RNA–Protein interactions for RNA: ENST00000548939.1

CNOT2-216, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 2

Gene CNOT2, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-216ENST00000548939 ARSJQ5FYB0 599 aaPredicted RBP9.35□□□□□ -0.91
CNOT2-216ENST00000548939 POM121Q96HA1 1249 aa9.35□□□□□ -0.91
CNOT2-216ENST00000548939 RRAGCQ9HB90 399 aa9.35□□□□□ -0.91
CNOT2-216ENST00000548939 BACH1O14867 736 aa9.34□□□□□ -0.91
CNOT2-216ENST00000548939 ATXN7O15265 892 aaPredicted RBP9.34□□□□□ -0.91
CNOT2-216ENST00000548939 LZTS3O60299 673 aaPredicted RBP9.34□□□□□ -0.91
CNOT2-216ENST00000548939 TATP17735 454 aaPredicted RBP9.34□□□□□ -0.91
CNOT2-216ENST00000548939 GTF2IP78347 998 aa9.34□□□□□ -0.91
CNOT2-216ENST00000548939 ZNF295-AS1Q8N0V1 137 aa9.34□□□□□ -0.91
CNOT2-216ENST00000548939 NFATC2IPQ8NCF5 419 aa9.34□□□□□ -0.91
CNOT2-216ENST00000548939 CABP1Q9NZU7 370 aa9.34□□□□□ -0.91
CNOT2-216ENST00000548939 GGA1Q9UJY5 639 aa9.34□□□□□ -0.91
CNOT2-216ENST00000548939 MKL2Q9ULH7 1088 aa9.34□□□□□ -0.91
CNOT2-216ENST00000548939 IQSEC3Q9UPP2 1182 aaPredicted RBP9.34□□□□□ -0.91
CNOT2-216ENST00000548939 USP3Q9Y6I4 520 aa9.34□□□□□ -0.91
CNOT2-216ENST00000548939 LOC100996750A0A140TA64 210 aa9.33□□□□□ -0.92
CNOT2-216ENST00000548939 A0A1W2PNR3 127 aa9.33□□□□□ -0.92
CNOT2-216ENST00000548939 RAD21O60216 631 aa9.33□□□□□ -0.92
CNOT2-216ENST00000548939 AMPD1P23109 780 aa9.33□□□□□ -0.92
CNOT2-216ENST00000548939 PSME1Q06323 249 aa9.33□□□□□ -0.92
CNOT2-216ENST00000548939 SLCO4C1Q6ZQN7 724 aa9.33□□□□□ -0.92
CNOT2-216ENST00000548939 KRTAP4-6Q9BYQ5 205 aa9.33□□□□□ -0.92
CNOT2-216ENST00000548939 ZDHHC3Q9NYG2 299 aa9.33□□□□□ -0.92
CNOT2-216ENST00000548939 MSTNO14793 375 aa9.32□□□□□ -0.92
CNOT2-216ENST00000548939 NCOA4Q13772 614 aa9.32□□□□□ -0.92
CNOT2-216ENST00000548939 DCDC2BA2VCK2 349 aa9.31□□□□□ -0.92
CNOT2-216ENST00000548939 ARAFP10398 606 aa9.31□□□□□ -0.92
CNOT2-216ENST00000548939 GJA3Q9Y6H8 435 aa9.31□□□□□ -0.92
CNOT2-216ENST00000548939 USP17L5A8MUK1 530 aa9.3□□□□□ -0.92
CNOT2-216ENST00000548939 MAPTP10636 758 aaKnown RBP9.3□□□□□ -0.92
CNOT2-216ENST00000548939 TNP2Q05952 138 aa9.3□□□□□ -0.92
CNOT2-216ENST00000548939 DEPDC4Q8N2C3 294 aa9.3□□□□□ -0.92
CNOT2-216ENST00000548939 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.3□□□□□ -0.92
CNOT2-216ENST00000548939 ZIC5Q96T25 663 aa9.3□□□□□ -0.92
CNOT2-216ENST00000548939 ZNF358Q9NW07 568 aa9.3□□□□□ -0.92
CNOT2-216ENST00000548939 PARP3Q9Y6F1 533 aa9.3□□□□□ -0.92
CNOT2-216ENST00000548939 NEURL1BA8MQ27 555 aa9.29□□□□□ -0.92
CNOT2-216ENST00000548939 KHNYNO15037 678 aaKnown RBP9.29□□□□□ -0.92
CNOT2-216ENST00000548939 ITGB2P05107 769 aa9.29□□□□□ -0.92
CNOT2-216ENST00000548939 UBTFP17480 764 aaKnown RBP9.29□□□□□ -0.92
CNOT2-216ENST00000548939 CD33P20138 364 aa9.29□□□□□ -0.92
CNOT2-216ENST00000548939 BICDL1Q6ZP65 573 aa9.29□□□□□ -0.92
CNOT2-216ENST00000548939 SPOCK3Q9BQ16 436 aa9.29□□□□□ -0.92
CNOT2-216ENST00000548939 SCHIP1Q9P0W5 487 aaPredicted RBP9.29□□□□□ -0.92
CNOT2-216ENST00000548939 EPXP11678 715 aa9.28□□□□□ -0.92
CNOT2-216ENST00000548939 FLIIQ13045 1269 aa9.28□□□□□ -0.92
CNOT2-216ENST00000548939 BTBD6Q96KE9 485 aa9.28□□□□□ -0.92
CNOT2-216ENST00000548939 POM121CA8CG34 1229 aa9.27□□□□□ -0.93
CNOT2-216ENST00000548939 FAM182BQ5T319 152 aa9.27□□□□□ -0.93
CNOT2-216ENST00000548939 TRIM50Q86XT4 487 aa9.27□□□□□ -0.93
CNOT2-216ENST00000548939 FAM157BP0CG42 384 aa9.26□□□□□ -0.93
CNOT2-216ENST00000548939 HOXB4P17483 251 aaPredicted RBP9.26□□□□□ -0.93
CNOT2-216ENST00000548939 ADH6P28332 368 aa9.26□□□□□ -0.93
CNOT2-216ENST00000548939 TXLNAP40222 546 aa9.26□□□□□ -0.93
CNOT2-216ENST00000548939 LINC00114Q6XXX2 140 aa9.26□□□□□ -0.93
CNOT2-216ENST00000548939 ALYREFQ86V81 257 aaKnown RBP9.26□□□□□ -0.93
CNOT2-216ENST00000548939 ZDHHC1Q8WTX9 485 aa9.26□□□□□ -0.93
CNOT2-216ENST00000548939 L3MBTL2Q969R5 705 aa9.26□□□□□ -0.93
CNOT2-216ENST00000548939 HCN2Q9UL51 889 aa9.26□□□□□ -0.93
CNOT2-216ENST00000548939 KRBA1A5PL33 1030 aa9.25□□□□□ -0.93
CNOT2-216ENST00000548939 PIK3R2O00459 728 aa9.25□□□□□ -0.93
CNOT2-216ENST00000548939 COL8A1P27658 744 aa9.25□□□□□ -0.93
CNOT2-216ENST00000548939 TEAD4Q15561 434 aa9.25□□□□□ -0.93
CNOT2-216ENST00000548939 ADAMTS19Q8TE59 1207 aa9.25□□□□□ -0.93
CNOT2-216ENST00000548939 AVENQ9NQS1 362 aaPredicted RBP9.25□□□□□ -0.93
CNOT2-216ENST00000548939 GNB5O14775 395 aa9.24□□□□□ -0.93
CNOT2-216ENST00000548939 PROCP04070 461 aa9.24□□□□□ -0.93
CNOT2-216ENST00000548939 NOS2P35228 1153 aa9.24□□□□□ -0.93
CNOT2-216ENST00000548939 EPHA4P54764 986 aa9.24□□□□□ -0.93
CNOT2-216ENST00000548939 GRIN2CQ14957 1233 aa9.24□□□□□ -0.93
CNOT2-216ENST00000548939 TBCELQ5QJ74 424 aa9.24□□□□□ -0.93
CNOT2-216ENST00000548939 SAMD5Q5TGI4 173 aa9.24□□□□□ -0.93
CNOT2-216ENST00000548939 SLC9A9Q8IVB4 645 aa9.24□□□□□ -0.93
CNOT2-216ENST00000548939 TNS4Q8IZW8 715 aa9.24□□□□□ -0.93
CNOT2-216ENST00000548939 MARK1Q9P0L2 795 aa9.24□□□□□ -0.93
CNOT2-216ENST00000548939 PRR12Q9ULL5 1215 aa9.24□□□□□ -0.93
CNOT2-216ENST00000548939 ZNF232Q9UNY5 417 aa9.24□□□□□ -0.93
CNOT2-216ENST00000548939 USP17L3A6NCW0 530 aa9.23□□□□□ -0.93
CNOT2-216ENST00000548939 USP17L4A6NCW7 530 aa9.23□□□□□ -0.93
CNOT2-216ENST00000548939 ATP1A2P50993 1020 aa9.23□□□□□ -0.93
CNOT2-216ENST00000548939 HDGFL1Q5TGJ6 251 aa9.23□□□□□ -0.93
CNOT2-216ENST00000548939 USP17L2Q6R6M4 530 aa9.23□□□□□ -0.93
CNOT2-216ENST00000548939 CHSY3Q70JA7 882 aa9.23□□□□□ -0.93
CNOT2-216ENST00000548939 USP17L1Q7RTZ2 530 aa9.23□□□□□ -0.93
CNOT2-216ENST00000548939 PLEKHM2Q8IWE5 1019 aa9.23□□□□□ -0.93
CNOT2-216ENST00000548939 TPCN2Q8NHX9 752 aa9.23□□□□□ -0.93
CNOT2-216ENST00000548939 SUV39H2Q9H5I1 410 aa9.23□□□□□ -0.93
CNOT2-216ENST00000548939 KLF15Q9UIH9 416 aa9.23□□□□□ -0.93
CNOT2-216ENST00000548939 DGKGP49619 791 aa9.22□□□□□ -0.93
CNOT2-216ENST00000548939 PCBP4P57723 403 aaKnown RBP9.22□□□□□ -0.93
CNOT2-216ENST00000548939 LAMC2Q13753 1193 aa9.22□□□□□ -0.93
CNOT2-216ENST00000548939 FCHSD1Q86WN1 690 aa9.22□□□□□ -0.93
CNOT2-216ENST00000548939 NEUROD4Q9HD90 331 aa9.22□□□□□ -0.93
CNOT2-216ENST00000548939 STRN4Q9NRL3 753 aa9.22□□□□□ -0.93
CNOT2-216ENST00000548939 SERTM1A2A2V5 107 aa9.21□□□□□ -0.94
CNOT2-216ENST00000548939 EML1O00423 815 aa9.21□□□□□ -0.94
CNOT2-216ENST00000548939 ZBTB7BO15156 539 aaPredicted RBP9.21□□□□□ -0.94
CNOT2-216ENST00000548939 EFSO43281 561 aa9.21□□□□□ -0.94
CNOT2-216ENST00000548939 ZNF468Q5VIY5 522 aaPredicted RBP9.21□□□□□ -0.94
CNOT2-216ENST00000548939 CCDC102BQ68D86 513 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms