RNA–Protein interactions for RNA: ENST00000547065.1

VDR-204, Transcript of vitamin D receptor, humanhuman

TSL 2

Gene VDR, Length 1,782 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-204ENST00000547065 DDX21Q9NR30 783 aaKnown RBP eCLIP23.04■■□□□ 1.28
VDR-204ENST00000547065 SDSP20132 328 aa23.04■■□□□ 1.28
VDR-204ENST00000547065 PDE1AP54750 535 aa23.04■■□□□ 1.28
VDR-204ENST00000547065 RAB11FIP3O75154 756 aa23.03■■□□□ 1.28
VDR-204ENST00000547065 POLA2Q14181 598 aa23.03■■□□□ 1.28
VDR-204ENST00000547065 CASC1Q6TDU7 716 aa23.03■■□□□ 1.28
VDR-204ENST00000547065 PRDM11Q9NQV5 511 aa23.03■■□□□ 1.28
VDR-204ENST00000547065 HDAC5Q9UQL6 1122 aa23.03■■□□□ 1.28
VDR-204ENST00000547065 PRAMEF22A3QJZ6 481 aa23.02■■□□□ 1.28
VDR-204ENST00000547065 CYP27B1O15528 508 aa23.02■■□□□ 1.28
VDR-204ENST00000547065 DDX58O95786 925 aaKnown RBP23.02■■□□□ 1.28
VDR-204ENST00000547065 PROSER3Q2NL68 480 aa23.02■■□□□ 1.28
VDR-204ENST00000547065 SLC39A6Q13433 755 aa23.01■■□□□ 1.27
VDR-204ENST00000547065 PPP1R42Q7Z4L9 355 aa23.01■■□□□ 1.27
VDR-204ENST00000547065 SNX21Q969T3 373 aa23.01■■□□□ 1.27
VDR-204ENST00000547065 MAP3K2Q9Y2U5 619 aa23.01■■□□□ 1.27
VDR-204ENST00000547065 WDR17Q8IZU2 1322 aa23■■□□□ 1.27
VDR-204ENST00000547065 SALL3Q9BXA9 1300 aa23■■□□□ 1.27
VDR-204ENST00000547065 SCN11AQ9UI33 1791 aa23■■□□□ 1.27
VDR-204ENST00000547065 NBPF7P0C2Y1 421 aaPredicted RBP23■■□□□ 1.27
VDR-204ENST00000547065 HSCBQ8IWL3 235 aa23■■□□□ 1.27
VDR-204ENST00000547065 ANTXR1Q9H6X2 564 aa23■■□□□ 1.27
VDR-204ENST00000547065 PDIA6Q15084 440 aa22.99■■□□□ 1.27
VDR-204ENST00000547065 STAP2Q9UGK3 403 aa22.99■■□□□ 1.27
VDR-204ENST00000547065 TTC5Q8N0Z6 440 aa22.98■■□□□ 1.27
VDR-204ENST00000547065 MRC1P22897 1456 aa22.97■■□□□ 1.27
VDR-204ENST00000547065 SNRPA1P09661 255 aaKnown RBP22.97■■□□□ 1.27
VDR-204ENST00000547065 TOM1L2Q6ZVM7 507 aa22.97■■□□□ 1.27
VDR-204ENST00000547065 KIF2CQ99661 725 aa22.97■■□□□ 1.27
VDR-204ENST00000547065 SRGAP3O43295 1099 aa22.96■■□□□ 1.27
VDR-204ENST00000547065 SURF6O75683 361 aaKnown RBP22.96■■□□□ 1.27
VDR-204ENST00000547065 MX1P20591 662 aa22.96■■□□□ 1.27
VDR-204ENST00000547065 CABP4P57796 275 aa22.96■■□□□ 1.27
VDR-204ENST00000547065 LINS1Q8NG48 757 aa22.96■■□□□ 1.27
VDR-204ENST00000547065 ZNF496Q96IT1 587 aaPredicted RBP22.96■■□□□ 1.27
VDR-204ENST00000547065 SLKQ9H2G2 1235 aaPredicted RBP22.96■■□□□ 1.27
VDR-204ENST00000547065 C9orf78Q9NZ63 289 aaPredicted RBP22.96■■□□□ 1.27
VDR-204ENST00000547065 PKD1L3Q7Z443 1732 aa22.96■■□□□ 1.27
VDR-204ENST00000547065 HSP90AB4PQ58FF6 505 aa22.96■■□□□ 1.27
VDR-204ENST00000547065 ZCRB1Q8TBF4 217 aaKnown RBP22.96■■□□□ 1.27
VDR-204ENST00000547065 FMNL2Q96PY5 1086 aa22.96■■□□□ 1.27
VDR-204ENST00000547065 MTX1Q13505 466 aa22.95■■□□□ 1.26
VDR-204ENST00000547065 USP26Q9BXU7 913 aa22.95■■□□□ 1.26
VDR-204ENST00000547065 AOX1Q06278 1338 aa22.95■■□□□ 1.26
VDR-204ENST00000547065 LARP1Q6PKG0 1096 aaKnown RBP22.94■■□□□ 1.26
VDR-204ENST00000547065 CARD10Q9BWT7 1032 aa22.94■■□□□ 1.26
VDR-204ENST00000547065 DEKP35659 375 aaKnown RBP22.94■■□□□ 1.26
VDR-204ENST00000547065 AIMP1Q12904 312 aaKnown RBP22.93■■□□□ 1.26
VDR-204ENST00000547065 KIF1BPQ96EK5 621 aa22.93■■□□□ 1.26
VDR-204ENST00000547065 PCDH11XQ9BZA7 1347 aa22.93■■□□□ 1.26
VDR-204ENST00000547065 PCDH11YQ9BZA8 1340 aa22.93■■□□□ 1.26
VDR-204ENST00000547065 RIC3Q7Z5B4 369 aa22.92■■□□□ 1.26
VDR-204ENST00000547065 RHPN1Q8TCX5 695 aa22.92■■□□□ 1.26
VDR-204ENST00000547065 UTYO14607 1347 aa22.92■■□□□ 1.26
VDR-204ENST00000547065 COL5A2P05997 1499 aaPredicted RBP22.92■■□□□ 1.26
VDR-204ENST00000547065 REC8O95072 547 aa22.91■■□□□ 1.26
VDR-204ENST00000547065 ERVV-2B6SEH9 535 aa22.91■■□□□ 1.26
VDR-204ENST00000547065 ERC2O15083 957 aa22.91■■□□□ 1.26
VDR-204ENST00000547065 GRM8O00222 908 aa22.9■■□□□ 1.26
VDR-204ENST00000547065 FRAT2O75474 233 aaPredicted RBP22.9■■□□□ 1.26
VDR-204ENST00000547065 IL2RBP14784 551 aa22.9■■□□□ 1.26
VDR-204ENST00000547065 CWF19L2Q2TBE0 894 aaKnown RBP22.9■■□□□ 1.26
VDR-204ENST00000547065 XAGE3Q8WTP9 111 aa22.9■■□□□ 1.26
VDR-204ENST00000547065 USP16Q9Y5T5 823 aa22.9■■□□□ 1.26
VDR-204ENST00000547065 MYL6BP14649 208 aa22.89■■□□□ 1.26
VDR-204ENST00000547065 EVA1CP58658 441 aa22.89■■□□□ 1.26
VDR-204ENST00000547065 NEXNQ0ZGT2 675 aa22.89■■□□□ 1.26
VDR-204ENST00000547065 NKX1-1Q15270 411 aaPredicted RBP22.89■■□□□ 1.26
VDR-204ENST00000547065 COPS6Q7L5N1 327 aa22.89■■□□□ 1.26
VDR-204ENST00000547065 IL1RAPL2Q9NP60 686 aa22.89■■□□□ 1.25
VDR-204ENST00000547065 CHMP5Q9NZZ3 219 aa22.89■■□□□ 1.25
VDR-204ENST00000547065 RABEP1Q15276 862 aa22.88■■□□□ 1.25
VDR-204ENST00000547065 SPRYD3Q8NCJ5 442 aa22.88■■□□□ 1.25
VDR-204ENST00000547065 METTL22Q9BUU2 404 aaPredicted RBP22.88■■□□□ 1.25
VDR-204ENST00000547065 TSHZ3Q63HK5 1081 aa22.87■■□□□ 1.25
VDR-204ENST00000547065 PARP4Q9UKK3 1724 aaKnown RBP22.87■■□□□ 1.25
VDR-204ENST00000547065 IGKV5-2P06315 115 aa22.86■■□□□ 1.25
VDR-204ENST00000547065 ANKRD13DQ6ZTN6 518 aa22.86■■□□□ 1.25
VDR-204ENST00000547065 LRP10Q7Z4F1 713 aa22.86■■□□□ 1.25
VDR-204ENST00000547065 NUTM1Q86Y26 1132 aa22.86■■□□□ 1.25
VDR-204ENST00000547065 C5P01031 1676 aa22.86■■□□□ 1.25
VDR-204ENST00000547065 TRIM6-TRIM34B2RNG4 842 aa22.85■■□□□ 1.25
VDR-204ENST00000547065 ERC1Q8IUD2 1116 aa22.85■■□□□ 1.25
VDR-204ENST00000547065 STRN4Q9NRL3 753 aa22.85■■□□□ 1.25
VDR-204ENST00000547065 ERBB4Q15303 1308 aa22.84■■□□□ 1.25
VDR-204ENST00000547065 NEURL1BA8MQ27 555 aa22.84■■□□□ 1.25
VDR-204ENST00000547065 OS9Q13438 667 aaPredicted RBP22.84■■□□□ 1.25
VDR-204ENST00000547065 RILPL2Q969X0 211 aa22.84■■□□□ 1.25
VDR-204ENST00000547065 SUCLG2Q96I99 432 aa22.84■■□□□ 1.25
VDR-204ENST00000547065 NHSL1Q5SYE7 1610 aa22.84■■□□□ 1.25
VDR-204ENST00000547065 CHMLP26374 656 aa22.84■■□□□ 1.25
VDR-204ENST00000547065 ESYT1Q9BSJ8 1104 aa22.84■■□□□ 1.25
VDR-204ENST00000547065 RBM42Q9BTD8 480 aaKnown RBP22.84■■□□□ 1.25
VDR-204ENST00000547065 K7ELQ4 463 aaPredicted RBP22.83■■□□□ 1.24
VDR-204ENST00000547065 GCKRQ14397 625 aa22.83■■□□□ 1.24
VDR-204ENST00000547065 MYD88Q99836 296 aa22.83■■□□□ 1.24
VDR-204ENST00000547065 KAZALD1Q96I82 304 aa22.82■■□□□ 1.24
VDR-204ENST00000547065 ABCA3Q99758 1704 aa22.82■■□□□ 1.24
VDR-204ENST00000547065 USP42Q9H9J4 1324 aaKnown RBP22.82■■□□□ 1.24
VDR-204ENST00000547065 DDIT3P35638 169 aa22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms