RNA–Protein interactions for RNA: ENST00000548640.5

TMEM106C-209, Transcript of transmembrane protein 106C, humanhuman

TSL 3

Gene TMEM106C, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-209ENST00000548640 CABP4P57796 275 aa17.29■□□□□ 0.36
TMEM106C-209ENST00000548640 TBC1D9Q6ZT07 1266 aa17.29■□□□□ 0.36
TMEM106C-209ENST00000548640 OSBPL3Q9H4L5 887 aa17.29■□□□□ 0.36
TMEM106C-209ENST00000548640 COL5A2P05997 1499 aaPredicted RBP17.29■□□□□ 0.36
TMEM106C-209ENST00000548640 SNRPA1P09661 255 aaKnown RBP17.28■□□□□ 0.36
TMEM106C-209ENST00000548640 NBR1Q14596 966 aa17.28■□□□□ 0.36
TMEM106C-209ENST00000548640 SSH3Q8TE77 659 aa17.28■□□□□ 0.36
TMEM106C-209ENST00000548640 FMNL2Q96PY5 1086 aa17.28■□□□□ 0.36
TMEM106C-209ENST00000548640 CARD10Q9BWT7 1032 aa17.28■□□□□ 0.36
TMEM106C-209ENST00000548640 ADCY9O60503 1353 aa17.28■□□□□ 0.36
TMEM106C-209ENST00000548640 AOX1Q06278 1338 aa17.27■□□□□ 0.36
TMEM106C-209ENST00000548640 APBB1O00213 710 aa17.27■□□□□ 0.36
TMEM106C-209ENST00000548640 HSCBQ8IWL3 235 aa17.27■□□□□ 0.36
TMEM106C-209ENST00000548640 ZCRB1Q8TBF4 217 aaKnown RBP17.27■□□□□ 0.36
TMEM106C-209ENST00000548640 CYP27B1O15528 508 aa17.26■□□□□ 0.35
TMEM106C-209ENST00000548640 GSPT1P15170 499 aaKnown RBP17.26■□□□□ 0.35
TMEM106C-209ENST00000548640 SLC4A3P48751 1232 aa17.26■□□□□ 0.35
TMEM106C-209ENST00000548640 NEXNQ0ZGT2 675 aa17.26■□□□□ 0.35
TMEM106C-209ENST00000548640 LARP1Q6PKG0 1096 aaKnown RBP17.26■□□□□ 0.35
TMEM106C-209ENST00000548640 NFATC2IPQ8NCF5 419 aa17.26■□□□□ 0.35
TMEM106C-209ENST00000548640 LINS1Q8NG48 757 aa17.26■□□□□ 0.35
TMEM106C-209ENST00000548640 MAP3K2Q9Y2U5 619 aa17.26■□□□□ 0.35
TMEM106C-209ENST00000548640 ERBB4Q15303 1308 aa17.25■□□□□ 0.35
TMEM106C-209ENST00000548640 ERVV-2B6SEH9 535 aa17.25■□□□□ 0.35
TMEM106C-209ENST00000548640 SMARCA5O60264 1052 aaPredicted RBP17.25■□□□□ 0.35
TMEM106C-209ENST00000548640 IL2RBP14784 551 aa17.25■□□□□ 0.35
TMEM106C-209ENST00000548640 EVA1CP58658 441 aa17.25■□□□□ 0.35
TMEM106C-209ENST00000548640 POLA2Q14181 598 aa17.25■□□□□ 0.35
TMEM106C-209ENST00000548640 C9orf78Q9NZ63 289 aaPredicted RBP17.25■□□□□ 0.35
TMEM106C-209ENST00000548640 EXOC6BQ9Y2D4 811 aa17.25■□□□□ 0.35
TMEM106C-209ENST00000548640 PNMA6EA0A0J9YXQ4 647 aa17.24■□□□□ 0.35
TMEM106C-209ENST00000548640 PDE1AP54750 535 aa17.24■□□□□ 0.35
TMEM106C-209ENST00000548640 ANXA1P04083 346 aa17.23■□□□□ 0.35
TMEM106C-209ENST00000548640 MTX1Q13505 466 aa17.23■□□□□ 0.35
TMEM106C-209ENST00000548640 PPP1R42Q7Z4L9 355 aa17.23■□□□□ 0.35
TMEM106C-209ENST00000548640 RIC3Q7Z5B4 369 aa17.23■□□□□ 0.35
TMEM106C-209ENST00000548640 C16orf71Q8IYS4 520 aaPredicted RBP17.23■□□□□ 0.35
TMEM106C-209ENST00000548640 KIF1BPQ96EK5 621 aa17.23■□□□□ 0.35
TMEM106C-209ENST00000548640 SRGAP3O43295 1099 aa17.22■□□□□ 0.35
TMEM106C-209ENST00000548640 REC8O95072 547 aa17.22■□□□□ 0.35
TMEM106C-209ENST00000548640 MX1P20591 662 aa17.22■□□□□ 0.35
TMEM106C-209ENST00000548640 SLC39A6Q13433 755 aa17.22■□□□□ 0.35
TMEM106C-209ENST00000548640 ERC1Q8IUD2 1116 aa17.22■□□□□ 0.35
TMEM106C-209ENST00000548640 SNX21Q969T3 373 aa17.22■□□□□ 0.35
TMEM106C-209ENST00000548640 TBC1D2Q9BYX2 928 aa17.22■□□□□ 0.35
TMEM106C-209ENST00000548640 STAP2Q9UGK3 403 aa17.22■□□□□ 0.35
TMEM106C-209ENST00000548640 LAMB4A4D0S4 1761 aa17.21■□□□□ 0.35
TMEM106C-209ENST00000548640 C5P01031 1676 aa17.21■□□□□ 0.35
TMEM106C-209ENST00000548640 SURF6O75683 361 aaKnown RBP17.21■□□□□ 0.35
TMEM106C-209ENST00000548640 SDSP20132 328 aa17.21■□□□□ 0.35
TMEM106C-209ENST00000548640 NKX1-1Q15270 411 aaPredicted RBP17.21■□□□□ 0.35
TMEM106C-209ENST00000548640 PROSER3Q2NL68 480 aa17.21■□□□□ 0.35
TMEM106C-209ENST00000548640 ZNF496Q96IT1 587 aaPredicted RBP17.21■□□□□ 0.35
TMEM106C-209ENST00000548640 OTUD7AQ8TE49 926 aaPredicted RBP17.2■□□□□ 0.34
TMEM106C-209ENST00000548640 BCL11AQ9H165 835 aa17.2■□□□□ 0.34
TMEM106C-209ENST00000548640 UTYO14607 1347 aa17.2■□□□□ 0.34
TMEM106C-209ENST00000548640 SALL3Q9BXA9 1300 aa17.2■□□□□ 0.34
TMEM106C-209ENST00000548640 GRM8O00222 908 aa17.19■□□□□ 0.34
TMEM106C-209ENST00000548640 NBPF7P0C2Y1 421 aaPredicted RBP17.19■□□□□ 0.34
TMEM106C-209ENST00000548640 OS9Q13438 667 aaPredicted RBP17.19■□□□□ 0.34
TMEM106C-209ENST00000548640 PDIA6Q15084 440 aa17.19■□□□□ 0.34
TMEM106C-209ENST00000548640 AHDC1Q5TGY3 1603 aaPredicted RBP17.18■□□□□ 0.34
TMEM106C-209ENST00000548640 PRAMEF22A3QJZ6 481 aa17.18■□□□□ 0.34
TMEM106C-209ENST00000548640 ERC2O15083 957 aa17.18■□□□□ 0.34
TMEM106C-209ENST00000548640 AIMP1Q12904 312 aaKnown RBP17.18■□□□□ 0.34
TMEM106C-209ENST00000548640 RHPN1Q8TCX5 695 aa17.18■□□□□ 0.34
TMEM106C-209ENST00000548640 XAGE3Q8WTP9 111 aa17.18■□□□□ 0.34
TMEM106C-209ENST00000548640 METTL22Q9BUU2 404 aaPredicted RBP17.18■□□□□ 0.34
TMEM106C-209ENST00000548640 STRN4Q9NRL3 753 aa17.18■□□□□ 0.34
TMEM106C-209ENST00000548640 COL14A1Q05707 1796 aaKnown RBP17.17■□□□□ 0.34
TMEM106C-209ENST00000548640 GPATCH3Q96I76 525 aa17.17■□□□□ 0.34
TMEM106C-209ENST00000548640 MYL6BP14649 208 aa17.16■□□□□ 0.34
TMEM106C-209ENST00000548640 RABEP1Q15276 862 aa17.16■□□□□ 0.34
TMEM106C-209ENST00000548640 ANKRD13DQ6ZTN6 518 aa17.16■□□□□ 0.34
TMEM106C-209ENST00000548640 MCCP23508 829 aa17.15■□□□□ 0.34
TMEM106C-209ENST00000548640 NFKBIBQ15653 356 aa17.15■□□□□ 0.34
TMEM106C-209ENST00000548640 COPS6Q7L5N1 327 aa17.15■□□□□ 0.34
TMEM106C-209ENST00000548640 PAPPAQ13219 1627 aa17.14■□□□□ 0.33
TMEM106C-209ENST00000548640 COL22A1Q8NFW1 1626 aaPredicted RBP17.14■□□□□ 0.33
TMEM106C-209ENST00000548640 CLASRPQ8N2M8 674 aaKnown RBP17.14■□□□□ 0.33
TMEM106C-209ENST00000548640 IL27Q8NEV9 243 aa17.14■□□□□ 0.33
TMEM106C-209ENST00000548640 MYD88Q99836 296 aa17.14■□□□□ 0.33
TMEM106C-209ENST00000548640 CHMP5Q9NZZ3 219 aa17.14■□□□□ 0.33
TMEM106C-209ENST00000548640 TTC41PQ6P2S7 1318 aa17.14■□□□□ 0.33
TMEM106C-209ENST00000548640 COL15A1P39059 1388 aa17.14■□□□□ 0.33
TMEM106C-209ENST00000548640 NEURL1BA8MQ27 555 aa17.13■□□□□ 0.33
TMEM106C-209ENST00000548640 TRIM6-TRIM34B2RNG4 842 aa17.13■□□□□ 0.33
TMEM106C-209ENST00000548640 EPB41L2O43491 1005 aaKnown RBP17.13■□□□□ 0.33
TMEM106C-209ENST00000548640 CWF19L2Q2TBE0 894 aaKnown RBP17.13■□□□□ 0.33
TMEM106C-209ENST00000548640 PLBD2Q8NHP8 589 aa17.13■□□□□ 0.33
TMEM106C-209ENST00000548640 DDX54Q8TDD1 881 aaKnown RBP17.13■□□□□ 0.33
TMEM106C-209ENST00000548640 USP26Q9BXU7 913 aa17.13■□□□□ 0.33
TMEM106C-209ENST00000548640 USP16Q9Y5T5 823 aa17.13■□□□□ 0.33
TMEM106C-209ENST00000548640 USP42Q9H9J4 1324 aaKnown RBP17.13■□□□□ 0.33
TMEM106C-209ENST00000548640 ROBO1Q9Y6N7 1651 aa17.13■□□□□ 0.33
TMEM106C-209ENST00000548640 TNS2Q63HR2 1409 aa17.13■□□□□ 0.33
TMEM106C-209ENST00000548640 UBR2Q8IWV8 1755 aa17.12■□□□□ 0.33
TMEM106C-209ENST00000548640 G3BP1Q13283 466 aaKnown RBP eCLIP17.12■□□□□ 0.33
TMEM106C-209ENST00000548640 GCKRQ14397 625 aa17.12■□□□□ 0.33
TMEM106C-209ENST00000548640 TEX13AQ9BXU3 409 aaPredicted RBP17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms