RNA–Protein interactions for RNA: ENST00000546882.5

RFX4-207, Transcript of regulatory factor X4, humanhuman

TSL 3

Gene RFX4, Length 660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-207ENST00000546882 HSPA1BP0DMV9 641 aaKnown RBP12.22□□□□□ -0.45
RFX4-207ENST00000546882 C9orf131Q5VYM1 1079 aa12.22□□□□□ -0.45
RFX4-207ENST00000546882 MPRIPQ6WCQ1 1025 aa12.22□□□□□ -0.45
RFX4-207ENST00000546882 C16orf71Q8IYS4 520 aaPredicted RBP12.22□□□□□ -0.45
RFX4-207ENST00000546882 MFRPQ9BY79 579 aa12.22□□□□□ -0.45
RFX4-207ENST00000546882 PKD1L3Q7Z443 1732 aa12.22□□□□□ -0.45
RFX4-207ENST00000546882 KCPQ6ZWJ8 1503 aa12.21□□□□□ -0.45
RFX4-207ENST00000546882 A0A1W2PP64 1363 aa12.21□□□□□ -0.45
RFX4-207ENST00000546882 ARFGEF1Q9Y6D6 1849 aa12.21□□□□□ -0.45
RFX4-207ENST00000546882 CYP27B1O15528 508 aa12.21□□□□□ -0.45
RFX4-207ENST00000546882 HDGFL2Q7Z4V5 671 aaPredicted RBP12.21□□□□□ -0.45
RFX4-207ENST00000546882 USHBP1Q8N6Y0 703 aa12.21□□□□□ -0.45
RFX4-207ENST00000546882 LINC00116Q8NCU8 138 aa12.21□□□□□ -0.45
RFX4-207ENST00000546882 SMARCC1Q92922 1105 aaPredicted RBP12.21□□□□□ -0.45
RFX4-207ENST00000546882 L3MBTL2Q969R5 705 aa12.21□□□□□ -0.45
RFX4-207ENST00000546882 L3MBTL3Q96JM7 780 aaPredicted RBP12.21□□□□□ -0.45
RFX4-207ENST00000546882 PLEKHG2Q9H7P9 1386 aa12.2□□□□□ -0.46
RFX4-207ENST00000546882 DPEP1P16444 411 aa12.2□□□□□ -0.46
RFX4-207ENST00000546882 KCNA3P22001 575 aa12.2□□□□□ -0.46
RFX4-207ENST00000546882 FBXO22Q8NEZ5 403 aa12.2□□□□□ -0.46
RFX4-207ENST00000546882 TMC1Q8TDI8 760 aa12.2□□□□□ -0.46
RFX4-207ENST00000546882 PIGBQ92521 554 aa12.2□□□□□ -0.46
RFX4-207ENST00000546882 RRAGCQ9HB90 399 aa12.2□□□□□ -0.46
RFX4-207ENST00000546882 SBF1O95248 1867 aa12.19□□□□□ -0.46
RFX4-207ENST00000546882 AMPHP49418 695 aa12.19□□□□□ -0.46
RFX4-207ENST00000546882 TNRC6CQ9HCJ0 1690 aaKnown RBP12.19□□□□□ -0.46
RFX4-207ENST00000546882 PCDH11XQ9BZA7 1347 aa12.18□□□□□ -0.46
RFX4-207ENST00000546882 PCDH11YQ9BZA8 1340 aa12.18□□□□□ -0.46
RFX4-207ENST00000546882 LOC102724428A0A0B4J2F2 783 aa12.18□□□□□ -0.46
RFX4-207ENST00000546882 FCHSD2O94868 740 aa12.18□□□□□ -0.46
RFX4-207ENST00000546882 SIK1P57059 783 aa12.18□□□□□ -0.46
RFX4-207ENST00000546882 ITPK1Q13572 414 aa12.18□□□□□ -0.46
RFX4-207ENST00000546882 RAPGEF4Q8WZA2 1011 aa12.18□□□□□ -0.46
RFX4-207ENST00000546882 ROCK2O75116 1388 aaKnown RBP12.18□□□□□ -0.46
RFX4-207ENST00000546882 KDM2BQ8NHM5 1336 aa12.17□□□□□ -0.46
RFX4-207ENST00000546882 GNPATO15228 680 aa12.17□□□□□ -0.46
RFX4-207ENST00000546882 TATP17735 454 aaPredicted RBP12.17□□□□□ -0.46
RFX4-207ENST00000546882 SMC1BQ8NDV3 1235 aa12.17□□□□□ -0.46
RFX4-207ENST00000546882 TERF2IPQ9NYB0 399 aa12.17□□□□□ -0.46
RFX4-207ENST00000546882 BOLA1Q9Y3E2 137 aa12.17□□□□□ -0.46
RFX4-207ENST00000546882 RTL1A6NKG5 1358 aa12.17□□□□□ -0.46
RFX4-207ENST00000546882 C4AP0C0L4 1744 aa12.16□□□□□ -0.46
RFX4-207ENST00000546882 RRS1Q15050 365 aaKnown RBP12.15□□□□□ -0.46
RFX4-207ENST00000546882 NKX1-1Q15270 411 aaPredicted RBP12.15□□□□□ -0.46
RFX4-207ENST00000546882 NLGN1Q8N2Q7 840 aa12.15□□□□□ -0.46
RFX4-207ENST00000546882 COG3Q96JB2 828 aa12.15□□□□□ -0.46
RFX4-207ENST00000546882 DCAF5Q96JK2 942 aa12.15□□□□□ -0.46
RFX4-207ENST00000546882 RNF181Q9P0P0 153 aa12.15□□□□□ -0.46
RFX4-207ENST00000546882 G3V3G9 751 aa12.14□□□□□ -0.47
RFX4-207ENST00000546882 TMF1P82094 1093 aa12.14□□□□□ -0.47
RFX4-207ENST00000546882 C3orf67Q6ZVT6 689 aa12.14□□□□□ -0.47
RFX4-207ENST00000546882 ASAP1Q9ULH1 1129 aa12.14□□□□□ -0.47
RFX4-207ENST00000546882 GYS1P13807 737 aa12.13□□□□□ -0.47
RFX4-207ENST00000546882 SLAIN1Q8ND83 568 aa12.13□□□□□ -0.47
RFX4-207ENST00000546882 CCDC87Q9NVE4 849 aa12.13□□□□□ -0.47
RFX4-207ENST00000546882 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.13□□□□□ -0.47
RFX4-207ENST00000546882 ATP6V1AP38606 617 aa12.12□□□□□ -0.47
RFX4-207ENST00000546882 HSP90AB2PQ58FF8 381 aa12.12□□□□□ -0.47
RFX4-207ENST00000546882 TRAPPC3LQ5T215 181 aa12.12□□□□□ -0.47
RFX4-207ENST00000546882 PUS7Q96PZ0 661 aaKnown RBP12.12□□□□□ -0.47
RFX4-207ENST00000546882 PIM2Q9P1W9 311 aa12.12□□□□□ -0.47
RFX4-207ENST00000546882 INSRP06213 1382 aa12.11□□□□□ -0.47
RFX4-207ENST00000546882 ARHGEF1Q92888 912 aaKnown RBP12.11□□□□□ -0.47
RFX4-207ENST00000546882 SLC4A9Q96Q91 983 aa12.11□□□□□ -0.47
RFX4-207ENST00000546882 KDM6AO15550 1401 aaPredicted RBP12.11□□□□□ -0.47
RFX4-207ENST00000546882 SMG6Q86US8 1419 aaKnown RBP12.11□□□□□ -0.47
RFX4-207ENST00000546882 MYH14Q7Z406 1995 aaKnown RBP12.1□□□□□ -0.47
RFX4-207ENST00000546882 KDRP35968 1356 aa12.1□□□□□ -0.47
RFX4-207ENST00000546882 DALRD3Q5D0E6 543 aaKnown RBP12.1□□□□□ -0.47
RFX4-207ENST00000546882 MICALL2Q8IY33 904 aa12.1□□□□□ -0.47
RFX4-207ENST00000546882 TMEM121BQ9BXQ6 578 aaPredicted RBP12.1□□□□□ -0.47
RFX4-207ENST00000546882 ATG3Q9NT62 314 aa12.1□□□□□ -0.47
RFX4-207ENST00000546882 RTCBQ9Y3I0 505 aaKnown RBP12.1□□□□□ -0.47
RFX4-207ENST00000546882 NCAPD2Q15021 1401 aa12.1□□□□□ -0.47
RFX4-207ENST00000546882 POTECB2RU33 542 aa12.09□□□□□ -0.47
RFX4-207ENST00000546882 VEGFAP15692 232 aaPredicted RBP12.09□□□□□ -0.47
RFX4-207ENST00000546882 TMOD3Q9NYL9 352 aa12.09□□□□□ -0.47
RFX4-207ENST00000546882 PARP3Q9Y6F1 533 aa12.09□□□□□ -0.47
RFX4-207ENST00000546882 ZNF831Q5JPB2 1677 aa12.09□□□□□ -0.47
RFX4-207ENST00000546882 ZC3H4Q9UPT8 1303 aaKnown RBP12.09□□□□□ -0.47
RFX4-207ENST00000546882 COL5A3P25940 1745 aaPredicted RBP12.08□□□□□ -0.47
RFX4-207ENST00000546882 GLTPD2A6NH11 291 aa12.08□□□□□ -0.48
RFX4-207ENST00000546882 FYB1O15117 783 aa12.08□□□□□ -0.48
RFX4-207ENST00000546882 FOXN1O15353 648 aa12.08□□□□□ -0.48
RFX4-207ENST00000546882 RC3H1Q5TC82 1133 aaKnown RBP12.08□□□□□ -0.48
RFX4-207ENST00000546882 SIN3AQ96ST3 1273 aa12.08□□□□□ -0.48
RFX4-207ENST00000546882 PCDH10Q9P2E7 1040 aa12.08□□□□□ -0.48
RFX4-207ENST00000546882 RPS6KA4O75676 772 aa12.07□□□□□ -0.48
RFX4-207ENST00000546882 CHRNA5P30532 468 aa12.07□□□□□ -0.48
RFX4-207ENST00000546882 RASSF7Q02833 373 aa12.07□□□□□ -0.48
RFX4-207ENST00000546882 CCDC88AQ3V6T2 1871 aa12.07□□□□□ -0.48
RFX4-207ENST00000546882 GGNBP2Q9H3C7 697 aa12.07□□□□□ -0.48
RFX4-207ENST00000546882 PRDM10Q9NQV6 1147 aa12.07□□□□□ -0.48
RFX4-207ENST00000546882 FLT4P35916 1363 aa12.06□□□□□ -0.48
RFX4-207ENST00000546882 DDR1Q08345 913 aa12.06□□□□□ -0.48
RFX4-207ENST00000546882 CNTNAP4Q9C0A0 1308 aa12.06□□□□□ -0.48
RFX4-207ENST00000546882 RFC4P35249 363 aa12.05□□□□□ -0.48
RFX4-207ENST00000546882 CARD11Q9BXL7 1154 aa12.05□□□□□ -0.48
RFX4-207ENST00000546882 MKRN1Q9UHC7 482 aaKnown RBP12.05□□□□□ -0.48
RFX4-207ENST00000546882 SPG7Q9UQ90 795 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms