RNA–Protein interactions for RNA: ENST00000548570.1

APP-217, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 361 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-217ENST00000548570 EXOC5O00471 708 aa6.63□□□□□ -1.35
APP-217ENST00000548570 LRRC37A3O60309 1634 aa6.63□□□□□ -1.35
APP-217ENST00000548570 RGPD2P0DJD1 1756 aa6.63□□□□□ -1.35
APP-217ENST00000548570 PBX2P40425 430 aa6.63□□□□□ -1.35
APP-217ENST00000548570 AMOTQ4VCS5 1084 aa6.63□□□□□ -1.35
APP-217ENST00000548570 TMEM92Q6UXU6 159 aa6.63□□□□□ -1.35
APP-217ENST00000548570 MPRIPQ6WCQ1 1025 aa6.63□□□□□ -1.35
APP-217ENST00000548570 ILDR2Q71H61 639 aa6.63□□□□□ -1.35
APP-217ENST00000548570 MCM10Q7L590 875 aa6.63□□□□□ -1.35
APP-217ENST00000548570 CEMIPQ8WUJ3 1361 aa6.63□□□□□ -1.35
APP-217ENST00000548570 BCL9O00512 1426 aa6.62□□□□□ -1.35
APP-217ENST00000548570 PCDH11XQ9BZA7 1347 aa6.62□□□□□ -1.35
APP-217ENST00000548570 PCDH11YQ9BZA8 1340 aa6.62□□□□□ -1.35
APP-217ENST00000548570 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.62□□□□□ -1.35
APP-217ENST00000548570 RNMTO43148 476 aaKnown RBP6.62□□□□□ -1.35
APP-217ENST00000548570 KCNQ2O43526 872 aa6.62□□□□□ -1.35
APP-217ENST00000548570 RIPK4P57078 832 aa6.62□□□□□ -1.35
APP-217ENST00000548570 LSM11P83369 360 aaKnown RBP eCLIP6.62□□□□□ -1.35
APP-217ENST00000548570 NEUROD2Q15784 382 aa6.62□□□□□ -1.35
APP-217ENST00000548570 AKAP4Q5JQC9 854 aa6.62□□□□□ -1.35
APP-217ENST00000548570 KRT27Q7Z3Y8 459 aa6.62□□□□□ -1.35
APP-217ENST00000548570 WWC1Q8IX03 1113 aa6.62□□□□□ -1.35
APP-217ENST00000548570 IFNL2Q8IZJ0 200 aa6.62□□□□□ -1.35
APP-217ENST00000548570 GAS2L2Q8NHY3 880 aa6.62□□□□□ -1.35
APP-217ENST00000548570 ZFP91Q96JP5 570 aaPredicted RBP6.62□□□□□ -1.35
APP-217ENST00000548570 SPG7Q9UQ90 795 aa6.62□□□□□ -1.35
APP-217ENST00000548570 MAP3K5Q99683 1374 aa6.61□□□□□ -1.35
APP-217ENST00000548570 GNAT3A8MTJ3 354 aa6.61□□□□□ -1.35
APP-217ENST00000548570 KCNQ3O43525 872 aa6.61□□□□□ -1.35
APP-217ENST00000548570 CCDC27Q2M243 656 aa6.61□□□□□ -1.35
APP-217ENST00000548570 SALL2Q9Y467 1007 aaPredicted RBP6.61□□□□□ -1.35
APP-217ENST00000548570 SHANK3Q9BYB0 1731 aa6.61□□□□□ -1.35
APP-217ENST00000548570 MAPK8IP3Q9UPT6 1336 aa6.6□□□□□ -1.35
APP-217ENST00000548570 PKD1L3Q7Z443 1732 aa6.6□□□□□ -1.35
APP-217ENST00000548570 PARP4Q9UKK3 1724 aaKnown RBP6.6□□□□□ -1.35
APP-217ENST00000548570 A0A0G2JS52 829 aa6.6□□□□□ -1.35
APP-217ENST00000548570 HTATSF1O43719 755 aaKnown RBP6.6□□□□□ -1.35
APP-217ENST00000548570 ZNF853P0CG23 659 aa6.6□□□□□ -1.35
APP-217ENST00000548570 PRIM1P49642 420 aaKnown RBP6.6□□□□□ -1.35
APP-217ENST00000548570 MYT1Q01538 1121 aa6.6□□□□□ -1.35
APP-217ENST00000548570 PDE3BQ13370 1112 aa6.6□□□□□ -1.35
APP-217ENST00000548570 PIGBQ92521 554 aa6.6□□□□□ -1.35
APP-217ENST00000548570 CDCA7LQ96GN5 454 aa6.6□□□□□ -1.35
APP-217ENST00000548570 ACSBG1Q96GR2 724 aa6.6□□□□□ -1.35
APP-217ENST00000548570 DCAF5Q96JK2 942 aa6.6□□□□□ -1.35
APP-217ENST00000548570 MIS18AQ9NYP9 233 aa6.6□□□□□ -1.35
APP-217ENST00000548570 ADAMTS7Q9UKP4 1686 aa6.59□□□□□ -1.35
APP-217ENST00000548570 CHL1O00533 1208 aa6.59□□□□□ -1.35
APP-217ENST00000548570 TRMT2AQ8IZ69 625 aaKnown RBP6.59□□□□□ -1.35
APP-217ENST00000548570 NFATC2IPQ8NCF5 419 aa6.59□□□□□ -1.35
APP-217ENST00000548570 MS4A4AQ96JQ5 239 aa6.59□□□□□ -1.35
APP-217ENST00000548570 SLC4A9Q96Q91 983 aa6.59□□□□□ -1.35
APP-217ENST00000548570 ARXQ96QS3 562 aa6.59□□□□□ -1.35
APP-217ENST00000548570 PNNQ9H307 717 aaKnown RBP6.59□□□□□ -1.35
APP-217ENST00000548570 SLC52A2Q9HAB3 445 aa6.59□□□□□ -1.35
APP-217ENST00000548570 HCSTQ9UBK5 93 aa6.59□□□□□ -1.35
APP-217ENST00000548570 MRC1P22897 1456 aa6.59□□□□□ -1.36
APP-217ENST00000548570 EP400Q96L91 3159 aa6.59□□□□□ -1.36
APP-217ENST00000548570 WNK3Q9BYP7 1800 aa6.58□□□□□ -1.36
APP-217ENST00000548570 ERVV-2B6SEH9 535 aa6.58□□□□□ -1.36
APP-217ENST00000548570 HNRNPUQ00839 825 aaKnown RBP eCLIP6.58□□□□□ -1.36
APP-217ENST00000548570 SLC39A6Q13433 755 aa6.58□□□□□ -1.36
APP-217ENST00000548570 C1orf141Q5JVX7 400 aa6.58□□□□□ -1.36
APP-217ENST00000548570 ATG3Q9NT62 314 aa6.58□□□□□ -1.36
APP-217ENST00000548570 ASAP1Q9ULH1 1129 aa6.58□□□□□ -1.36
APP-217ENST00000548570 TOGARAM1Q9Y4F4 1720 aa6.58□□□□□ -1.36
APP-217ENST00000548570 HEG1Q9ULI3 1381 aa6.57□□□□□ -1.36
APP-217ENST00000548570 ZBED9Q6R2W3 1325 aa6.57□□□□□ -1.36
APP-217ENST00000548570 PRAMEF22A3QJZ6 481 aa6.57□□□□□ -1.36
APP-217ENST00000548570 TRIM37O94972 964 aa6.57□□□□□ -1.36
APP-217ENST00000548570 HSP90AB1P08238 724 aaKnown RBP6.57□□□□□ -1.36
APP-217ENST00000548570 CABP4P57796 275 aa6.57□□□□□ -1.36
APP-217ENST00000548570 SLFN5Q08AF3 891 aa6.57□□□□□ -1.36
APP-217ENST00000548570 KRT24Q2M2I5 525 aa6.57□□□□□ -1.36
APP-217ENST00000548570 FAM196AQ6ZSG2 479 aa6.57□□□□□ -1.36
APP-217ENST00000548570 WDR63Q8IWG1 891 aa6.57□□□□□ -1.36
APP-217ENST00000548570 TSR2Q969E8 191 aaKnown RBP6.57□□□□□ -1.36
APP-217ENST00000548570 MBIPQ9NS73 344 aa6.57□□□□□ -1.36
APP-217ENST00000548570 PSDA5PKW4 1024 aaPredicted RBP6.56□□□□□ -1.36
APP-217ENST00000548570 EIF4A1P60842 406 aaKnown RBP6.56□□□□□ -1.36
APP-217ENST00000548570 LMOD3Q0VAK6 560 aa6.56□□□□□ -1.36
APP-217ENST00000548570 TAF7Q15545 349 aaPredicted RBP6.56□□□□□ -1.36
APP-217ENST00000548570 DUSP27Q5VZP5 1158 aa6.56□□□□□ -1.36
APP-217ENST00000548570 CFAP44Q96MT7 982 aa6.56□□□□□ -1.36
APP-217ENST00000548570 YTHDC1Q96MU7 727 aaKnown RBP6.56□□□□□ -1.36
APP-217ENST00000548570 BCL11BQ9C0K0 894 aaPredicted RBP6.56□□□□□ -1.36
APP-217ENST00000548570 PLA2G2EQ9NZK7 142 aa6.56□□□□□ -1.36
APP-217ENST00000548570 KCPQ6ZWJ8 1503 aa6.55□□□□□ -1.36
APP-217ENST00000548570 IL16Q14005 1332 aa6.55□□□□□ -1.36
APP-217ENST00000548570 FANCIQ9NVI1 1328 aa6.55□□□□□ -1.36
APP-217ENST00000548570 BTBD11A6QL63 1104 aa6.55□□□□□ -1.36
APP-217ENST00000548570 NEFMP07197 916 aa6.55□□□□□ -1.36
APP-217ENST00000548570 KCNQ4P56696 695 aa6.55□□□□□ -1.36
APP-217ENST00000548570 ITPK1Q13572 414 aa6.55□□□□□ -1.36
APP-217ENST00000548570 ZNF790Q6PG37 636 aa6.55□□□□□ -1.36
APP-217ENST00000548570 NGEFQ8N5V2 710 aa6.55□□□□□ -1.36
APP-217ENST00000548570 TSPYL6Q8N831 410 aa6.55□□□□□ -1.36
APP-217ENST00000548570 C8orf58Q8NAV2 365 aa6.55□□□□□ -1.36
APP-217ENST00000548570 RTF1Q92541 710 aaKnown RBP6.55□□□□□ -1.36
APP-217ENST00000548570 SYTL4Q96C24 671 aaPredicted RBP6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms