RNA–Protein interactions for RNA: ENST00000547369.5

GCN1-203, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-203ENST00000547369 COL15A1P39059 1388 aa25.06■■□□□ 1.6
GCN1-203ENST00000547369 GNAT3A8MTJ3 354 aa25.06■■□□□ 1.6
GCN1-203ENST00000547369 TTC5Q8N0Z6 440 aa25.06■■□□□ 1.6
GCN1-203ENST00000547369 PIM2Q9P1W9 311 aa25.06■■□□□ 1.6
GCN1-203ENST00000547369 NARFQ9UHQ1 456 aa25.06■■□□□ 1.6
GCN1-203ENST00000547369 TEFQ10587 303 aa25.05■■□□□ 1.6
GCN1-203ENST00000547369 IL17REQ8NFR9 667 aa25.05■■□□□ 1.6
GCN1-203ENST00000547369 CFAP53Q96M91 514 aa25.03■■□□□ 1.6
GCN1-203ENST00000547369 SIPA1L3O60292 1781 aaPredicted RBP25.03■■□□□ 1.6
GCN1-203ENST00000547369 STARD3NLO95772 234 aa25.02■■□□□ 1.6
GCN1-203ENST00000547369 CANXP27824 592 aaKnown RBP25.02■■□□□ 1.6
GCN1-203ENST00000547369 CHRNA5P30532 468 aa25.02■■□□□ 1.6
GCN1-203ENST00000547369 NFIXQ14938 502 aa25.02■■□□□ 1.6
GCN1-203ENST00000547369 DALRD3Q5D0E6 543 aaKnown RBP25.02■■□□□ 1.6
GCN1-203ENST00000547369 AFDNP55196 1824 aaKnown RBP25.02■■□□□ 1.6
GCN1-203ENST00000547369 KIF3CO14782 793 aa25.01■■□□□ 1.59
GCN1-203ENST00000547369 ZNF790Q6PG37 636 aa25.01■■□□□ 1.59
GCN1-203ENST00000547369 ZNF496Q96IT1 587 aaPredicted RBP25.01■■□□□ 1.59
GCN1-203ENST00000547369 BCL2L12Q9HB09 334 aa25.01■■□□□ 1.59
GCN1-203ENST00000547369 PRKAR2BP31323 418 aa25■■□□□ 1.59
GCN1-203ENST00000547369 HEG1Q9ULI3 1381 aa25■■□□□ 1.59
GCN1-203ENST00000547369 PHACTR3Q96KR7 559 aa24.99■■□□□ 1.59
GCN1-203ENST00000547369 RSPH6AQ9H0K4 717 aa24.99■■□□□ 1.59
GCN1-203ENST00000547369 NRXN2Q9P2S2 1712 aa24.99■■□□□ 1.59
GCN1-203ENST00000547369 EIF5P55010 431 aaKnown RBP24.98■■□□□ 1.59
GCN1-203ENST00000547369 TEX13AQ9BXU3 409 aaPredicted RBP24.98■■□□□ 1.59
GCN1-203ENST00000547369 NUDCQ9Y266 331 aa24.98■■□□□ 1.59
GCN1-203ENST00000547369 CEMIPQ8WUJ3 1361 aa24.97■■□□□ 1.59
GCN1-203ENST00000547369 A0A087WZG4 1122 aa24.96■■□□□ 1.59
GCN1-203ENST00000547369 SERPINB2P05120 415 aa24.96■■□□□ 1.59
GCN1-203ENST00000547369 HSPA6P17066 643 aa24.96■■□□□ 1.59
GCN1-203ENST00000547369 PPP2R1AP30153 589 aa24.96■■□□□ 1.59
GCN1-203ENST00000547369 C9orf131Q5VYM1 1079 aa24.96■■□□□ 1.59
GCN1-203ENST00000547369 FMNL2Q96PY5 1086 aa24.95■■□□□ 1.58
GCN1-203ENST00000547369 U2AF1L5P0DN76 240 aaPredicted RBP24.93■■□□□ 1.58
GCN1-203ENST00000547369 U2AF1Q01081 240 aaKnown RBP eCLIP24.93■■□□□ 1.58
GCN1-203ENST00000547369 BTBD11A6QL63 1104 aa24.92■■□□□ 1.58
GCN1-203ENST00000547369 BICDL1Q6ZP65 573 aa24.92■■□□□ 1.58
GCN1-203ENST00000547369 CEP350Q5VT06 3117 aa24.91■■□□□ 1.58
GCN1-203ENST00000547369 DLEC1Q9Y238 1755 aa24.91■■□□□ 1.58
GCN1-203ENST00000547369 KCNQ3O43525 872 aa24.91■■□□□ 1.58
GCN1-203ENST00000547369 IL6STP40189 918 aaPredicted RBP24.91■■□□□ 1.58
GCN1-203ENST00000547369 ZNF330Q9Y3S2 320 aaPredicted RBP24.91■■□□□ 1.58
GCN1-203ENST00000547369 SBF1O95248 1867 aa24.91■■□□□ 1.58
GCN1-203ENST00000547369 NMRK2Q9NPI5 230 aa24.9■■□□□ 1.58
GCN1-203ENST00000547369 RNF181Q9P0P0 153 aa24.9■■□□□ 1.58
GCN1-203ENST00000547369 TBC1D2BQ9UPU7 963 aa24.9■■□□□ 1.58
GCN1-203ENST00000547369 SCN7AQ01118 1682 aa24.9■■□□□ 1.58
GCN1-203ENST00000547369 TOMM70O94826 608 aa24.89■■□□□ 1.58
GCN1-203ENST00000547369 A1BGP04217 495 aa24.89■■□□□ 1.58
GCN1-203ENST00000547369 TBC1D9BQ66K14 1250 aa24.89■■□□□ 1.58
GCN1-203ENST00000547369 CARMIL3Q8ND23 1372 aa24.89■■□□□ 1.57
GCN1-203ENST00000547369 C2CD5Q86YS7 1000 aa24.88■■□□□ 1.57
GCN1-203ENST00000547369 RTF1Q92541 710 aaKnown RBP24.88■■□□□ 1.57
GCN1-203ENST00000547369 NPM2Q86SE8 214 aaKnown RBP24.87■■□□□ 1.57
GCN1-203ENST00000547369 H0YIN7 160 aa24.86■■□□□ 1.57
GCN1-203ENST00000547369 MCM10Q7L590 875 aa24.86■■□□□ 1.57
GCN1-203ENST00000547369 TTLL6Q8N841 843 aa24.86■■□□□ 1.57
GCN1-203ENST00000547369 ANKRD31Q8N7Z5 1873 aa24.85■■□□□ 1.57
GCN1-203ENST00000547369 RASSF7Q02833 373 aa24.84■■□□□ 1.57
GCN1-203ENST00000547369 USP16Q9Y5T5 823 aa24.84■■□□□ 1.57
GCN1-203ENST00000547369 KDM2BQ8NHM5 1336 aa24.84■■□□□ 1.57
GCN1-203ENST00000547369 HTATSF1O43719 755 aaKnown RBP24.83■■□□□ 1.57
GCN1-203ENST00000547369 CAMTA2O94983 1202 aa24.83■■□□□ 1.57
GCN1-203ENST00000547369 DCTN1Q14203 1278 aa24.82■■□□□ 1.56
GCN1-203ENST00000547369 PRR5LQ6MZQ0 368 aa24.82■■□□□ 1.56
GCN1-203ENST00000547369 DZIP3Q86Y13 1208 aaKnown RBP24.82■■□□□ 1.56
GCN1-203ENST00000547369 BRIP1Q9BX63 1249 aa24.82■■□□□ 1.56
GCN1-203ENST00000547369 PDZRN3Q9UPQ7 1066 aa24.82■■□□□ 1.56
GCN1-203ENST00000547369 BCORQ6W2J9 1755 aa24.81■■□□□ 1.56
GCN1-203ENST00000547369 PRAMEF22A3QJZ6 481 aa24.81■■□□□ 1.56
GCN1-203ENST00000547369 SNRPA1P09661 255 aaKnown RBP24.81■■□□□ 1.56
GCN1-203ENST00000547369 PDE6BP35913 854 aa24.81■■□□□ 1.56
GCN1-203ENST00000547369 SETDB2Q96T68 719 aa24.81■■□□□ 1.56
GCN1-203ENST00000547369 LMNB1P20700 586 aa24.8■■□□□ 1.56
GCN1-203ENST00000547369 PIP4K2AP48426 406 aaPredicted RBP24.8■■□□□ 1.56
GCN1-203ENST00000547369 C16orf71Q8IYS4 520 aaPredicted RBP24.8■■□□□ 1.56
GCN1-203ENST00000547369 CCDC24Q8N4L8 307 aa24.8■■□□□ 1.56
GCN1-203ENST00000547369 RBM46Q8TBY0 533 aaKnown RBP24.8■■□□□ 1.56
GCN1-203ENST00000547369 ZC3H4Q9UPT8 1303 aaKnown RBP24.8■■□□□ 1.56
GCN1-203ENST00000547369 APLP1P51693 650 aa24.79■■□□□ 1.56
GCN1-203ENST00000547369 ZNF622Q969S3 477 aaKnown RBP eCLIP24.79■■□□□ 1.562e-10■■■□□ 15.4
GCN1-203ENST00000547369 CCDC88AQ3V6T2 1871 aa24.79■■□□□ 1.56
GCN1-203ENST00000547369 PRELPP51888 382 aa24.78■■□□□ 1.56
GCN1-203ENST00000547369 CNBD1Q8NA66 436 aa24.78■■□□□ 1.56
GCN1-203ENST00000547369 TNRC6CQ9HCJ0 1690 aaKnown RBP24.78■■□□□ 1.56
GCN1-203ENST00000547369 COL11A2P13942 1736 aaPredicted RBP24.78■■□□□ 1.56
GCN1-203ENST00000547369 NPHP1O15259 732 aa24.77■■□□□ 1.56
GCN1-203ENST00000547369 TAF7Q15545 349 aaPredicted RBP24.77■■□□□ 1.56
GCN1-203ENST00000547369 RRAGCQ9HB90 399 aa24.77■■□□□ 1.56
GCN1-203ENST00000547369 NFKBIEO00221 500 aa24.76■■□□□ 1.55
GCN1-203ENST00000547369 NEFMP07197 916 aa24.76■■□□□ 1.55
GCN1-203ENST00000547369 DLG5Q8TDM6 1919 aa24.75■■□□□ 1.55
GCN1-203ENST00000547369 ST5P78524 1137 aa24.75■■□□□ 1.55
GCN1-203ENST00000547369 CLEC4GQ6UXB4 293 aa24.75■■□□□ 1.55
GCN1-203ENST00000547369 NBPF26B4DH59 902 aa24.73■■□□□ 1.55
GCN1-203ENST00000547369 NBPF10Q6P3W6 841 aaKnown RBP24.73■■□□□ 1.55
GCN1-203ENST00000547369 NBPF15Q8N660 670 aa24.73■■□□□ 1.55
GCN1-203ENST00000547369 ZNF652Q9Y2D9 606 aa24.73■■□□□ 1.55
GCN1-203ENST00000547369 TIAM2Q8IVF5 1701 aa24.72■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms