RNA–Protein interactions for RNA: ENST00000546947.5

CCDC38-205, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 4

Gene CCDC38, Length 559 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-205ENST00000546947 MMP10P09238 476 aa19.52■□□□□ 0.72
CCDC38-205ENST00000546947 TAF7Q15545 349 aaPredicted RBP19.52■□□□□ 0.72
CCDC38-205ENST00000546947 NLGN2Q8NFZ4 835 aa19.52■□□□□ 0.72
CCDC38-205ENST00000546947 KDM3BQ7LBC6 1761 aa19.52■□□□□ 0.71
CCDC38-205ENST00000546947 KIF13BQ9NQT8 1826 aa19.51■□□□□ 0.71
CCDC38-205ENST00000546947 PNISRQ8TF01 805 aaKnown RBP19.51■□□□□ 0.71
CCDC38-205ENST00000546947 COL15A1P39059 1388 aa19.51■□□□□ 0.71
CCDC38-205ENST00000546947 ZPR1O75312 459 aa19.49■□□□□ 0.71
CCDC38-205ENST00000546947 SRP68Q9UHB9 627 aaKnown RBP19.49■□□□□ 0.71
CCDC38-205ENST00000546947 CHD4Q14839 1912 aa19.49■□□□□ 0.71
CCDC38-205ENST00000546947 CANXP27824 592 aaKnown RBP19.48■□□□□ 0.71
CCDC38-205ENST00000546947 TMPOP42166 694 aaKnown RBP19.48■□□□□ 0.71
CCDC38-205ENST00000546947 RIPK4P57078 832 aa19.48■□□□□ 0.71
CCDC38-205ENST00000546947 LMOD3Q0VAK6 560 aa19.48■□□□□ 0.71
CCDC38-205ENST00000546947 NARFQ9UHQ1 456 aa19.48■□□□□ 0.71
CCDC38-205ENST00000546947 LAMB4A4D0S4 1761 aa19.47■□□□□ 0.71
CCDC38-205ENST00000546947 SNRPA1P09661 255 aaKnown RBP19.47■□□□□ 0.71
CCDC38-205ENST00000546947 EIF5P55010 431 aaKnown RBP19.47■□□□□ 0.71
CCDC38-205ENST00000546947 GPR162Q16538 588 aa19.47■□□□□ 0.71
CCDC38-205ENST00000546947 USPL1Q5W0Q7 1092 aa19.47■□□□□ 0.71
CCDC38-205ENST00000546947 RUNDC1Q96C34 613 aa19.47■□□□□ 0.71
CCDC38-205ENST00000546947 ADAMTS8Q9UP79 889 aa19.47■□□□□ 0.71
CCDC38-205ENST00000546947 PARP3Q9Y6F1 533 aa19.47■□□□□ 0.71
CCDC38-205ENST00000546947 UTRNP46939 3433 aa19.47■□□□□ 0.71
CCDC38-205ENST00000546947 GOLGB1Q14789 3259 aaKnown RBP19.47■□□□□ 0.71
CCDC38-205ENST00000546947 A0A087WZG4 1122 aa19.46■□□□□ 0.71
CCDC38-205ENST00000546947 IL6STP40189 918 aaPredicted RBP19.46■□□□□ 0.71
CCDC38-205ENST00000546947 FKBP8Q14318 412 aa19.46■□□□□ 0.71
CCDC38-205ENST00000546947 CCDC146Q8IYE0 955 aa19.45■□□□□ 0.7
CCDC38-205ENST00000546947 THUMPD2Q9BTF0 503 aaKnown RBP19.45■□□□□ 0.7
CCDC38-205ENST00000546947 USP16Q9Y5T5 823 aa19.45■□□□□ 0.7
CCDC38-205ENST00000546947 C10orf71Q711Q0 1435 aa19.44■□□□□ 0.7
CCDC38-205ENST00000546947 SCN7AQ01118 1682 aa19.44■□□□□ 0.7
CCDC38-205ENST00000546947 A1BGP04217 495 aa19.44■□□□□ 0.7
CCDC38-205ENST00000546947 MIS18AQ9NYP9 233 aa19.44■□□□□ 0.7
CCDC38-205ENST00000546947 KIAA1551Q9HCM1 1747 aa19.44■□□□□ 0.7
CCDC38-205ENST00000546947 PRAMEF22A3QJZ6 481 aa19.43■□□□□ 0.7
CCDC38-205ENST00000546947 TM4SF1P30408 202 aa19.43■□□□□ 0.7
CCDC38-205ENST00000546947 NPM2Q86SE8 214 aaKnown RBP19.43■□□□□ 0.7
CCDC38-205ENST00000546947 PELP1Q8IZL8 1130 aaKnown RBP19.43■□□□□ 0.7
CCDC38-205ENST00000546947 AFDNP55196 1824 aaKnown RBP19.42■□□□□ 0.7
CCDC38-205ENST00000546947 YY1P25490 414 aa19.42■□□□□ 0.7
CCDC38-205ENST00000546947 BABAM1Q9NWV8 329 aa19.42■□□□□ 0.7
CCDC38-205ENST00000546947 BCORQ6W2J9 1755 aa19.42■□□□□ 0.7
CCDC38-205ENST00000546947 N4BP2Q86UW6 1770 aaPredicted RBP19.42■□□□□ 0.7
CCDC38-205ENST00000546947 POLRMTO00411 1230 aaKnown RBP19.41■□□□□ 0.7
CCDC38-205ENST00000546947 TGFB2P61812 414 aa19.41■□□□□ 0.7
CCDC38-205ENST00000546947 DDR1Q08345 913 aa19.41■□□□□ 0.7
CCDC38-205ENST00000546947 BCL2L12Q9HB09 334 aa19.41■□□□□ 0.7
CCDC38-205ENST00000546947 ZNF330Q9Y3S2 320 aaPredicted RBP19.41■□□□□ 0.7
CCDC38-205ENST00000546947 NRXN2Q9P2S2 1712 aa19.41■□□□□ 0.7
CCDC38-205ENST00000546947 ANP32CO43423 234 aa19.4■□□□□ 0.7
CCDC38-205ENST00000546947 GRIN3BO60391 1043 aa19.4■□□□□ 0.7
CCDC38-205ENST00000546947 EIF4A1P60842 406 aaKnown RBP19.4■□□□□ 0.7
CCDC38-205ENST00000546947 NEUROD2Q15784 382 aa19.4■□□□□ 0.7
CCDC38-205ENST00000546947 RRP7AQ9Y3A4 280 aaKnown RBP19.4■□□□□ 0.7
CCDC38-205ENST00000546947 PXDNLA1KZ92 1463 aa19.4■□□□□ 0.7
CCDC38-205ENST00000546947 GIGYF1O75420 1035 aaPredicted RBP19.39■□□□□ 0.69
CCDC38-205ENST00000546947 YBX3P16989 372 aaKnown RBP eCLIP19.39■□□□□ 0.69
CCDC38-205ENST00000546947 NFIXQ14938 502 aa19.39■□□□□ 0.69
CCDC38-205ENST00000546947 TSPYL4Q9UJ04 414 aa19.39■□□□□ 0.69
CCDC38-205ENST00000546947 BRCA1P38398 1863 aaKnown RBP19.38■□□□□ 0.69
CCDC38-205ENST00000546947 TBC1D2BQ9UPU7 963 aa19.38■□□□□ 0.69
CCDC38-205ENST00000546947 DZIP3Q86Y13 1208 aaKnown RBP19.37■□□□□ 0.69
CCDC38-205ENST00000546947 TRIM35Q9UPQ4 493 aa19.37■□□□□ 0.69
CCDC38-205ENST00000546947 PIP4K2AP48426 406 aaPredicted RBP19.36■□□□□ 0.69
CCDC38-205ENST00000546947 CAMTA2O94983 1202 aa19.35■□□□□ 0.69
CCDC38-205ENST00000546947 SERPINB2P05120 415 aa19.35■□□□□ 0.69
CCDC38-205ENST00000546947 NBPF26B4DH59 902 aa19.34■□□□□ 0.69
CCDC38-205ENST00000546947 CCDC184Q52MB2 194 aa19.34■□□□□ 0.69
CCDC38-205ENST00000546947 TBC1D9BQ66K14 1250 aa19.34■□□□□ 0.69
CCDC38-205ENST00000546947 NBPF10Q6P3W6 841 aaKnown RBP19.34■□□□□ 0.69
CCDC38-205ENST00000546947 NBPF15Q8N660 670 aa19.34■□□□□ 0.69
CCDC38-205ENST00000546947 A0A0G2JLW4 131 aa19.33■□□□□ 0.68
CCDC38-205ENST00000546947 APAF1O14727 1248 aa19.33■□□□□ 0.68
CCDC38-205ENST00000546947 RGL2O15211 777 aa19.33■□□□□ 0.68
CCDC38-205ENST00000546947 DPEP1P16444 411 aa19.33■□□□□ 0.68
CCDC38-205ENST00000546947 ERBB4Q15303 1308 aa19.32■□□□□ 0.68
CCDC38-205ENST00000546947 CHL1O00533 1208 aa19.32■□□□□ 0.68
CCDC38-205ENST00000546947 CLEC4GQ6UXB4 293 aa19.32■□□□□ 0.68
CCDC38-205ENST00000546947 BICDL1Q6ZP65 573 aa19.32■□□□□ 0.68
CCDC38-205ENST00000546947 ARFGEF1Q9Y6D6 1849 aa19.32■□□□□ 0.68
CCDC38-205ENST00000546947 CARMIL3Q8ND23 1372 aa19.32■□□□□ 0.68
CCDC38-205ENST00000546947 MRS2Q9HD23 443 aa19.31■□□□□ 0.68
CCDC38-205ENST00000546947 ZNF652Q9Y2D9 606 aa19.31■□□□□ 0.68
CCDC38-205ENST00000546947 DLEC1Q9Y238 1755 aa19.31■□□□□ 0.68
CCDC38-205ENST00000546947 KCNA3P22001 575 aa19.3■□□□□ 0.68
CCDC38-205ENST00000546947 SETDB2Q96T68 719 aa19.3■□□□□ 0.68
CCDC38-205ENST00000546947 WWC3Q9ULE0 1092 aa19.3■□□□□ 0.68
CCDC38-205ENST00000546947 LAS1LQ9Y4W2 734 aaKnown RBP19.3■□□□□ 0.68
CCDC38-205ENST00000546947 ANKRD31Q8N7Z5 1873 aa19.29■□□□□ 0.68
CCDC38-205ENST00000546947 CFAP44Q96MT7 982 aa19.29■□□□□ 0.68
CCDC38-205ENST00000546947 PIM2Q9P1W9 311 aa19.29■□□□□ 0.68
CCDC38-205ENST00000546947 NUP98P52948 1817 aa19.29■□□□□ 0.68
CCDC38-205ENST00000546947 CALD1Q05682 793 aaKnown RBP19.28■□□□□ 0.68
CCDC38-205ENST00000546947 BCS1LQ9Y276 419 aa19.28■□□□□ 0.68
CCDC38-205ENST00000546947 MYL6BP14649 208 aa19.27■□□□□ 0.68
CCDC38-205ENST00000546947 ERVV-1B6SEH8 477 aa19.26■□□□□ 0.67
CCDC38-205ENST00000546947 EIF2S2P20042 333 aaKnown RBP19.26■□□□□ 0.67
CCDC38-205ENST00000546947 NGEFQ8N5V2 710 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms