RNA–Protein interactions for RNA: ENST00000545913.5

CIT-217, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 5

Gene CIT, Length 8,520 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-217ENST00000545913 TMEM266Q2M3C6 531 aa13.61□□□□□ -0.23
CIT-217ENST00000545913 NUTM1Q86Y26 1132 aa13.61□□□□□ -0.23
CIT-217ENST00000545913 KIF18AQ8NI77 898 aa13.61□□□□□ -0.23
CIT-217ENST00000545913 PLCD4Q9BRC7 762 aa13.61□□□□□ -0.23
CIT-217ENST00000545913 RNF41Q9H4P4 317 aaPredicted RBP13.61□□□□□ -0.23
CIT-217ENST00000545913 NAIPQ13075 1403 aa13.61□□□□□ -0.23
CIT-217ENST00000545913 MINDY4BA8MYZ0 360 aa13.6□□□□□ -0.23
CIT-217ENST00000545913 PTPN14Q15678 1187 aa13.6□□□□□ -0.23
CIT-217ENST00000545913 KIAA0586Q9BVV6 1533 aa13.6□□□□□ -0.23
CIT-217ENST00000545913 CRACR2BQ8N4Y2 399 aaPredicted RBP13.6□□□□□ -0.23
CIT-217ENST00000545913 CASQ1P31415 396 aa13.6□□□□□ -0.23
CIT-217ENST00000545913 CACNA2D4Q7Z3S7 1137 aa13.6□□□□□ -0.23
CIT-217ENST00000545913 SETD1BQ9UPS6 1966 aaKnown RBP13.6□□□□□ -0.23
CIT-217ENST00000545913 SLC5A1P13866 664 aa13.6□□□□□ -0.23
CIT-217ENST00000545913 CCDC83Q8IWF9 413 aa13.59□□□□□ -0.23
CIT-217ENST00000545913 CAMK4Q16566 473 aa13.59□□□□□ -0.23
CIT-217ENST00000545913 SLC12A7Q9Y666 1083 aa13.59□□□□□ -0.23
CIT-217ENST00000545913 RAPGEF3O95398 923 aa13.59□□□□□ -0.23
CIT-217ENST00000545913 NSD2O96028 1365 aa13.59□□□□□ -0.23
CIT-217ENST00000545913 A0A087WZG4 1122 aa13.59□□□□□ -0.23
CIT-217ENST00000545913 ZSCAN30Q86W11 494 aa13.59□□□□□ -0.23
CIT-217ENST00000545913 MCM10Q7L590 875 aa13.59□□□□□ -0.23
CIT-217ENST00000545913 ZNF213O14771 459 aa13.58□□□□□ -0.23
CIT-217ENST00000545913 ANAPC15P60006 121 aa13.58□□□□□ -0.23
CIT-217ENST00000545913 TAF3Q5VWG9 929 aa13.58□□□□□ -0.23
CIT-217ENST00000545913 CCDC85AQ96PX6 553 aaPredicted RBP13.58□□□□□ -0.23
CIT-217ENST00000545913 EHMT1Q9H9B1 1298 aa13.58□□□□□ -0.23
CIT-217ENST00000545913 KIF20AO95235 890 aa13.58□□□□□ -0.24
CIT-217ENST00000545913 BOLA2Q9H3K6 86 aa13.58□□□□□ -0.24
CIT-217ENST00000545913 EIF2AK4Q9P2K8 1649 aaKnown RBP13.58□□□□□ -0.24
CIT-217ENST00000545913 MAP3K1Q13233 1512 aa13.58□□□□□ -0.24
CIT-217ENST00000545913 TMCO3Q6UWJ1 677 aa13.58□□□□□ -0.24
CIT-217ENST00000545913 BICDL1Q6ZP65 573 aa13.58□□□□□ -0.24
CIT-217ENST00000545913 CATIPQ7Z7H3 387 aa13.58□□□□□ -0.24
CIT-217ENST00000545913 CUL5Q93034 780 aa13.58□□□□□ -0.24
CIT-217ENST00000545913 ADGRL1O94910 1474 aa13.58□□□□□ -0.24
CIT-217ENST00000545913 TOP1P11387 765 aaKnown RBP13.58□□□□□ -0.24
CIT-217ENST00000545913 MPNDQ8N594 471 aa13.58□□□□□ -0.24
CIT-217ENST00000545913 DYDC1Q8WWB3 177 aa13.58□□□□□ -0.24
CIT-217ENST00000545913 DHX29Q7Z478 1369 aaKnown RBP13.57□□□□□ -0.24
CIT-217ENST00000545913 ZC3H6P61129 1189 aaKnown RBP13.57□□□□□ -0.24
CIT-217ENST00000545913 SSRP1Q08945 709 aaKnown RBP13.57□□□□□ -0.24
CIT-217ENST00000545913 PRPF40BQ6NWY9 871 aaKnown RBP13.57□□□□□ -0.24
CIT-217ENST00000545913 RRP9O43818 475 aaKnown RBP13.57□□□□□ -0.24
CIT-217ENST00000545913 KLHL10Q6JEL2 608 aa13.57□□□□□ -0.24
CIT-217ENST00000545913 ZNF444Q8N0Y2 327 aaPredicted RBP13.57□□□□□ -0.24
CIT-217ENST00000545913 MIS18AQ9NYP9 233 aa13.57□□□□□ -0.24
CIT-217ENST00000545913 TTC21BQ7Z4L5 1316 aa13.57□□□□□ -0.24
CIT-217ENST00000545913 RARSP54136 660 aaKnown RBP13.57□□□□□ -0.24
CIT-217ENST00000545913 SSH1Q8WYL5 1049 aa13.57□□□□□ -0.24
CIT-217ENST00000545913 PYM1Q9BRP8 204 aaKnown RBP13.57□□□□□ -0.24
CIT-217ENST00000545913 PTCD1O75127 700 aaKnown RBP13.56□□□□□ -0.24
CIT-217ENST00000545913 TTF1Q15361 905 aaPredicted RBP13.56□□□□□ -0.24
CIT-217ENST00000545913 WDHD1O75717 1129 aaPredicted RBP13.56□□□□□ -0.24
CIT-217ENST00000545913 CCDC12Q8WUD4 166 aaPredicted RBP13.56□□□□□ -0.24
CIT-217ENST00000545913 LIMCH1Q9UPQ0 1083 aa13.56□□□□□ -0.24
CIT-217ENST00000545913 MYD88Q99836 296 aa13.56□□□□□ -0.24
CIT-217ENST00000545913 XPCQ01831 940 aaPredicted RBP13.56□□□□□ -0.24
CIT-217ENST00000545913 IL27Q8NEV9 243 aa13.56□□□□□ -0.24
CIT-217ENST00000545913 LRPPRCP42704 1394 aaKnown RBP13.56□□□□□ -0.24
CIT-217ENST00000545913 USO1O60763 962 aaKnown RBP13.56□□□□□ -0.24
CIT-217ENST00000545913 DBF4Q9UBU7 674 aaPredicted RBP13.56□□□□□ -0.24
CIT-217ENST00000545913 CETN1Q12798 172 aa13.55□□□□□ -0.24
CIT-217ENST00000545913 EVI5LQ96CN4 794 aa13.55□□□□□ -0.24
CIT-217ENST00000545913 MAP2K1Q02750 393 aaPredicted RBP13.55□□□□□ -0.24
CIT-217ENST00000545913 SHTN1A0MZ66 631 aa13.55□□□□□ -0.24
CIT-217ENST00000545913 GOLGA8BA8MQT2 603 aa13.55□□□□□ -0.24
CIT-217ENST00000545913 RPGRQ92834 1020 aaKnown RBP13.55□□□□□ -0.24
CIT-217ENST00000545913 NUP88Q99567 741 aaPredicted RBP13.55□□□□□ -0.24
CIT-217ENST00000545913 CNNM3Q8NE01 707 aa13.55□□□□□ -0.24
CIT-217ENST00000545913 NEMFO60524 1076 aa13.55□□□□□ -0.24
CIT-217ENST00000545913 KIF5BP33176 963 aa13.55□□□□□ -0.24
CIT-217ENST00000545913 GSDMDP57764 484 aa13.55□□□□□ -0.24
CIT-217ENST00000545913 LUZP1Q86V48 1076 aa13.55□□□□□ -0.24
CIT-217ENST00000545913 RANBP6O60518 1105 aaKnown RBP13.55□□□□□ -0.24
CIT-217ENST00000545913 PIP4K2BP78356 416 aa13.54□□□□□ -0.24
CIT-217ENST00000545913 TAOK3Q9H2K8 898 aa13.54□□□□□ -0.24
CIT-217ENST00000545913 ABCA10Q8WWZ4 1543 aa13.54□□□□□ -0.24
CIT-217ENST00000545913 AMPD3Q01432 767 aa13.54□□□□□ -0.24
CIT-217ENST00000545913 SCAF11Q99590 1463 aaKnown RBP13.54□□□□□ -0.24
CIT-217ENST00000545913 ANKRD18BA2A2Z9 1011 aa13.54□□□□□ -0.24
CIT-217ENST00000545913 CD109Q6YHK3 1445 aa13.54□□□□□ -0.24
CIT-217ENST00000545913 GCOM1H8Y6P7 765 aaPredicted RBP13.54□□□□□ -0.24
CIT-217ENST00000545913 MYZAPP0CAP1 466 aa13.54□□□□□ -0.24
CIT-217ENST00000545913 CLIP2Q9UDT6 1046 aa13.54□□□□□ -0.24
CIT-217ENST00000545913 FERMT3Q86UX7 667 aa13.54□□□□□ -0.24
CIT-217ENST00000545913 DNAAF4Q8WXU2 420 aa13.54□□□□□ -0.24
CIT-217ENST00000545913 CCDC194A0A1B0GVG4 234 aa13.54□□□□□ -0.24
CIT-217ENST00000545913 CCDC96Q2M329 555 aa13.54□□□□□ -0.24
CIT-217ENST00000545913 BIVM-ERCC5R4GMW8 1640 aa13.53□□□□□ -0.24
CIT-217ENST00000545913 CAVIN2O95810 425 aa13.53□□□□□ -0.24
CIT-217ENST00000545913 PAFAH1B1P43034 410 aa13.53□□□□□ -0.24
CIT-217ENST00000545913 STX1AQ16623 288 aa13.53□□□□□ -0.24
CIT-217ENST00000545913 KANK3Q6NY19 840 aa13.53□□□□□ -0.24
CIT-217ENST00000545913 RALGAPBQ86X10 1494 aa13.53□□□□□ -0.24
CIT-217ENST00000545913 IFIT3O14879 490 aaKnown RBP13.53□□□□□ -0.24
CIT-217ENST00000545913 SMARCA5O60264 1052 aaPredicted RBP13.53□□□□□ -0.24
CIT-217ENST00000545913 SCLT1Q96NL6 688 aa13.53□□□□□ -0.24
CIT-217ENST00000545913 UBA5Q9GZZ9 404 aa13.53□□□□□ -0.24
CIT-217ENST00000545913 DDX19AQ9NUU7 478 aaKnown RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms