RNA–Protein interactions for RNA: ENST00000548120.1

RNF41-204, Transcript of ring finger protein 41, humanhuman

TSL 2

Gene RNF41, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-204ENST00000548120 CYP27B1O15528 508 aa9.32□□□□□ -0.92
RNF41-204ENST00000548120 HSPA5P11021 654 aaKnown RBP9.31□□□□□ -0.92
RNF41-204ENST00000548120 FBLN1P23142 703 aa9.31□□□□□ -0.92
RNF41-204ENST00000548120 RFC4P35249 363 aa9.31□□□□□ -0.92
RNF41-204ENST00000548120 TMC1Q8TDI8 760 aa9.31□□□□□ -0.92
RNF41-204ENST00000548120 ARHGEF1Q92888 912 aaKnown RBP9.31□□□□□ -0.92
RNF41-204ENST00000548120 CD163L1Q9NR16 1453 aa9.31□□□□□ -0.92
RNF41-204ENST00000548120 TIAM2Q8IVF5 1701 aa9.31□□□□□ -0.92
RNF41-204ENST00000548120 EDC4Q6P2E9 1401 aaKnown RBP9.31□□□□□ -0.92
RNF41-204ENST00000548120 SMG6Q86US8 1419 aaKnown RBP9.31□□□□□ -0.92
RNF41-204ENST00000548120 TMEM88BA6NKF7 163 aa9.3□□□□□ -0.92
RNF41-204ENST00000548120 GALR2O43603 387 aaPredicted RBP9.3□□□□□ -0.92
RNF41-204ENST00000548120 DPY19L2Q6NUT2 758 aa9.3□□□□□ -0.92
RNF41-204ENST00000548120 HDGFL2Q7Z4V5 671 aaPredicted RBP9.3□□□□□ -0.92
RNF41-204ENST00000548120 TMOD3Q9NYL9 352 aa9.3□□□□□ -0.92
RNF41-204ENST00000548120 ASAP1Q9ULH1 1129 aa9.3□□□□□ -0.92
RNF41-204ENST00000548120 PASKQ96RG2 1323 aa9.3□□□□□ -0.92
RNF41-204ENST00000548120 CENPBP07199 599 aaPredicted RBP9.29□□□□□ -0.92
RNF41-204ENST00000548120 MAP2K1Q02750 393 aaPredicted RBP9.29□□□□□ -0.92
RNF41-204ENST00000548120 DDR1Q08345 913 aa9.29□□□□□ -0.92
RNF41-204ENST00000548120 DDX10Q13206 875 aaKnown RBP9.29□□□□□ -0.92
RNF41-204ENST00000548120 RTL1A6NKG5 1358 aa9.28□□□□□ -0.92
RNF41-204ENST00000548120 SPDYE4A6NLX3 237 aa9.28□□□□□ -0.92
RNF41-204ENST00000548120 NFKBIEO00221 500 aa9.28□□□□□ -0.92
RNF41-204ENST00000548120 EIF4G2P78344 907 aaKnown RBP eCLIP9.28□□□□□ -0.92
RNF41-204ENST00000548120 PLSCR2Q9NRY7 297 aa9.28□□□□□ -0.92
RNF41-204ENST00000548120 SRP68Q9UHB9 627 aaKnown RBP9.28□□□□□ -0.92
RNF41-204ENST00000548120 TSKSQ9UJT2 592 aa9.28□□□□□ -0.92
RNF41-204ENST00000548120 A0A1W2PP64 1363 aa9.27□□□□□ -0.93
RNF41-204ENST00000548120 KDRP35968 1356 aa9.27□□□□□ -0.93
RNF41-204ENST00000548120 MAP2P11137 1827 aaKnown RBP9.27□□□□□ -0.93
RNF41-204ENST00000548120 GRM1Q13255 1194 aa9.27□□□□□ -0.93
RNF41-204ENST00000548120 FKBP8Q14318 412 aa9.27□□□□□ -0.93
RNF41-204ENST00000548120 RRS1Q15050 365 aaKnown RBP9.27□□□□□ -0.93
RNF41-204ENST00000548120 COG3Q96JB2 828 aa9.27□□□□□ -0.93
RNF41-204ENST00000548120 BEGAINQ9BUH8 593 aa9.27□□□□□ -0.93
RNF41-204ENST00000548120 MCOLN1Q9GZU1 580 aa9.27□□□□□ -0.93
RNF41-204ENST00000548120 WDR33Q9C0J8 1336 aaKnown RBP9.27□□□□□ -0.93
RNF41-204ENST00000548120 RGPD2P0DJD1 1756 aa9.27□□□□□ -0.93
RNF41-204ENST00000548120 RASSF10A6NK89 507 aa9.26□□□□□ -0.93
RNF41-204ENST00000548120 DDNO94850 711 aaPredicted RBP9.26□□□□□ -0.93
RNF41-204ENST00000548120 DEFB115Q30KQ5 88 aa9.26□□□□□ -0.93
RNF41-204ENST00000548120 ERFEQ4G0M1 354 aa9.26□□□□□ -0.93
RNF41-204ENST00000548120 PAXIP1Q6ZW49 1069 aaPredicted RBP9.26□□□□□ -0.93
RNF41-204ENST00000548120 LDHDQ86WU2 507 aa9.26□□□□□ -0.93
RNF41-204ENST00000548120 YTHDC1Q96MU7 727 aaKnown RBP9.26□□□□□ -0.93
RNF41-204ENST00000548120 ABT1Q9ULW3 272 aaKnown RBP9.26□□□□□ -0.93
RNF41-204ENST00000548120 WASHC2AQ641Q2 1341 aa9.26□□□□□ -0.93
RNF41-204ENST00000548120 POLRMTO00411 1230 aaKnown RBP9.25□□□□□ -0.93
RNF41-204ENST00000548120 RPS6KA4O75676 772 aa9.25□□□□□ -0.93
RNF41-204ENST00000548120 EAPPQ56P03 285 aaPredicted RBP9.25□□□□□ -0.93
RNF41-204ENST00000548120 PRPF38BQ5VTL8 546 aaKnown RBP9.25□□□□□ -0.93
RNF41-204ENST00000548120 SLC12A5Q9H2X9 1139 aa9.25□□□□□ -0.93
RNF41-204ENST00000548120 ATG3Q9NT62 314 aa9.25□□□□□ -0.93
RNF41-204ENST00000548120 SBF1O95248 1867 aa9.25□□□□□ -0.93
RNF41-204ENST00000548120 CNTNAP4Q9C0A0 1308 aa9.25□□□□□ -0.93
RNF41-204ENST00000548120 SOX10P56693 466 aa9.24□□□□□ -0.93
RNF41-204ENST00000548120 TTLL6Q8N841 843 aa9.24□□□□□ -0.93
RNF41-204ENST00000548120 SLC4A9Q96Q91 983 aa9.24□□□□□ -0.93
RNF41-204ENST00000548120 TERF2IPQ9NYB0 399 aa9.24□□□□□ -0.93
RNF41-204ENST00000548120 USP42Q9H9J4 1324 aaKnown RBP9.24□□□□□ -0.93
RNF41-204ENST00000548120 ITGB4P16144 1822 aa9.24□□□□□ -0.93
RNF41-204ENST00000548120 TNRC18O15417 2968 aaPredicted RBP9.24□□□□□ -0.93
RNF41-204ENST00000548120 ROCK2O75116 1388 aaKnown RBP9.24□□□□□ -0.93
RNF41-204ENST00000548120 IQCA1LA6NCM1 817 aa9.23□□□□□ -0.93
RNF41-204ENST00000548120 ITGBL1O95965 494 aaPredicted RBP9.23□□□□□ -0.93
RNF41-204ENST00000548120 NKX1-1Q15270 411 aaPredicted RBP9.23□□□□□ -0.93
RNF41-204ENST00000548120 RC3H1Q5TC82 1133 aaKnown RBP9.23□□□□□ -0.93
RNF41-204ENST00000548120 PHF12Q96QT6 1004 aa9.23□□□□□ -0.93
RNF41-204ENST00000548120 VIRMAQ69YN4 1812 aaKnown RBP9.22□□□□□ -0.93
RNF41-204ENST00000548120 DGKZQ13574 1117 aa9.22□□□□□ -0.93
RNF41-204ENST00000548120 HSP90AB2PQ58FF8 381 aa9.22□□□□□ -0.93
RNF41-204ENST00000548120 C2CD5Q86YS7 1000 aa9.22□□□□□ -0.93
RNF41-204ENST00000548120 TAF1DQ9H5J8 278 aaPredicted RBP9.22□□□□□ -0.93
RNF41-204ENST00000548120 SPG7Q9UQ90 795 aa9.22□□□□□ -0.93
RNF41-204ENST00000548120 MAP1SQ66K74 1059 aaPredicted RBP9.21□□□□□ -0.94
RNF41-204ENST00000548120 CYP4F22Q6NT55 531 aa9.21□□□□□ -0.94
RNF41-204ENST00000548120 CAPNS2Q96L46 248 aa9.21□□□□□ -0.94
RNF41-204ENST00000548120 KIF7Q2M1P5 1343 aa9.21□□□□□ -0.94
RNF41-204ENST00000548120 THSD7BQ9C0I4 1608 aa9.2□□□□□ -0.94
RNF41-204ENST00000548120 LTBP1Q14766 1721 aa9.2□□□□□ -0.94
RNF41-204ENST00000548120 CCER2I3L3R5 266 aa9.2□□□□□ -0.94
RNF41-204ENST00000548120 C21orf2O43822 256 aa9.2□□□□□ -0.94
RNF41-204ENST00000548120 CRKLP46109 303 aaKnown RBP9.2□□□□□ -0.94
RNF41-204ENST00000548120 USPL1Q5W0Q7 1092 aa9.2□□□□□ -0.94
RNF41-204ENST00000548120 OTUD5Q96G74 571 aa9.2□□□□□ -0.94
RNF41-204ENST00000548120 GPR101Q96P66 508 aaPredicted RBP9.2□□□□□ -0.94
RNF41-204ENST00000548120 TAOK3Q9H2K8 898 aa9.2□□□□□ -0.94
RNF41-204ENST00000548120 INSRP06213 1382 aa9.2□□□□□ -0.94
RNF41-204ENST00000548120 CARMIL3Q8ND23 1372 aa9.2□□□□□ -0.94
RNF41-204ENST00000548120 H0YIN7 160 aa9.19□□□□□ -0.94
RNF41-204ENST00000548120 ANP32CO43423 234 aa9.19□□□□□ -0.94
RNF41-204ENST00000548120 PHKG2P15735 406 aa9.19□□□□□ -0.94
RNF41-204ENST00000548120 TM4SF1P30408 202 aa9.19□□□□□ -0.94
RNF41-204ENST00000548120 ECE1P42892 770 aa9.19□□□□□ -0.94
RNF41-204ENST00000548120 CNTROBQ8N137 903 aa9.19□□□□□ -0.94
RNF41-204ENST00000548120 L3MBTL3Q96JM7 780 aaPredicted RBP9.19□□□□□ -0.94
RNF41-204ENST00000548120 FLT4P35916 1363 aa9.19□□□□□ -0.94
RNF41-204ENST00000548120 AOC2O75106 756 aa9.18□□□□□ -0.94
RNF41-204ENST00000548120 PTCD1O75127 700 aaKnown RBP9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms