RNA–Protein interactions for RNA: ENST00000546907.1

TPCN1-208, Transcript of two pore segment channel 1, humanhuman

TSL 4

Gene TPCN1, Length 565 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPCN1-208ENST00000546907 ZPR1O75312 459 aa20.29■□□□□ 0.84
TPCN1-208ENST00000546907 NRXN2Q9P2S2 1712 aa20.28■□□□□ 0.84
TPCN1-208ENST00000546907 GIGYF1O75420 1035 aaPredicted RBP20.28■□□□□ 0.84
TPCN1-208ENST00000546907 U2AF1L5P0DN76 240 aaPredicted RBP20.28■□□□□ 0.84
TPCN1-208ENST00000546907 DPEP1P16444 411 aa20.28■□□□□ 0.84
TPCN1-208ENST00000546907 U2AF1Q01081 240 aaKnown RBP eCLIP20.28■□□□□ 0.84
TPCN1-208ENST00000546907 USPL1Q5W0Q7 1092 aa20.28■□□□□ 0.84
TPCN1-208ENST00000546907 ZNF790Q6PG37 636 aa20.28■□□□□ 0.84
TPCN1-208ENST00000546907 DLG5Q8TDM6 1919 aa20.27■□□□□ 0.84
TPCN1-208ENST00000546907 CEP350Q5VT06 3117 aa20.27■□□□□ 0.84
TPCN1-208ENST00000546907 HEG1Q9ULI3 1381 aa20.27■□□□□ 0.84
TPCN1-208ENST00000546907 C1QTNF8P60827 252 aa20.27■□□□□ 0.84
TPCN1-208ENST00000546907 ZNF496Q96IT1 587 aaPredicted RBP20.27■□□□□ 0.84
TPCN1-208ENST00000546907 NARFQ9UHQ1 456 aa20.27■□□□□ 0.84
TPCN1-208ENST00000546907 SCN7AQ01118 1682 aa20.26■□□□□ 0.83
TPCN1-208ENST00000546907 POLRMTO00411 1230 aaKnown RBP20.26■□□□□ 0.83
TPCN1-208ENST00000546907 STARD3NLO95772 234 aa20.26■□□□□ 0.83
TPCN1-208ENST00000546907 TM4SF1P30408 202 aa20.26■□□□□ 0.83
TPCN1-208ENST00000546907 BCS1LQ9Y276 419 aa20.26■□□□□ 0.83
TPCN1-208ENST00000546907 FCHSD2O94868 740 aa20.25■□□□□ 0.83
TPCN1-208ENST00000546907 CANXP27824 592 aaKnown RBP20.24■□□□□ 0.83
TPCN1-208ENST00000546907 DLEC1Q9Y238 1755 aa20.23■□□□□ 0.83
TPCN1-208ENST00000546907 KCNA3P22001 575 aa20.23■□□□□ 0.83
TPCN1-208ENST00000546907 FMNL2Q96PY5 1086 aa20.23■□□□□ 0.83
TPCN1-208ENST00000546907 TEX13AQ9BXU3 409 aaPredicted RBP20.23■□□□□ 0.83
TPCN1-208ENST00000546907 EIF5P55010 431 aaKnown RBP20.22■□□□□ 0.83
TPCN1-208ENST00000546907 NFIXQ14938 502 aa20.22■□□□□ 0.83
TPCN1-208ENST00000546907 BCL2L12Q9HB09 334 aa20.22■□□□□ 0.83
TPCN1-208ENST00000546907 BTBD11A6QL63 1104 aa20.21■□□□□ 0.83
TPCN1-208ENST00000546907 BCORQ6W2J9 1755 aa20.21■□□□□ 0.83
TPCN1-208ENST00000546907 KCNQ3O43525 872 aa20.2■□□□□ 0.82
TPCN1-208ENST00000546907 RTF1Q92541 710 aaKnown RBP20.2■□□□□ 0.82
TPCN1-208ENST00000546907 GPBP1L1Q9HC44 474 aaPredicted RBP20.2■□□□□ 0.82
TPCN1-208ENST00000546907 PIM2Q9P1W9 311 aa20.2■□□□□ 0.82
TPCN1-208ENST00000546907 SBF1O95248 1867 aa20.2■□□□□ 0.82
TPCN1-208ENST00000546907 A0A087WZG4 1122 aa20.19■□□□□ 0.82
TPCN1-208ENST00000546907 MCM10Q7L590 875 aa20.19■□□□□ 0.82
TPCN1-208ENST00000546907 ANKRD31Q8N7Z5 1873 aa20.19■□□□□ 0.82
TPCN1-208ENST00000546907 CHRNA5P30532 468 aa20.18■□□□□ 0.82
TPCN1-208ENST00000546907 ARHGAP27Q6ZUM4 889 aa20.18■□□□□ 0.82
TPCN1-208ENST00000546907 ZNF526Q8TF50 670 aaPredicted RBP20.18■□□□□ 0.82
TPCN1-208ENST00000546907 SENP3-EIF4A1A0A087X0R7 540 aa20.17■□□□□ 0.82
TPCN1-208ENST00000546907 HTATSF1O43719 755 aaKnown RBP20.17■□□□□ 0.82
TPCN1-208ENST00000546907 IL6STP40189 918 aaPredicted RBP20.17■□□□□ 0.82
TPCN1-208ENST00000546907 DALRD3Q5D0E6 543 aaKnown RBP20.17■□□□□ 0.82
TPCN1-208ENST00000546907 LAMB4A4D0S4 1761 aa20.16■□□□□ 0.82
TPCN1-208ENST00000546907 KDM3BQ7LBC6 1761 aa20.16■□□□□ 0.82
TPCN1-208ENST00000546907 A1BGP04217 495 aa20.16■□□□□ 0.82
TPCN1-208ENST00000546907 SERPINB2P05120 415 aa20.16■□□□□ 0.82
TPCN1-208ENST00000546907 DCTN1Q14203 1278 aa20.16■□□□□ 0.82
TPCN1-208ENST00000546907 ZNF330Q9Y3S2 320 aaPredicted RBP20.16■□□□□ 0.82
TPCN1-208ENST00000546907 CARMIL3Q8ND23 1372 aa20.14■□□□□ 0.81
TPCN1-208ENST00000546907 TBC1D2BQ9UPU7 963 aa20.14■□□□□ 0.81
TPCN1-208ENST00000546907 BICDL1Q6ZP65 573 aa20.13■□□□□ 0.81
TPCN1-208ENST00000546907 CCDC88AQ3V6T2 1871 aa20.13■□□□□ 0.81
TPCN1-208ENST00000546907 COL11A2P13942 1736 aaPredicted RBP20.13■□□□□ 0.81
TPCN1-208ENST00000546907 PRAMEF22A3QJZ6 481 aa20.12■□□□□ 0.81
TPCN1-208ENST00000546907 NEFMP07197 916 aa20.12■□□□□ 0.81
TPCN1-208ENST00000546907 SNRPA1P09661 255 aaKnown RBP20.12■□□□□ 0.81
TPCN1-208ENST00000546907 TBC1D9BQ66K14 1250 aa20.12■□□□□ 0.81
TPCN1-208ENST00000546907 NPM2Q86SE8 214 aaKnown RBP20.12■□□□□ 0.81
TPCN1-208ENST00000546907 USP16Q9Y5T5 823 aa20.12■□□□□ 0.81
TPCN1-208ENST00000546907 CAMTA2O94983 1202 aa20.11■□□□□ 0.81
TPCN1-208ENST00000546907 PLEKHF1Q96S99 279 aa20.11■□□□□ 0.81
TPCN1-208ENST00000546907 TAF7Q15545 349 aaPredicted RBP20.1■□□□□ 0.81
TPCN1-208ENST00000546907 C9orf131Q5VYM1 1079 aa20.1■□□□□ 0.81
TPCN1-208ENST00000546907 CACNA1SQ13698 1873 aa20.09■□□□□ 0.81
TPCN1-208ENST00000546907 PIP4K2AP48426 406 aaPredicted RBP20.09■□□□□ 0.81
TPCN1-208ENST00000546907 DZIP3Q86Y13 1208 aaKnown RBP20.09■□□□□ 0.81
TPCN1-208ENST00000546907 KIF3CO14782 793 aa20.08■□□□□ 0.81
TPCN1-208ENST00000546907 RALBP1Q15311 655 aa20.08■□□□□ 0.81
TPCN1-208ENST00000546907 NFE2L2Q16236 605 aa20.08■□□□□ 0.81
TPCN1-208ENST00000546907 C2CD5Q86YS7 1000 aa20.08■□□□□ 0.81
TPCN1-208ENST00000546907 H0YIN7 160 aa20.07■□□□□ 0.8
TPCN1-208ENST00000546907 PRR5LQ6MZQ0 368 aa20.07■□□□□ 0.8
TPCN1-208ENST00000546907 MIS18AQ9NYP9 233 aa20.07■□□□□ 0.8
TPCN1-208ENST00000546907 MAPK8IP3Q9UPT6 1336 aa20.06■□□□□ 0.8
TPCN1-208ENST00000546907 ARFGEF2Q9Y6D5 1785 aa20.06■□□□□ 0.8
TPCN1-208ENST00000546907 TTLL6Q8N841 843 aa20.06■□□□□ 0.8
TPCN1-208ENST00000546907 SETDB2Q96T68 719 aa20.06■□□□□ 0.8
TPCN1-208ENST00000546907 PNNQ9H307 717 aaKnown RBP20.06■□□□□ 0.8
TPCN1-208ENST00000546907 NUP98P52948 1817 aa20.05■□□□□ 0.8
TPCN1-208ENST00000546907 NBPF26B4DH59 902 aa20.05■□□□□ 0.8
TPCN1-208ENST00000546907 NBPF10Q6P3W6 841 aaKnown RBP20.05■□□□□ 0.8
TPCN1-208ENST00000546907 NBPF15Q8N660 670 aa20.05■□□□□ 0.8
TPCN1-208ENST00000546907 PNISRQ8TF01 805 aaKnown RBP20.05■□□□□ 0.8
TPCN1-208ENST00000546907 BRIP1Q9BX63 1249 aa20.05■□□□□ 0.8
TPCN1-208ENST00000546907 RNF181Q9P0P0 153 aa20.05■□□□□ 0.8
TPCN1-208ENST00000546907 FER1L6Q2WGJ9 1857 aa20.05■□□□□ 0.8
TPCN1-208ENST00000546907 TIAM2Q8IVF5 1701 aa20.05■□□□□ 0.8
TPCN1-208ENST00000546907 DICER1Q9UPY3 1922 aaKnown RBP20.04■□□□□ 0.8
TPCN1-208ENST00000546907 TNRC6CQ9HCJ0 1690 aaKnown RBP20.04■□□□□ 0.8
TPCN1-208ENST00000546907 DDX10Q13206 875 aaKnown RBP20.04■□□□□ 0.8
TPCN1-208ENST00000546907 CNBD1Q8NA66 436 aa20.04■□□□□ 0.8
TPCN1-208ENST00000546907 PDZRN3Q9UPQ7 1066 aa20.04■□□□□ 0.8
TPCN1-208ENST00000546907 PDE6BP35913 854 aa20.03■□□□□ 0.8
TPCN1-208ENST00000546907 CLEC4GQ6UXB4 293 aa20.03■□□□□ 0.8
TPCN1-208ENST00000546907 CCDC24Q8N4L8 307 aa20.03■□□□□ 0.8
TPCN1-208ENST00000546907 THUMPD2Q9BTF0 503 aaKnown RBP20.03■□□□□ 0.8
TPCN1-208ENST00000546907 SLX4Q8IY92 1834 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms