RNA–Protein interactions for RNA: ENST00000546942.1

SRSF9-202, Transcript of serine and arginine rich splicing factor 9, humanhuman

TSL 1 (best)

Gene SRSF9, Length 946 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF9-202ENST00000546942 USPL1Q5W0Q7 1092 aa35.13■■■■□ 3.21
SRSF9-202ENST00000546942 ZNF784Q8NCA9 323 aaPredicted RBP35.13■■■■□ 3.21
SRSF9-202ENST00000546942 HEG1Q9ULI3 1381 aa35.13■■■■□ 3.21
SRSF9-202ENST00000546942 RALBP1Q15311 655 aa35.12■■■■□ 3.21
SRSF9-202ENST00000546942 FMNL2Q96PY5 1086 aa35.12■■■■□ 3.21
SRSF9-202ENST00000546942 COL15A1P39059 1388 aa35.12■■■■□ 3.21
SRSF9-202ENST00000546942 N4BP2Q86UW6 1770 aaPredicted RBP35.11■■■■□ 3.21
SRSF9-202ENST00000546942 KIF13BQ9NQT8 1826 aa35.11■■■■□ 3.21
SRSF9-202ENST00000546942 TEX13AQ9BXU3 409 aaPredicted RBP35.08■■■■□ 3.21
SRSF9-202ENST00000546942 DLG5Q8TDM6 1919 aa35.07■■■■□ 3.2
SRSF9-202ENST00000546942 A0A0G2JLW4 131 aa35.07■■■■□ 3.2
SRSF9-202ENST00000546942 DDR1Q08345 913 aa35.07■■■■□ 3.2
SRSF9-202ENST00000546942 NARFQ9UHQ1 456 aa35.07■■■■□ 3.2
SRSF9-202ENST00000546942 ZNF330Q9Y3S2 320 aaPredicted RBP35.07■■■■□ 3.2
SRSF9-202ENST00000546942 C10orf71Q711Q0 1435 aa35.06■■■■□ 3.2
SRSF9-202ENST00000546942 PXDNLA1KZ92 1463 aa35.05■■■■□ 3.2
SRSF9-202ENST00000546942 HTATSF1O43719 755 aaKnown RBP35.05■■■■□ 3.2
SRSF9-202ENST00000546942 TGFB2P61812 414 aa35.05■■■■□ 3.2
SRSF9-202ENST00000546942 KIAA1551Q9HCM1 1747 aa35.03■■■■□ 3.2
SRSF9-202ENST00000546942 ZEB1P37275 1124 aaPredicted RBP35.03■■■■□ 3.2
SRSF9-202ENST00000546942 PLEKHF1Q96S99 279 aa35.03■■■■□ 3.2
SRSF9-202ENST00000546942 DPEP1P16444 411 aa35.02■■■■□ 3.2
SRSF9-202ENST00000546942 TM4SF1P30408 202 aa35.02■■■■□ 3.2
SRSF9-202ENST00000546942 EIF5P55010 431 aaKnown RBP35.01■■■■□ 3.2
SRSF9-202ENST00000546942 PNNQ9H307 717 aaKnown RBP35.01■■■■□ 3.2
SRSF9-202ENST00000546942 MAPK8IP3Q9UPT6 1336 aa35.01■■■■□ 3.19
SRSF9-202ENST00000546942 POLRMTO00411 1230 aaKnown RBP35■■■■□ 3.19
SRSF9-202ENST00000546942 A1BGP04217 495 aa35■■■■□ 3.19
SRSF9-202ENST00000546942 MIS18AQ9NYP9 233 aa35■■■■□ 3.19
SRSF9-202ENST00000546942 TAF7Q15545 349 aaPredicted RBP34.99■■■■□ 3.19
SRSF9-202ENST00000546942 BCS1LQ9Y276 419 aa34.99■■■■□ 3.19
SRSF9-202ENST00000546942 A0A087WZG4 1122 aa34.98■■■■□ 3.19
SRSF9-202ENST00000546942 PRAMEF22A3QJZ6 481 aa34.98■■■■□ 3.19
SRSF9-202ENST00000546942 NFIXQ14938 502 aa34.98■■■■□ 3.19
SRSF9-202ENST00000546942 NFE2L2Q16236 605 aa34.98■■■■□ 3.19
SRSF9-202ENST00000546942 BCL2L12Q9HB09 334 aa34.98■■■■□ 3.19
SRSF9-202ENST00000546942 TBC1D2BQ9UPU7 963 aa34.97■■■■□ 3.19
SRSF9-202ENST00000546942 USP16Q9Y5T5 823 aa34.97■■■■□ 3.19
SRSF9-202ENST00000546942 MYBBP1AQ9BQG0 1328 aaKnown RBP34.97■■■■□ 3.19
SRSF9-202ENST00000546942 BICDL1Q6ZP65 573 aa34.96■■■■□ 3.19
SRSF9-202ENST00000546942 NPM2Q86SE8 214 aaKnown RBP34.96■■■■□ 3.19
SRSF9-202ENST00000546942 AFDNP55196 1824 aaKnown RBP34.95■■■■□ 3.19
SRSF9-202ENST00000546942 PIP4K2AP48426 406 aaPredicted RBP34.95■■■■□ 3.19
SRSF9-202ENST00000546942 SNRPA1P09661 255 aaKnown RBP34.94■■■■□ 3.18
SRSF9-202ENST00000546942 IL6STP40189 918 aaPredicted RBP34.94■■■■□ 3.18
SRSF9-202ENST00000546942 THUMPD2Q9BTF0 503 aaKnown RBP34.94■■■■□ 3.18
SRSF9-202ENST00000546942 SERPINB2P05120 415 aa34.91■■■■□ 3.18
SRSF9-202ENST00000546942 KCNA3P22001 575 aa34.91■■■■□ 3.18
SRSF9-202ENST00000546942 CHRNA5P30532 468 aa34.9■■■■□ 3.18
SRSF9-202ENST00000546942 BRCA1P38398 1863 aaKnown RBP34.9■■■■□ 3.18
SRSF9-202ENST00000546942 PIM2Q9P1W9 311 aa34.88■■■■□ 3.17
SRSF9-202ENST00000546942 TBC1D9BQ66K14 1250 aa34.87■■■■□ 3.17
SRSF9-202ENST00000546942 SCN7AQ01118 1682 aa34.86■■■■□ 3.17
SRSF9-202ENST00000546942 RIPK4P57078 832 aa34.86■■■■□ 3.17
SRSF9-202ENST00000546942 ARHGAP27Q6ZUM4 889 aa34.86■■■■□ 3.17
SRSF9-202ENST00000546942 PNISRQ8TF01 805 aaKnown RBP34.86■■■■□ 3.17
SRSF9-202ENST00000546942 DZIP3Q86Y13 1208 aaKnown RBP34.85■■■■□ 3.17
SRSF9-202ENST00000546942 CCDC146Q8IYE0 955 aa34.85■■■■□ 3.17
SRSF9-202ENST00000546942 KDM3BQ7LBC6 1761 aa34.84■■■■□ 3.17
SRSF9-202ENST00000546942 NRXN2Q9P2S2 1712 aa34.84■■■■□ 3.17
SRSF9-202ENST00000546942 DALRD3Q5D0E6 543 aaKnown RBP34.83■■■■□ 3.17
SRSF9-202ENST00000546942 ATP10DQ9P241 1426 aa34.82■■■■□ 3.17
SRSF9-202ENST00000546942 CAMTA2O94983 1202 aa34.82■■■■□ 3.16
SRSF9-202ENST00000546942 WDR43Q15061 677 aaKnown RBP eCLIP34.82■■■■□ 3.16
SRSF9-202ENST00000546942 PRKRIP1Q9H875 184 aaPredicted RBP34.81■■■■□ 3.16
SRSF9-202ENST00000546942 RRP7AQ9Y3A4 280 aaKnown RBP34.81■■■■□ 3.16
SRSF9-202ENST00000546942 NEUROD2Q15784 382 aa34.8■■■■□ 3.16
SRSF9-202ENST00000546942 ZNF526Q8TF50 670 aaPredicted RBP34.8■■■■□ 3.16
SRSF9-202ENST00000546942 ARFGEF1Q9Y6D6 1849 aa34.8■■■■□ 3.16
SRSF9-202ENST00000546942 NBPF26B4DH59 902 aa34.79■■■■□ 3.16
SRSF9-202ENST00000546942 TMPOP42166 694 aaKnown RBP34.79■■■■□ 3.16
SRSF9-202ENST00000546942 NBPF10Q6P3W6 841 aaKnown RBP34.79■■■■□ 3.16
SRSF9-202ENST00000546942 NBPF15Q8N660 670 aa34.79■■■■□ 3.16
SRSF9-202ENST00000546942 BCORQ6W2J9 1755 aa34.78■■■■□ 3.16
SRSF9-202ENST00000546942 EIF4A1P60842 406 aaKnown RBP34.78■■■■□ 3.16
SRSF9-202ENST00000546942 CCDC24Q8N4L8 307 aa34.78■■■■□ 3.16
SRSF9-202ENST00000546942 SETDB2Q96T68 719 aa34.78■■■■□ 3.16
SRSF9-202ENST00000546942 LAMB4A4D0S4 1761 aa34.77■■■■□ 3.16
SRSF9-202ENST00000546942 CARMIL3Q8ND23 1372 aa34.77■■■■□ 3.16
SRSF9-202ENST00000546942 GIGYF1O75420 1035 aaPredicted RBP34.77■■■■□ 3.16
SRSF9-202ENST00000546942 NPHP1O15259 732 aa34.75■■■■□ 3.15
SRSF9-202ENST00000546942 C2CD5Q86YS7 1000 aa34.75■■■■□ 3.15
SRSF9-202ENST00000546942 TSPYL4Q9UJ04 414 aa34.75■■■■□ 3.15
SRSF9-202ENST00000546942 ADAMTS8Q9UP79 889 aa34.75■■■■□ 3.15
SRSF9-202ENST00000546942 ADCY9O60503 1353 aa34.74■■■■□ 3.15
SRSF9-202ENST00000546942 NGEFQ8N5V2 710 aa34.74■■■■□ 3.15
SRSF9-202ENST00000546942 GPBP1L1Q9HC44 474 aaPredicted RBP34.73■■■■□ 3.15
SRSF9-202ENST00000546942 H0YIN7 160 aa34.72■■■■□ 3.15
SRSF9-202ENST00000546942 LMOD3Q0VAK6 560 aa34.72■■■■□ 3.15
SRSF9-202ENST00000546942 PRR5LQ6MZQ0 368 aa34.72■■■■□ 3.15
SRSF9-202ENST00000546942 RUNDC1Q96C34 613 aa34.72■■■■□ 3.15
SRSF9-202ENST00000546942 ZNF652Q9Y2D9 606 aa34.71■■■■□ 3.15
SRSF9-202ENST00000546942 ANKRD31Q8N7Z5 1873 aa34.71■■■■□ 3.15
SRSF9-202ENST00000546942 C1QTNF8P60827 252 aa34.7■■■■□ 3.15
SRSF9-202ENST00000546942 CNBD1Q8NA66 436 aa34.7■■■■□ 3.15
SRSF9-202ENST00000546942 DLEC1Q9Y238 1755 aa34.69■■■■□ 3.14
SRSF9-202ENST00000546942 CLEC4GQ6UXB4 293 aa34.68■■■■□ 3.14
SRSF9-202ENST00000546942 MYL6BP14649 208 aa34.67■■■■□ 3.14
SRSF9-202ENST00000546942 BRIP1Q9BX63 1249 aa34.67■■■■□ 3.14
SRSF9-202ENST00000546942 PDE6BP35913 854 aa34.66■■■■□ 3.14
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms