RNA–Protein interactions for RNA: ENST00000547939.5

TUBA1A-204, Transcript of tubulin alpha 1a, humanhuman

TSL 3

Gene TUBA1A, Length 946 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1A-204ENST00000547939 NEFMP07197 916 aa13.97□□□□□ -0.17
TUBA1A-204ENST00000547939 CRKLP46109 303 aaKnown RBP13.97□□□□□ -0.17
TUBA1A-204ENST00000547939 SLC39A6Q13433 755 aa13.97□□□□□ -0.17
TUBA1A-204ENST00000547939 COL3A1P02461 1466 aaPredicted RBP13.97□□□□□ -0.17
TUBA1A-204ENST00000547939 RTF1Q92541 710 aaKnown RBP13.96□□□□□ -0.17
TUBA1A-204ENST00000547939 RSPH6AQ9H0K4 717 aa13.96□□□□□ -0.17
TUBA1A-204ENST00000547939 MMP10P09238 476 aa13.95□□□□□ -0.18
TUBA1A-204ENST00000547939 DNAJC10Q8IXB1 793 aa13.95□□□□□ -0.18
TUBA1A-204ENST00000547939 VSIG10Q8N0Z9 540 aa13.95□□□□□ -0.18
TUBA1A-204ENST00000547939 IL17REQ8NFR9 667 aa13.95□□□□□ -0.18
TUBA1A-204ENST00000547939 PHACTR3Q96KR7 559 aa13.95□□□□□ -0.18
TUBA1A-204ENST00000547939 CCDC87Q9NVE4 849 aa13.95□□□□□ -0.18
TUBA1A-204ENST00000547939 VIRMAQ69YN4 1812 aaKnown RBP13.94□□□□□ -0.18
TUBA1A-204ENST00000547939 STARD3NLO95772 234 aa13.94□□□□□ -0.18
TUBA1A-204ENST00000547939 ZPR1O75312 459 aa13.93□□□□□ -0.18
TUBA1A-204ENST00000547939 GYS1P13807 737 aa13.93□□□□□ -0.18
TUBA1A-204ENST00000547939 RALBP1Q15311 655 aa13.93□□□□□ -0.18
TUBA1A-204ENST00000547939 INTS5Q6P9B9 1019 aaKnown RBP13.93□□□□□ -0.18
TUBA1A-204ENST00000547939 TEX13AQ9BXU3 409 aaPredicted RBP13.93□□□□□ -0.18
TUBA1A-204ENST00000547939 PNNQ9H307 717 aaKnown RBP13.93□□□□□ -0.18
TUBA1A-204ENST00000547939 PARP3Q9Y6F1 533 aa13.93□□□□□ -0.18
TUBA1A-204ENST00000547939 CYP19A1P11511 503 aaPredicted RBP13.92□□□□□ -0.18
TUBA1A-204ENST00000547939 C9orf131Q5VYM1 1079 aa13.92□□□□□ -0.18
TUBA1A-204ENST00000547939 ZNF790Q6PG37 636 aa13.92□□□□□ -0.18
TUBA1A-204ENST00000547939 C4AP0C0L4 1744 aa13.92□□□□□ -0.18
TUBA1A-204ENST00000547939 TIAM2Q8IVF5 1701 aa13.91□□□□□ -0.18
TUBA1A-204ENST00000547939 BTBD11A6QL63 1104 aa13.91□□□□□ -0.18
TUBA1A-204ENST00000547939 HTATSF1O43719 755 aaKnown RBP13.91□□□□□ -0.18
TUBA1A-204ENST00000547939 DDX10Q13206 875 aaKnown RBP13.91□□□□□ -0.18
TUBA1A-204ENST00000547939 FAM161AQ3B820 660 aa13.91□□□□□ -0.18
TUBA1A-204ENST00000547939 NPM2Q86SE8 214 aaKnown RBP13.91□□□□□ -0.18
TUBA1A-204ENST00000547939 RRAGCQ9HB90 399 aa13.91□□□□□ -0.18
TUBA1A-204ENST00000547939 MRC1P22897 1456 aa13.91□□□□□ -0.18
TUBA1A-204ENST00000547939 A0A0G2JLW4 131 aa13.9□□□□□ -0.18
TUBA1A-204ENST00000547939 TGFB2P61812 414 aa13.9□□□□□ -0.18
TUBA1A-204ENST00000547939 C16orf71Q8IYS4 520 aaPredicted RBP13.9□□□□□ -0.18
TUBA1A-204ENST00000547939 FMNL2Q96PY5 1086 aa13.9□□□□□ -0.18
TUBA1A-204ENST00000547939 BCS1LQ9Y276 419 aa13.9□□□□□ -0.18
TUBA1A-204ENST00000547939 ZNF831Q5JPB2 1677 aa13.9□□□□□ -0.18
TUBA1A-204ENST00000547939 MYH14Q7Z406 1995 aaKnown RBP13.9□□□□□ -0.18
TUBA1A-204ENST00000547939 USP42Q9H9J4 1324 aaKnown RBP13.9□□□□□ -0.19
TUBA1A-204ENST00000547939 A0A087WZG4 1122 aa13.89□□□□□ -0.19
TUBA1A-204ENST00000547939 ARHGAP27Q6ZUM4 889 aa13.89□□□□□ -0.19
TUBA1A-204ENST00000547939 ZNF496Q96IT1 587 aaPredicted RBP13.89□□□□□ -0.19
TUBA1A-204ENST00000547939 SRP68Q9UHB9 627 aaKnown RBP13.89□□□□□ -0.19
TUBA1A-204ENST00000547939 SOS1Q07889 1333 aaPredicted RBP13.89□□□□□ -0.19
TUBA1A-204ENST00000547939 CEMIPQ8WUJ3 1361 aa13.88□□□□□ -0.19
TUBA1A-204ENST00000547939 FOXN1O15353 648 aa13.88□□□□□ -0.19
TUBA1A-204ENST00000547939 KCNA3P22001 575 aa13.88□□□□□ -0.19
TUBA1A-204ENST00000547939 CANXP27824 592 aaKnown RBP13.88□□□□□ -0.19
TUBA1A-204ENST00000547939 MCM10Q7L590 875 aa13.88□□□□□ -0.19
TUBA1A-204ENST00000547939 SMC1BQ8NDV3 1235 aa13.88□□□□□ -0.19
TUBA1A-204ENST00000547939 ZBTB1Q9Y2K1 713 aa13.88□□□□□ -0.19
TUBA1A-204ENST00000547939 HEG1Q9ULI3 1381 aa13.87□□□□□ -0.19
TUBA1A-204ENST00000547939 SCN11AQ9UI33 1791 aa13.87□□□□□ -0.19
TUBA1A-204ENST00000547939 FKBP8Q14318 412 aa13.87□□□□□ -0.19
TUBA1A-204ENST00000547939 USPL1Q5W0Q7 1092 aa13.87□□□□□ -0.19
TUBA1A-204ENST00000547939 NARFQ9UHQ1 456 aa13.87□□□□□ -0.19
TUBA1A-204ENST00000547939 MAPK8IP3Q9UPT6 1336 aa13.87□□□□□ -0.19
TUBA1A-204ENST00000547939 COL5A3P25940 1745 aaPredicted RBP13.87□□□□□ -0.19
TUBA1A-204ENST00000547939 DICER1Q9UPY3 1922 aaKnown RBP13.86□□□□□ -0.19
TUBA1A-204ENST00000547939 DPEP1P16444 411 aa13.86□□□□□ -0.19
TUBA1A-204ENST00000547939 ZEB1P37275 1124 aaPredicted RBP13.86□□□□□ -0.19
TUBA1A-204ENST00000547939 TAF7Q15545 349 aaPredicted RBP13.86□□□□□ -0.19
TUBA1A-204ENST00000547939 COL15A1P39059 1388 aa13.85□□□□□ -0.19
TUBA1A-204ENST00000547939 DCTN1Q14203 1278 aa13.85□□□□□ -0.19
TUBA1A-204ENST00000547939 ZNF330Q9Y3S2 320 aaPredicted RBP13.85□□□□□ -0.19
TUBA1A-204ENST00000547939 KDM2BQ8NHM5 1336 aa13.85□□□□□ -0.19
TUBA1A-204ENST00000547939 SNRPA1P09661 255 aaKnown RBP13.84□□□□□ -0.19
TUBA1A-204ENST00000547939 TM4SF1P30408 202 aa13.84□□□□□ -0.19
TUBA1A-204ENST00000547939 IL6STP40189 918 aaPredicted RBP13.84□□□□□ -0.19
TUBA1A-204ENST00000547939 EIF5P55010 431 aaKnown RBP13.84□□□□□ -0.19
TUBA1A-204ENST00000547939 NFE2L2Q16236 605 aa13.84□□□□□ -0.19
TUBA1A-204ENST00000547939 PNISRQ8TF01 805 aaKnown RBP13.84□□□□□ -0.19
TUBA1A-204ENST00000547939 MYBBP1AQ9BQG0 1328 aaKnown RBP13.84□□□□□ -0.19
TUBA1A-204ENST00000547939 DLEC1Q9Y238 1755 aa13.83□□□□□ -0.19
TUBA1A-204ENST00000547939 ADAMTS7Q9UKP4 1686 aa13.83□□□□□ -0.2
TUBA1A-204ENST00000547939 KCNQ3O43525 872 aa13.83□□□□□ -0.2
TUBA1A-204ENST00000547939 PLEKHF1Q96S99 279 aa13.83□□□□□ -0.2
TUBA1A-204ENST00000547939 PRDM10Q9NQV6 1147 aa13.83□□□□□ -0.2
TUBA1A-204ENST00000547939 POLRMTO00411 1230 aaKnown RBP13.82□□□□□ -0.2
TUBA1A-204ENST00000547939 A1BGP04217 495 aa13.82□□□□□ -0.2
TUBA1A-204ENST00000547939 DDR1Q08345 913 aa13.82□□□□□ -0.2
TUBA1A-204ENST00000547939 NFIXQ14938 502 aa13.82□□□□□ -0.2
TUBA1A-204ENST00000547939 RNF181Q9P0P0 153 aa13.82□□□□□ -0.2
TUBA1A-204ENST00000547939 AFDNP55196 1824 aaKnown RBP13.81□□□□□ -0.2
TUBA1A-204ENST00000547939 PIM2Q9P1W9 311 aa13.81□□□□□ -0.2
TUBA1A-204ENST00000547939 USP16Q9Y5T5 823 aa13.81□□□□□ -0.2
TUBA1A-204ENST00000547939 POTECB2RU33 542 aa13.8□□□□□ -0.2
TUBA1A-204ENST00000547939 SERPINB2P05120 415 aa13.8□□□□□ -0.2
TUBA1A-204ENST00000547939 WDR43Q15061 677 aaKnown RBP eCLIP13.8□□□□□ -0.2
TUBA1A-204ENST00000547939 BICDL1Q6ZP65 573 aa13.8□□□□□ -0.2
TUBA1A-204ENST00000547939 TBC1D2BQ9UPU7 963 aa13.8□□□□□ -0.2
TUBA1A-204ENST00000547939 TJP1Q07157 1748 aa13.8□□□□□ -0.2
TUBA1A-204ENST00000547939 RIPK4P57078 832 aa13.79□□□□□ -0.2
TUBA1A-204ENST00000547939 LMOD3Q0VAK6 560 aa13.79□□□□□ -0.2
TUBA1A-204ENST00000547939 DALRD3Q5D0E6 543 aaKnown RBP13.79□□□□□ -0.2
TUBA1A-204ENST00000547939 ABHD8Q96I13 439 aa13.79□□□□□ -0.2
TUBA1A-204ENST00000547939 BCL2L12Q9HB09 334 aa13.79□□□□□ -0.2
TUBA1A-204ENST00000547939 MIS18AQ9NYP9 233 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms