RNA–Protein interactions for RNA: ENST00000548821.1

GCN1-205, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 504 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-205ENST00000548821 SRP68Q9UHB9 627 aaKnown RBP12.81□□□□□ -0.36
GCN1-205ENST00000548821 COL15A1P39059 1388 aa12.81□□□□□ -0.36
GCN1-205ENST00000548821 H0YIN7 160 aa12.8□□□□□ -0.36
GCN1-205ENST00000548821 POLRMTO00411 1230 aaKnown RBP12.8□□□□□ -0.36
GCN1-205ENST00000548821 PDE6BP35913 854 aa12.8□□□□□ -0.36
GCN1-205ENST00000548821 IL17REQ8NFR9 667 aa12.8□□□□□ -0.36
GCN1-205ENST00000548821 PNISRQ8TF01 805 aaKnown RBP12.8□□□□□ -0.36
GCN1-205ENST00000548821 ZNF652Q9Y2D9 606 aa12.8□□□□□ -0.36
GCN1-205ENST00000548821 KDM2BQ8NHM5 1336 aa12.8□□□□□ -0.36
GCN1-205ENST00000548821 CICQ96RK0 1608 aaPredicted RBP12.8□□□□□ -0.36
GCN1-205ENST00000548821 PXDNLA1KZ92 1463 aa12.79□□□□□ -0.36
GCN1-205ENST00000548821 MRC1P22897 1456 aa12.79□□□□□ -0.36
GCN1-205ENST00000548821 SERPINB2P05120 415 aa12.79□□□□□ -0.36
GCN1-205ENST00000548821 PPP2R1AP30153 589 aa12.79□□□□□ -0.36
GCN1-205ENST00000548821 EIF5P55010 431 aaKnown RBP12.79□□□□□ -0.36
GCN1-205ENST00000548821 WWC3Q9ULE0 1092 aa12.79□□□□□ -0.36
GCN1-205ENST00000548821 ZBTB1Q9Y2K1 713 aa12.79□□□□□ -0.36
GCN1-205ENST00000548821 HEG1Q9ULI3 1381 aa12.79□□□□□ -0.36
GCN1-205ENST00000548821 SNRPA1P09661 255 aaKnown RBP12.78□□□□□ -0.36
GCN1-205ENST00000548821 TTLL6Q8N841 843 aa12.78□□□□□ -0.36
GCN1-205ENST00000548821 ZNF526Q8TF50 670 aaPredicted RBP12.78□□□□□ -0.36
GCN1-205ENST00000548821 ZNF496Q96IT1 587 aaPredicted RBP12.78□□□□□ -0.36
GCN1-205ENST00000548821 SETDB2Q96T68 719 aa12.78□□□□□ -0.36
GCN1-205ENST00000548821 RSPH6AQ9H0K4 717 aa12.78□□□□□ -0.36
GCN1-205ENST00000548821 SCN11AQ9UI33 1791 aa12.78□□□□□ -0.36
GCN1-205ENST00000548821 C4AP0C0L4 1744 aa12.77□□□□□ -0.36
GCN1-205ENST00000548821 COL5A3P25940 1745 aaPredicted RBP12.77□□□□□ -0.36
GCN1-205ENST00000548821 RGL2O15211 777 aa12.77□□□□□ -0.37
GCN1-205ENST00000548821 TOMM70O94826 608 aa12.77□□□□□ -0.37
GCN1-205ENST00000548821 NFIXQ14938 502 aa12.77□□□□□ -0.37
GCN1-205ENST00000548821 CLEC4GQ6UXB4 293 aa12.77□□□□□ -0.37
GCN1-205ENST00000548821 ZNF330Q9Y3S2 320 aaPredicted RBP12.77□□□□□ -0.37
GCN1-205ENST00000548821 ZC3H4Q9UPT8 1303 aaKnown RBP12.77□□□□□ -0.37
GCN1-205ENST00000548821 ADCY9O60503 1353 aa12.77□□□□□ -0.37
GCN1-205ENST00000548821 HSPA6P17066 643 aa12.76□□□□□ -0.37
GCN1-205ENST00000548821 KCNA3P22001 575 aa12.76□□□□□ -0.37
GCN1-205ENST00000548821 ST5P78524 1137 aa12.76□□□□□ -0.37
GCN1-205ENST00000548821 DDR1Q08345 913 aa12.76□□□□□ -0.37
GCN1-205ENST00000548821 TAF7Q15545 349 aaPredicted RBP12.76□□□□□ -0.37
GCN1-205ENST00000548821 SOGA3Q5TF21 947 aa12.76□□□□□ -0.37
GCN1-205ENST00000548821 BRIP1Q9BX63 1249 aa12.76□□□□□ -0.37
GCN1-205ENST00000548821 CEMIPQ8WUJ3 1361 aa12.76□□□□□ -0.37
GCN1-205ENST00000548821 C9orf131Q5VYM1 1079 aa12.75□□□□□ -0.37
GCN1-205ENST00000548821 C2CD5Q86YS7 1000 aa12.75□□□□□ -0.37
GCN1-205ENST00000548821 PHACTR3Q96KR7 559 aa12.75□□□□□ -0.37
GCN1-205ENST00000548821 MAPK8IP3Q9UPT6 1336 aa12.75□□□□□ -0.37
GCN1-205ENST00000548821 CARMIL3Q8ND23 1372 aa12.74□□□□□ -0.37
GCN1-205ENST00000548821 RALBP1Q15311 655 aa12.74□□□□□ -0.37
GCN1-205ENST00000548821 DPY19L2Q6NUT2 758 aa12.74□□□□□ -0.37
GCN1-205ENST00000548821 BICDL1Q6ZP65 573 aa12.74□□□□□ -0.37
GCN1-205ENST00000548821 CNKSR1Q969H4 720 aa12.74□□□□□ -0.37
GCN1-205ENST00000548821 RNF181Q9P0P0 153 aa12.74□□□□□ -0.37
GCN1-205ENST00000548821 COL3A1P02461 1466 aaPredicted RBP12.73□□□□□ -0.37
GCN1-205ENST00000548821 GOLGB1Q14789 3259 aaKnown RBP12.73□□□□□ -0.37
GCN1-205ENST00000548821 LMNB1P20700 586 aa12.73□□□□□ -0.37
GCN1-205ENST00000548821 CHRNA5P30532 468 aa12.73□□□□□ -0.37
GCN1-205ENST00000548821 APLP1P51693 650 aa12.73□□□□□ -0.37
GCN1-205ENST00000548821 TPTE2Q6XPS3 522 aa12.73□□□□□ -0.37
GCN1-205ENST00000548821 DZIP3Q86Y13 1208 aaKnown RBP12.73□□□□□ -0.37
GCN1-205ENST00000548821 CNBD1Q8NA66 436 aa12.73□□□□□ -0.37
GCN1-205ENST00000548821 TBC1D2BQ9UPU7 963 aa12.73□□□□□ -0.37
GCN1-205ENST00000548821 KIF13BQ9NQT8 1826 aa12.73□□□□□ -0.37
GCN1-205ENST00000548821 KCPQ6ZWJ8 1503 aa12.72□□□□□ -0.37
GCN1-205ENST00000548821 LMOD3Q0VAK6 560 aa12.72□□□□□ -0.37
GCN1-205ENST00000548821 ZNF622Q969S3 477 aaKnown RBP eCLIP12.72□□□□□ -0.37
GCN1-205ENST00000548821 ADAMTS7Q9UKP4 1686 aa12.71□□□□□ -0.37
GCN1-205ENST00000548821 A1BGP04217 495 aa12.71□□□□□ -0.37
GCN1-205ENST00000548821 GTF2E1P29083 439 aaPredicted RBP12.71□□□□□ -0.37
GCN1-205ENST00000548821 FSTL1Q12841 308 aa12.71□□□□□ -0.37
GCN1-205ENST00000548821 MCM10Q7L590 875 aa12.71□□□□□ -0.37
GCN1-205ENST00000548821 NBPF5PQ86XG9 351 aaPredicted RBP12.71□□□□□ -0.37
GCN1-205ENST00000548821 RBM46Q8TBY0 533 aaKnown RBP12.71□□□□□ -0.37
GCN1-205ENST00000548821 TJP1Q07157 1748 aa12.71□□□□□ -0.38
GCN1-205ENST00000548821 MYH14Q7Z406 1995 aaKnown RBP12.7□□□□□ -0.38
GCN1-205ENST00000548821 KIF3CO14782 793 aa12.7□□□□□ -0.38
GCN1-205ENST00000548821 TBC1D9BQ66K14 1250 aa12.7□□□□□ -0.38
GCN1-205ENST00000548821 STYK1Q6J9G0 422 aa12.7□□□□□ -0.38
GCN1-205ENST00000548821 BCL2L12Q9HB09 334 aa12.7□□□□□ -0.38
GCN1-205ENST00000548821 MASTLQ96GX5 879 aa12.69□□□□□ -0.38
GCN1-205ENST00000548821 NYXQ9GZU5 481 aa12.69□□□□□ -0.38
GCN1-205ENST00000548821 BABAM1Q9NWV8 329 aa12.69□□□□□ -0.38
GCN1-205ENST00000548821 USP16Q9Y5T5 823 aa12.69□□□□□ -0.38
GCN1-205ENST00000548821 CAMTA2O94983 1202 aa12.68□□□□□ -0.38
GCN1-205ENST00000548821 VEGFAP15692 232 aaPredicted RBP12.68□□□□□ -0.38
GCN1-205ENST00000548821 ALDH1B1P30837 517 aa12.68□□□□□ -0.38
GCN1-205ENST00000548821 NFE2L2Q16236 605 aa12.68□□□□□ -0.38
GCN1-205ENST00000548821 PRR5LQ6MZQ0 368 aa12.68□□□□□ -0.38
GCN1-205ENST00000548821 KIF6Q6ZMV9 814 aa12.68□□□□□ -0.38
GCN1-205ENST00000548821 TMX4Q9H1E5 349 aaPredicted RBP12.68□□□□□ -0.38
GCN1-205ENST00000548821 GLTPD2A6NH11 291 aa12.67□□□□□ -0.38
GCN1-205ENST00000548821 ERVV-1B6SEH8 477 aa12.67□□□□□ -0.38
GCN1-205ENST00000548821 GRIPAP1Q4V328 841 aa12.67□□□□□ -0.38
GCN1-205ENST00000548821 SMC1BQ8NDV3 1235 aa12.67□□□□□ -0.38
GCN1-205ENST00000548821 N4BP2Q86UW6 1770 aaPredicted RBP12.66□□□□□ -0.38
GCN1-205ENST00000548821 NPR1P16066 1061 aa12.66□□□□□ -0.38
GCN1-205ENST00000548821 RRAGCQ9HB90 399 aa12.66□□□□□ -0.38
GCN1-205ENST00000548821 NIP7Q9Y221 180 aaKnown RBP eCLIP12.66□□□□□ -0.38
GCN1-205ENST00000548821 ERBB4Q15303 1308 aa12.65□□□□□ -0.38
GCN1-205ENST00000548821 KCNQ3O43525 872 aa12.65□□□□□ -0.38
GCN1-205ENST00000548821 SRGNP10124 158 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms