RNA–Protein interactions for RNA: ENST00000547637.1

SMARCD1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 2

Gene SMARCD1, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-204ENST00000547637 BRCA1P38398 1863 aaKnown RBP31.04■■■□□ 2.56
SMARCD1-204ENST00000547637 VIRMAQ69YN4 1812 aaKnown RBP31.03■■■□□ 2.56
SMARCD1-204ENST00000547637 CNGB1Q14028 1251 aaPredicted RBP31.03■■■□□ 2.56
SMARCD1-204ENST00000547637 C9orf131Q5VYM1 1079 aa31.03■■■□□ 2.56
SMARCD1-204ENST00000547637 COL15A1P39059 1388 aa31.03■■■□□ 2.56
SMARCD1-204ENST00000547637 ARFGEF1Q9Y6D6 1849 aa31.03■■■□□ 2.56
SMARCD1-204ENST00000547637 A0A087WZG4 1122 aa31.02■■■□□ 2.56
SMARCD1-204ENST00000547637 GNAT3A8MTJ3 354 aa31.02■■■□□ 2.56
SMARCD1-204ENST00000547637 TEX13AQ9BXU3 409 aaPredicted RBP31.02■■■□□ 2.56
SMARCD1-204ENST00000547637 ZBTB1Q9Y2K1 713 aa31.02■■■□□ 2.56
SMARCD1-204ENST00000547637 NPM2Q86SE8 214 aaKnown RBP31.01■■■□□ 2.55
SMARCD1-204ENST00000547637 CANXP27824 592 aaKnown RBP31■■■□□ 2.55
SMARCD1-204ENST00000547637 CHRNA5P30532 468 aa31■■■□□ 2.55
SMARCD1-204ENST00000547637 C16orf71Q8IYS4 520 aaPredicted RBP31■■■□□ 2.55
SMARCD1-204ENST00000547637 CFAP53Q96M91 514 aa31■■■□□ 2.55
SMARCD1-204ENST00000547637 NFIXQ14938 502 aa30.99■■■□□ 2.55
SMARCD1-204ENST00000547637 KDM2BQ8NHM5 1336 aa30.98■■■□□ 2.55
SMARCD1-204ENST00000547637 APLP1P51693 650 aa30.97■■■□□ 2.55
SMARCD1-204ENST00000547637 KCPQ6ZWJ8 1503 aa30.97■■■□□ 2.55
SMARCD1-204ENST00000547637 SERPINB2P05120 415 aa30.96■■■□□ 2.55
SMARCD1-204ENST00000547637 RNF181Q9P0P0 153 aa30.96■■■□□ 2.55
SMARCD1-204ENST00000547637 ADAMTS7Q9UKP4 1686 aa30.95■■■□□ 2.55
SMARCD1-204ENST00000547637 ZNF790Q6PG37 636 aa30.95■■■□□ 2.55
SMARCD1-204ENST00000547637 NUDCQ9Y266 331 aa30.95■■■□□ 2.55
SMARCD1-204ENST00000547637 NMRK2Q9NPI5 230 aa30.94■■■□□ 2.54
SMARCD1-204ENST00000547637 EIF5P55010 431 aaKnown RBP30.92■■■□□ 2.54
SMARCD1-204ENST00000547637 IL17REQ8NFR9 667 aa30.92■■■□□ 2.54
SMARCD1-204ENST00000547637 H0YIN7 160 aa30.91■■■□□ 2.54
SMARCD1-204ENST00000547637 ZNF496Q96IT1 587 aaPredicted RBP30.91■■■□□ 2.54
SMARCD1-204ENST00000547637 FMNL2Q96PY5 1086 aa30.91■■■□□ 2.54
SMARCD1-204ENST00000547637 HEG1Q9ULI3 1381 aa30.91■■■□□ 2.54
SMARCD1-204ENST00000547637 TTLL6Q8N841 843 aa30.9■■■□□ 2.54
SMARCD1-204ENST00000547637 RBM46Q8TBY0 533 aaKnown RBP30.9■■■□□ 2.54
SMARCD1-204ENST00000547637 BCL2L12Q9HB09 334 aa30.9■■■□□ 2.54
SMARCD1-204ENST00000547637 PDZRN3Q9UPQ7 1066 aa30.9■■■□□ 2.54
SMARCD1-204ENST00000547637 ZNF330Q9Y3S2 320 aaPredicted RBP30.9■■■□□ 2.54
SMARCD1-204ENST00000547637 BICDL1Q6ZP65 573 aa30.89■■■□□ 2.54
SMARCD1-204ENST00000547637 UBR2Q8IWV8 1755 aa30.89■■■□□ 2.54
SMARCD1-204ENST00000547637 C2CD5Q86YS7 1000 aa30.88■■■□□ 2.53
SMARCD1-204ENST00000547637 COL3A1P02461 1466 aaPredicted RBP30.88■■■□□ 2.53
SMARCD1-204ENST00000547637 AFDNP55196 1824 aaKnown RBP30.87■■■□□ 2.53
SMARCD1-204ENST00000547637 IL6STP40189 918 aaPredicted RBP30.87■■■□□ 2.53
SMARCD1-204ENST00000547637 ZC3H4Q9UPT8 1303 aaKnown RBP30.87■■■□□ 2.53
SMARCD1-204ENST00000547637 BTBD11A6QL63 1104 aa30.86■■■□□ 2.53
SMARCD1-204ENST00000547637 PRKAR2BP31323 418 aa30.86■■■□□ 2.53
SMARCD1-204ENST00000547637 RTF1Q92541 710 aaKnown RBP30.86■■■□□ 2.53
SMARCD1-204ENST00000547637 CEP350Q5VT06 3117 aa30.86■■■□□ 2.53
SMARCD1-204ENST00000547637 NPHP1O15259 732 aa30.84■■■□□ 2.53
SMARCD1-204ENST00000547637 PDE6BP35913 854 aa30.84■■■□□ 2.53
SMARCD1-204ENST00000547637 FSTL1Q12841 308 aa30.84■■■□□ 2.53
SMARCD1-204ENST00000547637 NRXN2Q9P2S2 1712 aa30.84■■■□□ 2.53
SMARCD1-204ENST00000547637 LMNB1P20700 586 aa30.83■■■□□ 2.53
SMARCD1-204ENST00000547637 IFFO2Q5TF58 517 aa30.83■■■□□ 2.53
SMARCD1-204ENST00000547637 RRAGCQ9HB90 399 aa30.83■■■□□ 2.53
SMARCD1-204ENST00000547637 TBC1D2BQ9UPU7 963 aa30.83■■■□□ 2.53
SMARCD1-204ENST00000547637 SBF1O95248 1867 aa30.82■■■□□ 2.53
SMARCD1-204ENST00000547637 CEMIPQ8WUJ3 1361 aa30.81■■■□□ 2.52
SMARCD1-204ENST00000547637 U2AF1L5P0DN76 240 aaPredicted RBP30.81■■■□□ 2.52
SMARCD1-204ENST00000547637 U2AF1Q01081 240 aaKnown RBP eCLIP30.81■■■□□ 2.52
SMARCD1-204ENST00000547637 TBC1D9BQ66K14 1250 aa30.81■■■□□ 2.52
SMARCD1-204ENST00000547637 SETDB2Q96T68 719 aa30.81■■■□□ 2.52
SMARCD1-204ENST00000547637 BRIP1Q9BX63 1249 aa30.81■■■□□ 2.52
SMARCD1-204ENST00000547637 ZNF622Q969S3 477 aaKnown RBP eCLIP30.8■■■□□ 2.52
SMARCD1-204ENST00000547637 PHACTR3Q96KR7 559 aa30.8■■■□□ 2.52
SMARCD1-204ENST00000547637 RSPH6AQ9H0K4 717 aa30.8■■■□□ 2.52
SMARCD1-204ENST00000547637 CARMIL3Q8ND23 1372 aa30.79■■■□□ 2.52
SMARCD1-204ENST00000547637 RASSF7Q02833 373 aa30.79■■■□□ 2.52
SMARCD1-204ENST00000547637 A1BGP04217 495 aa30.78■■■□□ 2.52
SMARCD1-204ENST00000547637 NEFMP07197 916 aa30.76■■■□□ 2.51
SMARCD1-204ENST00000547637 ST5P78524 1137 aa30.76■■■□□ 2.51
SMARCD1-204ENST00000547637 SIPA1L3O60292 1781 aaPredicted RBP30.76■■■□□ 2.51
SMARCD1-204ENST00000547637 DLEC1Q9Y238 1755 aa30.76■■■□□ 2.51
SMARCD1-204ENST00000547637 GLTPD2A6NH11 291 aa30.75■■■□□ 2.51
SMARCD1-204ENST00000547637 DZIP3Q86Y13 1208 aaKnown RBP30.75■■■□□ 2.51
SMARCD1-204ENST00000547637 SMC1BQ8NDV3 1235 aa30.75■■■□□ 2.51
SMARCD1-204ENST00000547637 SNRPA1P09661 255 aaKnown RBP30.74■■■□□ 2.51
SMARCD1-204ENST00000547637 PPP2R1AP30153 589 aa30.74■■■□□ 2.51
SMARCD1-204ENST00000547637 PRR5LQ6MZQ0 368 aa30.74■■■□□ 2.51
SMARCD1-204ENST00000547637 DPY19L2Q6NUT2 758 aa30.74■■■□□ 2.51
SMARCD1-204ENST00000547637 CNBD1Q8NA66 436 aa30.74■■■□□ 2.51
SMARCD1-204ENST00000547637 TNRC6CQ9HCJ0 1690 aaKnown RBP30.74■■■□□ 2.51
SMARCD1-204ENST00000547637 HTATSF1O43719 755 aaKnown RBP30.73■■■□□ 2.51
SMARCD1-204ENST00000547637 VEGFAP15692 232 aaPredicted RBP30.73■■■□□ 2.51
SMARCD1-204ENST00000547637 CNKSR1Q969H4 720 aa30.73■■■□□ 2.51
SMARCD1-204ENST00000547637 ZNF652Q9Y2D9 606 aa30.73■■■□□ 2.51
SMARCD1-204ENST00000547637 KCNQ3O43525 872 aa30.71■■■□□ 2.51
SMARCD1-204ENST00000547637 CAMTA2O94983 1202 aa30.71■■■□□ 2.51
SMARCD1-204ENST00000547637 CLEC4GQ6UXB4 293 aa30.71■■■□□ 2.51
SMARCD1-204ENST00000547637 DNAJC5GQ8N7S2 189 aa30.71■■■□□ 2.51
SMARCD1-204ENST00000547637 USP16Q9Y5T5 823 aa30.71■■■□□ 2.51
SMARCD1-204ENST00000547637 SCN7AQ01118 1682 aa30.69■■■□□ 2.5
SMARCD1-204ENST00000547637 SOGA3Q5TF21 947 aa30.69■■■□□ 2.5
SMARCD1-204ENST00000547637 MCM10Q7L590 875 aa30.69■■■□□ 2.5
SMARCD1-204ENST00000547637 C21orf2O43822 256 aa30.68■■■□□ 2.5
SMARCD1-204ENST00000547637 STYK1Q6J9G0 422 aa30.67■■■□□ 2.5
SMARCD1-204ENST00000547637 CCDC24Q8N4L8 307 aa30.67■■■□□ 2.5
SMARCD1-204ENST00000547637 ZNF219Q9P2Y4 722 aaPredicted RBP30.67■■■□□ 2.5
SMARCD1-204ENST00000547637 CCDC88AQ3V6T2 1871 aa30.67■■■□□ 2.5
SMARCD1-204ENST00000547637 NFKBIEO00221 500 aa30.66■■■□□ 2.5
SMARCD1-204ENST00000547637 NBPF5PQ86XG9 351 aaPredicted RBP30.66■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms