RNA–Protein interactions for RNA: ENST00000548860.5

CACNB3-209, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2

Gene CACNB3, Length 4,029 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-209ENST00000548860 PHF8Q9UPP1 1060 aa16.99■□□□□ 0.31
CACNB3-209ENST00000548860 WDR33Q9C0J8 1336 aaKnown RBP16.98■□□□□ 0.31
CACNB3-209ENST00000548860 DDX17Q92841 729 aaKnown RBP16.98■□□□□ 0.31
CACNB3-209ENST00000548860 MYD88Q99836 296 aa16.98■□□□□ 0.31
CACNB3-209ENST00000548860 MROH1Q8NDA8 1641 aa16.98■□□□□ 0.31
CACNB3-209ENST00000548860 MYOM1P52179 1685 aa16.98■□□□□ 0.31
CACNB3-209ENST00000548860 CHAF1AQ13111 956 aaPredicted RBP16.98■□□□□ 0.31
CACNB3-209ENST00000548860 DNM1Q05193 864 aaKnown RBP16.98■□□□□ 0.31
CACNB3-209ENST00000548860 GNL2Q13823 731 aaKnown RBP16.98■□□□□ 0.31
CACNB3-209ENST00000548860 SF3A1Q15459 793 aaKnown RBP16.98■□□□□ 0.31
CACNB3-209ENST00000548860 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.98■□□□□ 0.31
CACNB3-209ENST00000548860 GPT2Q8TD30 523 aa16.97■□□□□ 0.31
CACNB3-209ENST00000548860 DDX58O95786 925 aaKnown RBP16.97■□□□□ 0.31
CACNB3-209ENST00000548860 ZNF853P0CG23 659 aa16.97■□□□□ 0.31
CACNB3-209ENST00000548860 AK2P54819 239 aa16.97■□□□□ 0.31
CACNB3-209ENST00000548860 THEMISQ8N1K5 641 aaPredicted RBP16.97■□□□□ 0.31
CACNB3-209ENST00000548860 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.97■□□□□ 0.31
CACNB3-209ENST00000548860 FSD2A1L4K1 749 aa16.97■□□□□ 0.31
CACNB3-209ENST00000548860 GJB2P29033 226 aa16.97■□□□□ 0.31
CACNB3-209ENST00000548860 APPP05067 770 aa16.96■□□□□ 0.31
CACNB3-209ENST00000548860 WASHC4Q2M389 1173 aa16.96■□□□□ 0.31
CACNB3-209ENST00000548860 USP44Q9H0E7 712 aa16.96■□□□□ 0.31
CACNB3-209ENST00000548860 ABCA9Q8IUA7 1624 aa16.96■□□□□ 0.31
CACNB3-209ENST00000548860 TULP4Q9NRJ4 1543 aa16.96■□□□□ 0.31
CACNB3-209ENST00000548860 KAT6BQ8WYB5 2073 aa16.96■□□□□ 0.31
CACNB3-209ENST00000548860 ATP6V1DQ9Y5K8 247 aa16.96■□□□□ 0.31
CACNB3-209ENST00000548860 PROSER2Q86WR7 435 aaPredicted RBP16.95■□□□□ 0.3
CACNB3-209ENST00000548860 SNRKQ9NRH2 765 aa16.95■□□□□ 0.3
CACNB3-209ENST00000548860 CREBRFQ8IUR6 639 aa16.95■□□□□ 0.3
CACNB3-209ENST00000548860 STRN4Q9NRL3 753 aa16.95■□□□□ 0.3
CACNB3-209ENST00000548860 HOXC9P31274 260 aa16.95■□□□□ 0.3
CACNB3-209ENST00000548860 MCM2P49736 904 aa16.95■□□□□ 0.3
CACNB3-209ENST00000548860 CHST3Q7LGC8 479 aa16.95■□□□□ 0.3
CACNB3-209ENST00000548860 TRIM5Q9C035 493 aa16.95■□□□□ 0.3
CACNB3-209ENST00000548860 SETD1BQ9UPS6 1966 aaKnown RBP16.95■□□□□ 0.3
CACNB3-209ENST00000548860 CCT2P78371 535 aaKnown RBP16.94■□□□□ 0.3
CACNB3-209ENST00000548860 FKBP4Q02790 459 aaKnown RBP eCLIP16.94■□□□□ 0.3
CACNB3-209ENST00000548860 HSP90AB4PQ58FF6 505 aa16.94■□□□□ 0.3
CACNB3-209ENST00000548860 NBPF6Q5VWK0 638 aa16.94■□□□□ 0.3
CACNB3-209ENST00000548860 BLOC1S2Q6QNY1 142 aa16.94■□□□□ 0.3
CACNB3-209ENST00000548860 NBPF4Q96M43 638 aa16.94■□□□□ 0.3
CACNB3-209ENST00000548860 DDX46Q7L014 1031 aaKnown RBP16.94■□□□□ 0.3
CACNB3-209ENST00000548860 FAM227BQ96M60 508 aa16.94■□□□□ 0.3
CACNB3-209ENST00000548860 CCDC39Q9UFE4 941 aa16.94■□□□□ 0.3
CACNB3-209ENST00000548860 STX6O43752 255 aa16.93■□□□□ 0.3
CACNB3-209ENST00000548860 UBE3BQ7Z3V4 1068 aa16.93■□□□□ 0.3
CACNB3-209ENST00000548860 BECN2A8MW95 431 aa16.93■□□□□ 0.3
CACNB3-209ENST00000548860 ATP2B1P20020 1258 aa16.93■□□□□ 0.3
CACNB3-209ENST00000548860 TNRQ92752 1358 aa16.93■□□□□ 0.3
CACNB3-209ENST00000548860 SOS1Q07889 1333 aaPredicted RBP16.93■□□□□ 0.3
CACNB3-209ENST00000548860 ORAI2Q96SN7 254 aa16.93■□□□□ 0.3
CACNB3-209ENST00000548860 RASEFQ8IZ41 740 aa16.93■□□□□ 0.3
CACNB3-209ENST00000548860 LIMCH1Q9UPQ0 1083 aa16.93■□□□□ 0.3
CACNB3-209ENST00000548860 ROBO2Q9HCK4 1378 aa16.92■□□□□ 0.3
CACNB3-209ENST00000548860 GLRX3O76003 335 aaKnown RBP16.92■□□□□ 0.3
CACNB3-209ENST00000548860 PROSER3Q2NL68 480 aa16.92■□□□□ 0.3
CACNB3-209ENST00000548860 HSP90AB3PQ58FF7 597 aa16.92■□□□□ 0.3
CACNB3-209ENST00000548860 ZFYVE9O95405 1425 aa16.92■□□□□ 0.3
CACNB3-209ENST00000548860 EDC4Q6P2E9 1401 aaKnown RBP16.92■□□□□ 0.3
CACNB3-209ENST00000548860 ABCC3O15438 1527 aa16.92■□□□□ 0.3
CACNB3-209ENST00000548860 ADCY5O95622 1261 aa16.91■□□□□ 0.3
CACNB3-209ENST00000548860 RNF20Q5VTR2 975 aa16.91■□□□□ 0.3
CACNB3-209ENST00000548860 LRSAM1Q6UWE0 723 aa16.91■□□□□ 0.3
CACNB3-209ENST00000548860 CCDC129Q6ZRS4 1044 aa16.91■□□□□ 0.3
CACNB3-209ENST00000548860 ECHDC1Q9NTX5 307 aa16.91■□□□□ 0.3
CACNB3-209ENST00000548860 GOLGA6L19H0YKK7 550 aa16.91■□□□□ 0.3
CACNB3-209ENST00000548860 ZBTB9Q96C00 473 aa16.91■□□□□ 0.3
CACNB3-209ENST00000548860 ZBTB3Q9H5J0 574 aa16.9■□□□□ 0.3
CACNB3-209ENST00000548860 SYT1P21579 422 aa16.9■□□□□ 0.3
CACNB3-209ENST00000548860 HAND2P61296 217 aa16.9■□□□□ 0.3
CACNB3-209ENST00000548860 COPS6Q7L5N1 327 aa16.9■□□□□ 0.3
CACNB3-209ENST00000548860 DEPDC5O75140 1603 aa16.9■□□□□ 0.3
CACNB3-209ENST00000548860 IL25Q9H293 177 aa16.9■□□□□ 0.3
CACNB3-209ENST00000548860 GLI2P10070 1586 aa16.89■□□□□ 0.29
CACNB3-209ENST00000548860 VWDEQ8N2E2 1590 aa16.89■□□□□ 0.29
CACNB3-209ENST00000548860 SASS6Q6UVJ0 657 aa16.89■□□□□ 0.29
CACNB3-209ENST00000548860 FILIP1Q7Z7B0 1213 aa16.89■□□□□ 0.29
CACNB3-209ENST00000548860 NFATC2IPQ8NCF5 419 aa16.89■□□□□ 0.29
CACNB3-209ENST00000548860 RBM8AQ9Y5S9 174 aaKnown RBP16.89■□□□□ 0.29
CACNB3-209ENST00000548860 QRICH2Q9H0J4 1663 aa16.89■□□□□ 0.29
CACNB3-209ENST00000548860 FRMPD1Q5SYB0 1578 aa16.89■□□□□ 0.29
CACNB3-209ENST00000548860 PTH1RQ03431 593 aa16.89■□□□□ 0.29
CACNB3-209ENST00000548860 ISM2Q6H9L7 571 aa16.89■□□□□ 0.29
CACNB3-209ENST00000548860 FAM135BQ49AJ0 1406 aa16.89■□□□□ 0.29
CACNB3-209ENST00000548860 ADGRB3O60242 1522 aa16.89■□□□□ 0.29
CACNB3-209ENST00000548860 TULP1O00294 542 aaPredicted RBP16.89■□□□□ 0.29
CACNB3-209ENST00000548860 DBF4Q9UBU7 674 aaPredicted RBP16.89■□□□□ 0.29
CACNB3-209ENST00000548860 ISY1Q9ULR0 285 aaKnown RBP16.89■□□□□ 0.29
CACNB3-209ENST00000548860 ANKRD24Q8TF21 1146 aa16.88■□□□□ 0.29
CACNB3-209ENST00000548860 TNMDQ9H2S6 317 aa16.88■□□□□ 0.29
CACNB3-209ENST00000548860 XAGE3Q8WTP9 111 aa16.88■□□□□ 0.29
CACNB3-209ENST00000548860 SPATA32Q96LK8 384 aa16.88■□□□□ 0.29
CACNB3-209ENST00000548860 NMIQ13287 307 aaPredicted RBP16.88■□□□□ 0.29
CACNB3-209ENST00000548860 CSPP1Q1MSJ5 1256 aa16.88■□□□□ 0.29
CACNB3-209ENST00000548860 ADCK5Q3MIX3 580 aa16.88■□□□□ 0.29
CACNB3-209ENST00000548860 FLT4P35916 1363 aa16.87■□□□□ 0.29
CACNB3-209ENST00000548860 ERCC4Q92889 916 aaPredicted RBP16.87■□□□□ 0.29
CACNB3-209ENST00000548860 SNX14Q9Y5W7 946 aa16.87■□□□□ 0.29
CACNB3-209ENST00000548860 A0A087WZG4 1122 aa16.87■□□□□ 0.29
CACNB3-209ENST00000548860 SDF4Q9BRK5 362 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms