RNA–Protein interactions for RNA: ENST00000547823.1

DEPDC4-204, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 320 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-204ENST00000547823 DNAAF2Q9NVR5 837 aaKnown RBP5.97□□□□□ -1.45
DEPDC4-204ENST00000547823 ZDHHC3Q9NYG2 299 aa5.97□□□□□ -1.45
DEPDC4-204ENST00000547823 GPR37L1O60883 481 aa5.96□□□□□ -1.46
DEPDC4-204ENST00000547823 FAM157BP0CG42 384 aa5.96□□□□□ -1.46
DEPDC4-204ENST00000547823 PRRT3Q5FWE3 981 aa5.96□□□□□ -1.46
DEPDC4-204ENST00000547823 ZMYM1Q5SVZ6 1142 aa5.96□□□□□ -1.46
DEPDC4-204ENST00000547823 CDCA7Q9BWT1 371 aaPredicted RBP5.96□□□□□ -1.46
DEPDC4-204ENST00000547823 SEMA6BQ9H3T3 888 aa5.96□□□□□ -1.46
DEPDC4-204ENST00000547823 INHAP05111 366 aa5.95□□□□□ -1.46
DEPDC4-204ENST00000547823 ATP4AP20648 1035 aa5.95□□□□□ -1.46
DEPDC4-204ENST00000547823 ALAS2P22557 587 aa5.95□□□□□ -1.46
DEPDC4-204ENST00000547823 MAP7D1Q3KQU3 841 aa5.95□□□□□ -1.46
DEPDC4-204ENST00000547823 SAMD5Q5TGI4 173 aa5.95□□□□□ -1.46
DEPDC4-204ENST00000547823 ZNF468Q5VIY5 522 aaPredicted RBP5.95□□□□□ -1.46
DEPDC4-204ENST00000547823 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.94□□□□□ -1.46
DEPDC4-204ENST00000547823 APBA3O96018 575 aa5.94□□□□□ -1.46
DEPDC4-204ENST00000547823 MAPTP10636 758 aaKnown RBP5.94□□□□□ -1.46
DEPDC4-204ENST00000547823 TNP2Q05952 138 aa5.94□□□□□ -1.46
DEPDC4-204ENST00000547823 ARSJQ5FYB0 599 aaPredicted RBP5.94□□□□□ -1.46
DEPDC4-204ENST00000547823 NACC1Q96RE7 527 aa5.94□□□□□ -1.46
DEPDC4-204ENST00000547823 CHIC2Q9UKJ5 165 aa5.94□□□□□ -1.46
DEPDC4-204ENST00000547823 PRR12Q9ULL5 1215 aa5.94□□□□□ -1.46
DEPDC4-204ENST00000547823 GJA3Q9Y6H8 435 aa5.94□□□□□ -1.46
DEPDC4-204ENST00000547823 A0A1W2PNR3 127 aa5.93□□□□□ -1.46
DEPDC4-204ENST00000547823 KHNYNO15037 678 aaKnown RBP5.93□□□□□ -1.46
DEPDC4-204ENST00000547823 SMTNP53814 917 aa5.93□□□□□ -1.46
DEPDC4-204ENST00000547823 GDF10P55107 478 aa5.93□□□□□ -1.46
DEPDC4-204ENST00000547823 DOC2BQ14184 412 aa5.93□□□□□ -1.46
DEPDC4-204ENST00000547823 FCHSD1Q86WN1 690 aa5.93□□□□□ -1.46
DEPDC4-204ENST00000547823 PHTF2Q8N3S3 785 aa5.93□□□□□ -1.46
DEPDC4-204ENST00000547823 AIDAQ96BJ3 306 aa5.93□□□□□ -1.46
DEPDC4-204ENST00000547823 ELOA3CA0A087WX78 387 aaPredicted RBP5.92□□□□□ -1.46
DEPDC4-204ENST00000547823 DCDC2BA2VCK2 349 aa5.92□□□□□ -1.46
DEPDC4-204ENST00000547823 ELOA3DA6NLF2 546 aaPredicted RBP5.92□□□□□ -1.46
DEPDC4-204ENST00000547823 ELOA3BQ3SY89 546 aa5.92□□□□□ -1.46
DEPDC4-204ENST00000547823 OXLD1Q5BKU9 147 aa5.92□□□□□ -1.46
DEPDC4-204ENST00000547823 ELOA3Q8NG57 546 aa5.92□□□□□ -1.46
DEPDC4-204ENST00000547823 PLVAPQ9BX97 442 aa5.92□□□□□ -1.46
DEPDC4-204ENST00000547823 MARK1Q9P0L2 795 aa5.92□□□□□ -1.46
DEPDC4-204ENST00000547823 GPC6Q9Y625 555 aaPredicted RBP5.92□□□□□ -1.46
DEPDC4-204ENST00000547823 CDK2AP1O14519 115 aa5.91□□□□□ -1.46
DEPDC4-204ENST00000547823 CD33P20138 364 aa5.91□□□□□ -1.46
DEPDC4-204ENST00000547823 SCNN1DP51172 638 aa5.91□□□□□ -1.46
DEPDC4-204ENST00000547823 NEUROD2Q15784 382 aa5.91□□□□□ -1.46
DEPDC4-204ENST00000547823 TRIM11Q96F44 468 aa5.91□□□□□ -1.46
DEPDC4-204ENST00000547823 SCO2A0A1W2PP80 73 aa5.9□□□□□ -1.46
DEPDC4-204ENST00000547823 SOX11P35716 441 aa5.9□□□□□ -1.46
DEPDC4-204ENST00000547823 NEUROD1Q13562 356 aa5.9□□□□□ -1.46
DEPDC4-204ENST00000547823 MTFR1Q15390 333 aa5.9□□□□□ -1.46
DEPDC4-204ENST00000547823 BCANQ96GW7 911 aa5.9□□□□□ -1.46
DEPDC4-204ENST00000547823 SLC4A9Q96Q91 983 aa5.9□□□□□ -1.46
DEPDC4-204ENST00000547823 KRTAP9-2Q9BYQ4 174 aa5.9□□□□□ -1.46
DEPDC4-204ENST00000547823 PRDM6Q9NQX0 595 aa5.9□□□□□ -1.46
DEPDC4-204ENST00000547823 A6NJY4 79 aa5.89□□□□□ -1.47
DEPDC4-204ENST00000547823 BACH1O14867 736 aa5.89□□□□□ -1.47
DEPDC4-204ENST00000547823 EFSO43281 561 aa5.89□□□□□ -1.47
DEPDC4-204ENST00000547823 SIN3BO75182 1162 aa5.89□□□□□ -1.47
DEPDC4-204ENST00000547823 ITGB7P26010 798 aa5.89□□□□□ -1.47
DEPDC4-204ENST00000547823 IL27Q8NEV9 243 aa5.89□□□□□ -1.47
DEPDC4-204ENST00000547823 KLF15Q9UIH9 416 aa5.89□□□□□ -1.47
DEPDC4-204ENST00000547823 KRTAP9-6A0A140TA67 174 aa5.88□□□□□ -1.47
DEPDC4-204ENST00000547823 ADARB2-AS1A8MUL3 147 aa5.88□□□□□ -1.47
DEPDC4-204ENST00000547823 PCBP4P57723 403 aaKnown RBP5.88□□□□□ -1.47
DEPDC4-204ENST00000547823 RSPO4Q2I0M5 234 aaPredicted RBP5.88□□□□□ -1.47
DEPDC4-204ENST00000547823 WASHC4Q2M389 1173 aa5.88□□□□□ -1.47
DEPDC4-204ENST00000547823 NKAPLQ5M9Q1 402 aa5.88□□□□□ -1.47
DEPDC4-204ENST00000547823 BICDL1Q6ZP65 573 aa5.88□□□□□ -1.47
DEPDC4-204ENST00000547823 ZIC5Q96T25 663 aa5.88□□□□□ -1.47
DEPDC4-204ENST00000547823 ZNF295-AS1Q8N0V1 137 aa5.87□□□□□ -1.47
DEPDC4-204ENST00000547823 PLPP7Q8NBV4 271 aa5.87□□□□□ -1.47
DEPDC4-204ENST00000547823 ZFP64Q9NPA5 681 aa5.87□□□□□ -1.47
DEPDC4-204ENST00000547823 SNRKQ9NRH2 765 aa5.87□□□□□ -1.47
DEPDC4-204ENST00000547823 CABP1Q9NZU7 370 aa5.87□□□□□ -1.47
DEPDC4-204ENST00000547823 IQSEC3Q9UPP2 1182 aaPredicted RBP5.87□□□□□ -1.47
DEPDC4-204ENST00000547823 DYRK3O43781 588 aa5.86□□□□□ -1.47
DEPDC4-204ENST00000547823 LZTS3O60299 673 aaPredicted RBP5.86□□□□□ -1.47
DEPDC4-204ENST00000547823 TRIM28Q13263 835 aaKnown RBP5.86□□□□□ -1.47
DEPDC4-204ENST00000547823 ARTNQ5T4W7 220 aa5.86□□□□□ -1.47
DEPDC4-204ENST00000547823 SYT9Q86SS6 491 aa5.86□□□□□ -1.47
DEPDC4-204ENST00000547823 TNFRSF25Q93038 417 aa5.86□□□□□ -1.47
DEPDC4-204ENST00000547823 MDFIQ99750 246 aa5.86□□□□□ -1.47
DEPDC4-204ENST00000547823 NEUROD4Q9HD90 331 aa5.86□□□□□ -1.47
DEPDC4-204ENST00000547823 TBC1D2BQ9UPU7 963 aa5.86□□□□□ -1.47
DEPDC4-204ENST00000547823 STAU1O95793 577 aaKnown RBP5.85□□□□□ -1.47
DEPDC4-204ENST00000547823 TSGA10IPQ3SY00 556 aa5.85□□□□□ -1.47
DEPDC4-204ENST00000547823 NBPF11Q86T75 865 aa5.85□□□□□ -1.47
DEPDC4-204ENST00000547823 TPSG1Q9NRR2 321 aa5.85□□□□□ -1.47
DEPDC4-204ENST00000547823 TMEM229AB2RXF0 380 aa5.84□□□□□ -1.47
DEPDC4-204ENST00000547823 C9orf172C9J069 976 aa5.84□□□□□ -1.47
DEPDC4-204ENST00000547823 H2AFB1P0C5Y9 115 aa5.84□□□□□ -1.47
DEPDC4-204ENST00000547823 H2AFB2P0C5Z0 115 aa5.84□□□□□ -1.47
DEPDC4-204ENST00000547823 SEMA3FQ13275 785 aa5.84□□□□□ -1.47
DEPDC4-204ENST00000547823 KRTAP1-3Q8IUG1 177 aa5.84□□□□□ -1.47
DEPDC4-204ENST00000547823 SERTAD1Q9UHV2 236 aa5.84□□□□□ -1.47
DEPDC4-204ENST00000547823 M0R082 166 aa5.83□□□□□ -1.48
DEPDC4-204ENST00000547823 IRF5Q13568 498 aa5.83□□□□□ -1.48
DEPDC4-204ENST00000547823 TEAD4Q15561 434 aa5.83□□□□□ -1.48
DEPDC4-204ENST00000547823 EML3Q32P44 896 aa5.83□□□□□ -1.48
DEPDC4-204ENST00000547823 ZNF417Q8TAU3 575 aa5.83□□□□□ -1.48
DEPDC4-204ENST00000547823 ZNF587Q96SQ5 575 aaPredicted RBP5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms