 NPM2Q86SE8 214 aaKnown RBP8.77□□□□□ -1.01
RACGAP1-216ENST00000548961 AMIGO3Q86WK7 504 aa8.77□□□□□ -1.01
RACGAP1-216ENST00000548961 COL23A1Q86Y22 540 aaPredicted RBP8.77□□□□□ -1.01
RACGAP1-216ENST00000548961 C8orf58Q8NAV2 365 aa8.77□□□□□ -1.01
RACGAP1-216ENST00000548961 CDCA7LQ96GN5 454 aa8.77□□□□□ -1.01
RACGAP1-216ENST00000548961 MYH14Q7Z406 1995 aaKnown RBP8.77□□□□□ -1.01
RACGAP1-216ENST00000548961 CNTNAP4Q9C0A0 1308 aa8.77□□□□□ -1.01
RACGAP1-216ENST00000548961 COL5A3P25940 1745 aaPredicted RBP8.77□□□□□ -1.01
RACGAP1-216ENST00000548961 TUBGCP6Q96RT7 1819 aa8.76□□□□□ -1.01
RACGAP1-216ENST00000548961 MYL6BP14649 208 aa8.76□□□□□ -1.01
RACGAP1-216ENST00000548961 RFC4P35249 363 aa8.76□□□□□ -1.01
RACGAP1-216ENST00000548961 EXOSC9Q06265 439 aaKnown RBP8.76□□□□□ -1.01
RACGAP1-216ENST00000548961 DUSP27Q5VZP5 1158 aa8.76□□□□□ -1.01
RACGAP1-216ENST00000548961 TSPYL6Q8N831 410 aa8.76□□□□□ -1.01
RACGAP1-216ENST00000548961 ARHGEF1Q92888 912 aaKnown RBP8.76□□□□□ -1.01
RACGAP1-216ENST00000548961 YTHDC1Q96MU7 727 aaKnown RBP8.76□□□□□ -1.01
RACGAP1-216ENST00000548961 MYH16Q9H6N6 1097 aa8.76□□□□□ -1.01
RACGAP1-216ENST00000548961 ZBTB1Q9Y2K1 713 aa8.76□□□□□ -1.01
RACGAP1-216ENST00000548961 PNPLA7Q6ZV29 1317 aa8.76□□□□□ -1.01
RACGAP1-216ENST00000548961 ZNF521Q96K83 1311 aa8.76□□□□□ -1.01
RACGAP1-216ENST00000548961 FANCIQ9NVI1 1328 aa8.76□□□□□ -1.01
RACGAP1-216ENST00000548961 TCERG1O14776 1098 aaKnown RBP8.75□□□□□ -1.01
RACGAP1-216ENST00000548961 ZBTB7AO95365 584 aa8.75□□□□□ -1.01
RACGAP1-216ENST00000548961 MSL1Q68DK7 614 aa8.75□□□□□ -1.01
RACGAP1-216ENST00000548961 FLAD1Q8NFF5 587 aa8.75□□□□□ -1.01
RACGAP1-216ENST00000548961 DCBLD2Q96PD2 775 aa8.75□□□□□ -1.01
RACGAP1-216ENST00000548961 TBC1D2BQ9UPU7 963 aa8.75□□□□□ -1.01
RACGAP1-216ENST00000548961 UBR3Q6ZT12 1888 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms