RNA–Protein interactions for RNA: ENST00000547208.5

BEST3-208, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 1,187 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-208ENST00000547208 C10orf71Q711Q0 1435 aa13.81□□□□□ -0.2
BEST3-208ENST00000547208 ARFGEF1Q9Y6D6 1849 aa13.81□□□□□ -0.2
BEST3-208ENST00000547208 U2AF1L5P0DN76 240 aaPredicted RBP13.81□□□□□ -0.2
BEST3-208ENST00000547208 RFC4P35249 363 aa13.81□□□□□ -0.2
BEST3-208ENST00000547208 U2AF1Q01081 240 aaKnown RBP eCLIP13.81□□□□□ -0.2
BEST3-208ENST00000547208 NLGN1Q8N2Q7 840 aa13.81□□□□□ -0.2
BEST3-208ENST00000547208 NUDCQ9Y266 331 aa13.81□□□□□ -0.2
BEST3-208ENST00000547208 SOS1Q07889 1333 aaPredicted RBP13.81□□□□□ -0.2
BEST3-208ENST00000547208 KDM3BQ7LBC6 1761 aa13.81□□□□□ -0.2
BEST3-208ENST00000547208 PXDNLA1KZ92 1463 aa13.8□□□□□ -0.2
BEST3-208ENST00000547208 FCHSD2O94868 740 aa13.8□□□□□ -0.2
BEST3-208ENST00000547208 VSIG10Q8N0Z9 540 aa13.8□□□□□ -0.2
BEST3-208ENST00000547208 CCDC87Q9NVE4 849 aa13.8□□□□□ -0.2
BEST3-208ENST00000547208 SRP68Q9UHB9 627 aaKnown RBP13.8□□□□□ -0.2
BEST3-208ENST00000547208 BCORQ6W2J9 1755 aa13.8□□□□□ -0.2
BEST3-208ENST00000547208 LAMB4A4D0S4 1761 aa13.79□□□□□ -0.2
BEST3-208ENST00000547208 DLEC1Q9Y238 1755 aa13.79□□□□□ -0.2
BEST3-208ENST00000547208 TEFQ10587 303 aa13.79□□□□□ -0.2
BEST3-208ENST00000547208 ZNF790Q6PG37 636 aa13.79□□□□□ -0.2
BEST3-208ENST00000547208 ZNF496Q96IT1 587 aaPredicted RBP13.79□□□□□ -0.2
BEST3-208ENST00000547208 HEG1Q9ULI3 1381 aa13.79□□□□□ -0.2
BEST3-208ENST00000547208 FKBP8Q14318 412 aa13.78□□□□□ -0.2
BEST3-208ENST00000547208 ZBTB1Q9Y2K1 713 aa13.78□□□□□ -0.2
BEST3-208ENST00000547208 COL15A1P39059 1388 aa13.78□□□□□ -0.2
BEST3-208ENST00000547208 GRIN3BO60391 1043 aa13.77□□□□□ -0.21
BEST3-208ENST00000547208 DDR1Q08345 913 aa13.77□□□□□ -0.21
BEST3-208ENST00000547208 ANKRD31Q8N7Z5 1873 aa13.76□□□□□ -0.21
BEST3-208ENST00000547208 ZBTB22O15209 634 aa13.76□□□□□ -0.21
BEST3-208ENST00000547208 KCNQ3O43525 872 aa13.76□□□□□ -0.21
BEST3-208ENST00000547208 MCM10Q7L590 875 aa13.76□□□□□ -0.21
BEST3-208ENST00000547208 TTC5Q8N0Z6 440 aa13.76□□□□□ -0.21
BEST3-208ENST00000547208 PLEKHF1Q96S99 279 aa13.76□□□□□ -0.21
BEST3-208ENST00000547208 ADCY9O60503 1353 aa13.75□□□□□ -0.21
BEST3-208ENST00000547208 TM4SF1P30408 202 aa13.75□□□□□ -0.21
BEST3-208ENST00000547208 USPL1Q5W0Q7 1092 aa13.75□□□□□ -0.21
BEST3-208ENST00000547208 HSPA6P17066 643 aa13.74□□□□□ -0.21
BEST3-208ENST00000547208 EIF5P55010 431 aaKnown RBP13.74□□□□□ -0.21
BEST3-208ENST00000547208 TGFB2P61812 414 aa13.74□□□□□ -0.21
BEST3-208ENST00000547208 DCTN1Q14203 1278 aa13.74□□□□□ -0.21
BEST3-208ENST00000547208 BCL2L12Q9HB09 334 aa13.74□□□□□ -0.21
BEST3-208ENST00000547208 NARFQ9UHQ1 456 aa13.74□□□□□ -0.21
BEST3-208ENST00000547208 PARP3Q9Y6F1 533 aa13.74□□□□□ -0.21
BEST3-208ENST00000547208 BTBD11A6QL63 1104 aa13.73□□□□□ -0.21
BEST3-208ENST00000547208 POLRMTO00411 1230 aaKnown RBP13.73□□□□□ -0.21
BEST3-208ENST00000547208 KIF3CO14782 793 aa13.73□□□□□ -0.21
BEST3-208ENST00000547208 HTATSF1O43719 755 aaKnown RBP13.73□□□□□ -0.21
BEST3-208ENST00000547208 STARD3NLO95772 234 aa13.73□□□□□ -0.21
BEST3-208ENST00000547208 DDX10Q13206 875 aaKnown RBP13.73□□□□□ -0.21
BEST3-208ENST00000547208 RALBP1Q15311 655 aa13.73□□□□□ -0.21
BEST3-208ENST00000547208 FMNL2Q96PY5 1086 aa13.73□□□□□ -0.21
BEST3-208ENST00000547208 SBF1O95248 1867 aa13.73□□□□□ -0.21
BEST3-208ENST00000547208 A0A0G2JLW4 131 aa13.72□□□□□ -0.21
BEST3-208ENST00000547208 ZPR1O75312 459 aa13.72□□□□□ -0.21
BEST3-208ENST00000547208 KCNA3P22001 575 aa13.72□□□□□ -0.21
BEST3-208ENST00000547208 CANXP27824 592 aaKnown RBP13.72□□□□□ -0.21
BEST3-208ENST00000547208 HTRA3P83110 453 aa13.72□□□□□ -0.21
BEST3-208ENST00000547208 TEX13AQ9BXU3 409 aaPredicted RBP13.72□□□□□ -0.21
BEST3-208ENST00000547208 GPBP1L1Q9HC44 474 aaPredicted RBP13.72□□□□□ -0.21
BEST3-208ENST00000547208 COL11A2P13942 1736 aaPredicted RBP13.71□□□□□ -0.21
BEST3-208ENST00000547208 PRAMEF22A3QJZ6 481 aa13.71□□□□□ -0.21
BEST3-208ENST00000547208 DPEP1P16444 411 aa13.71□□□□□ -0.21
BEST3-208ENST00000547208 NFIXQ14938 502 aa13.71□□□□□ -0.21
BEST3-208ENST00000547208 RTF1Q92541 710 aaKnown RBP13.71□□□□□ -0.21
BEST3-208ENST00000547208 USP16Q9Y5T5 823 aa13.7□□□□□ -0.22
BEST3-208ENST00000547208 CACNA1SQ13698 1873 aa13.7□□□□□ -0.22
BEST3-208ENST00000547208 A1BGP04217 495 aa13.69□□□□□ -0.22
BEST3-208ENST00000547208 IL6STP40189 918 aaPredicted RBP13.69□□□□□ -0.22
BEST3-208ENST00000547208 NFE2L2Q16236 605 aa13.69□□□□□ -0.22
BEST3-208ENST00000547208 CCDC88AQ3V6T2 1871 aa13.69□□□□□ -0.22
BEST3-208ENST00000547208 NUP98P52948 1817 aa13.69□□□□□ -0.22
BEST3-208ENST00000547208 MYBBP1AQ9BQG0 1328 aaKnown RBP13.68□□□□□ -0.22
BEST3-208ENST00000547208 TAF7Q15545 349 aaPredicted RBP13.68□□□□□ -0.22
BEST3-208ENST00000547208 CARMIL3Q8ND23 1372 aa13.68□□□□□ -0.22
BEST3-208ENST00000547208 ARFGEF2Q9Y6D5 1785 aa13.68□□□□□ -0.22
BEST3-208ENST00000547208 A0A087WZG4 1122 aa13.67□□□□□ -0.22
BEST3-208ENST00000547208 SNRPA1P09661 255 aaKnown RBP13.67□□□□□ -0.22
BEST3-208ENST00000547208 DNAJC5GQ8N7S2 189 aa13.67□□□□□ -0.22
BEST3-208ENST00000547208 THUMPD2Q9BTF0 503 aaKnown RBP13.67□□□□□ -0.22
BEST3-208ENST00000547208 MIS18AQ9NYP9 233 aa13.67□□□□□ -0.22
BEST3-208ENST00000547208 TBC1D2BQ9UPU7 963 aa13.67□□□□□ -0.22
BEST3-208ENST00000547208 BCS1LQ9Y276 419 aa13.67□□□□□ -0.22
BEST3-208ENST00000547208 CAMTA2O94983 1202 aa13.66□□□□□ -0.22
BEST3-208ENST00000547208 SERPINB2P05120 415 aa13.66□□□□□ -0.22
BEST3-208ENST00000547208 CHRNA5P30532 468 aa13.66□□□□□ -0.22
BEST3-208ENST00000547208 PIP4K2AP48426 406 aaPredicted RBP13.66□□□□□ -0.22
BEST3-208ENST00000547208 TBC1D9BQ66K14 1250 aa13.66□□□□□ -0.22
BEST3-208ENST00000547208 RNF39Q9H2S5 420 aa13.66□□□□□ -0.22
BEST3-208ENST00000547208 U3KPZ7 1027 aaPredicted RBP13.66□□□□□ -0.22
BEST3-208ENST00000547208 NBPF26B4DH59 902 aa13.65□□□□□ -0.22
BEST3-208ENST00000547208 MYCNP04198 464 aaPredicted RBP13.65□□□□□ -0.22
BEST3-208ENST00000547208 NEFMP07197 916 aa13.65□□□□□ -0.22
BEST3-208ENST00000547208 NBPF10Q6P3W6 841 aaKnown RBP13.65□□□□□ -0.22
BEST3-208ENST00000547208 NBPF15Q8N660 670 aa13.65□□□□□ -0.22
BEST3-208ENST00000547208 PNNQ9H307 717 aaKnown RBP13.65□□□□□ -0.22
BEST3-208ENST00000547208 MAPK8IP3Q9UPT6 1336 aa13.64□□□□□ -0.23
BEST3-208ENST00000547208 FER1L6Q2WGJ9 1857 aa13.64□□□□□ -0.23
BEST3-208ENST00000547208 NMRK2Q9NPI5 230 aa13.64□□□□□ -0.23
BEST3-208ENST00000547208 PIM2Q9P1W9 311 aa13.64□□□□□ -0.23
BEST3-208ENST00000547208 ZNF330Q9Y3S2 320 aaPredicted RBP13.64□□□□□ -0.23
BEST3-208ENST00000547208 BICDL1Q6ZP65 573 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms