RNA–Protein interactions for RNA: ENST00000545493.1

SCARB1-210, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-210ENST00000545493 ZNF496Q96IT1 587 aaPredicted RBP28.26■■■□□ 2.11
SCARB1-210ENST00000545493 NRXN2Q9P2S2 1712 aa28.26■■■□□ 2.11
SCARB1-210ENST00000545493 AFDNP55196 1824 aaKnown RBP28.25■■■□□ 2.11
SCARB1-210ENST00000545493 USPL1Q5W0Q7 1092 aa28.25■■■□□ 2.11
SCARB1-210ENST00000545493 TGFB2P61812 414 aa28.24■■■□□ 2.11
SCARB1-210ENST00000545493 ATP10DQ9P241 1426 aa28.24■■■□□ 2.11
SCARB1-210ENST00000545493 FCHSD2O94868 740 aa28.23■■■□□ 2.11
SCARB1-210ENST00000545493 DLG5Q8TDM6 1919 aa28.22■■■□□ 2.11
SCARB1-210ENST00000545493 POLRMTO00411 1230 aaKnown RBP28.22■■■□□ 2.11
SCARB1-210ENST00000545493 ARFGEF1Q9Y6D6 1849 aa28.21■■■□□ 2.11
SCARB1-210ENST00000545493 ZPR1O75312 459 aa28.21■■■□□ 2.11
SCARB1-210ENST00000545493 NARFQ9UHQ1 456 aa28.21■■■□□ 2.11
SCARB1-210ENST00000545493 A0A0G2JLW4 131 aa28.2■■■□□ 2.1
SCARB1-210ENST00000545493 KCNQ3O43525 872 aa28.2■■■□□ 2.1
SCARB1-210ENST00000545493 DPEP1P16444 411 aa28.2■■■□□ 2.1
SCARB1-210ENST00000545493 BCL2L12Q9HB09 334 aa28.2■■■□□ 2.1
SCARB1-210ENST00000545493 CANXP27824 592 aaKnown RBP28.19■■■□□ 2.1
SCARB1-210ENST00000545493 TM4SF1P30408 202 aa28.19■■■□□ 2.1
SCARB1-210ENST00000545493 MCM10Q7L590 875 aa28.19■■■□□ 2.1
SCARB1-210ENST00000545493 BCORQ6W2J9 1755 aa28.19■■■□□ 2.1
SCARB1-210ENST00000545493 BTBD11A6QL63 1104 aa28.18■■■□□ 2.1
SCARB1-210ENST00000545493 STARD3NLO95772 234 aa28.18■■■□□ 2.1
SCARB1-210ENST00000545493 FMNL2Q96PY5 1086 aa28.18■■■□□ 2.1
SCARB1-210ENST00000545493 EIF5P55010 431 aaKnown RBP28.17■■■□□ 2.1
SCARB1-210ENST00000545493 DLEC1Q9Y238 1755 aa28.16■■■□□ 2.1
SCARB1-210ENST00000545493 KCNA3P22001 575 aa28.16■■■□□ 2.1
SCARB1-210ENST00000545493 BCS1LQ9Y276 419 aa28.16■■■□□ 2.1
SCARB1-210ENST00000545493 KDM3BQ7LBC6 1761 aa28.15■■■□□ 2.1
SCARB1-210ENST00000545493 DCTN1Q14203 1278 aa28.15■■■□□ 2.1
SCARB1-210ENST00000545493 NFIXQ14938 502 aa28.15■■■□□ 2.1
SCARB1-210ENST00000545493 LAMB4A4D0S4 1761 aa28.14■■■□□ 2.1
SCARB1-210ENST00000545493 RTF1Q92541 710 aaKnown RBP28.14■■■□□ 2.1
SCARB1-210ENST00000545493 TEX13AQ9BXU3 409 aaPredicted RBP28.13■■■□□ 2.09
SCARB1-210ENST00000545493 GIGYF1O75420 1035 aaPredicted RBP28.12■■■□□ 2.09
SCARB1-210ENST00000545493 CARMIL3Q8ND23 1372 aa28.11■■■□□ 2.09
SCARB1-210ENST00000545493 PLEKHF1Q96S99 279 aa28.11■■■□□ 2.09
SCARB1-210ENST00000545493 PRAMEF22A3QJZ6 481 aa28.1■■■□□ 2.09
SCARB1-210ENST00000545493 HTATSF1O43719 755 aaKnown RBP28.1■■■□□ 2.09
SCARB1-210ENST00000545493 IL6STP40189 918 aaPredicted RBP28.1■■■□□ 2.09
SCARB1-210ENST00000545493 C1QTNF8P60827 252 aa28.1■■■□□ 2.09
SCARB1-210ENST00000545493 ANKRD31Q8N7Z5 1873 aa28.09■■■□□ 2.09
SCARB1-210ENST00000545493 A0A087WZG4 1122 aa28.09■■■□□ 2.09
SCARB1-210ENST00000545493 A1BGP04217 495 aa28.09■■■□□ 2.09
SCARB1-210ENST00000545493 CHRNA5P30532 468 aa28.09■■■□□ 2.09
SCARB1-210ENST00000545493 ZNF330Q9Y3S2 320 aaPredicted RBP28.08■■■□□ 2.09
SCARB1-210ENST00000545493 COL11A2P13942 1736 aaPredicted RBP28.07■■■□□ 2.08
SCARB1-210ENST00000545493 SERPINB2P05120 415 aa28.06■■■□□ 2.08
SCARB1-210ENST00000545493 PIM2Q9P1W9 311 aa28.06■■■□□ 2.08
SCARB1-210ENST00000545493 USP16Q9Y5T5 823 aa28.06■■■□□ 2.08
SCARB1-210ENST00000545493 RALBP1Q15311 655 aa28.05■■■□□ 2.08
SCARB1-210ENST00000545493 TBC1D2BQ9UPU7 963 aa28.05■■■□□ 2.08
SCARB1-210ENST00000545493 PIP4K2AP48426 406 aaPredicted RBP28.04■■■□□ 2.08
SCARB1-210ENST00000545493 TBC1D9BQ66K14 1250 aa28.04■■■□□ 2.08
SCARB1-210ENST00000545493 BICDL1Q6ZP65 573 aa28.04■■■□□ 2.08
SCARB1-210ENST00000545493 CAMTA2O94983 1202 aa28.03■■■□□ 2.08
SCARB1-210ENST00000545493 DDX10Q13206 875 aaKnown RBP28.03■■■□□ 2.08
SCARB1-210ENST00000545493 NFE2L2Q16236 605 aa28.03■■■□□ 2.08
SCARB1-210ENST00000545493 DALRD3Q5D0E6 543 aaKnown RBP28.03■■■□□ 2.08
SCARB1-210ENST00000545493 ZNF526Q8TF50 670 aaPredicted RBP28.03■■■□□ 2.08
SCARB1-210ENST00000545493 GPBP1L1Q9HC44 474 aaPredicted RBP28.03■■■□□ 2.08
SCARB1-210ENST00000545493 NEFMP07197 916 aa28.02■■■□□ 2.08
SCARB1-210ENST00000545493 SNRPA1P09661 255 aaKnown RBP28.02■■■□□ 2.08
SCARB1-210ENST00000545493 TAF7Q15545 349 aaPredicted RBP28.01■■■□□ 2.07
SCARB1-210ENST00000545493 ARHGAP27Q6ZUM4 889 aa28.01■■■□□ 2.07
SCARB1-210ENST00000545493 MAPK8IP3Q9UPT6 1336 aa28■■■□□ 2.07
SCARB1-210ENST00000545493 MIS18AQ9NYP9 233 aa28■■■□□ 2.07
SCARB1-210ENST00000545493 THUMPD2Q9BTF0 503 aaKnown RBP27.99■■■□□ 2.07
SCARB1-210ENST00000545493 MYBBP1AQ9BQG0 1328 aaKnown RBP27.98■■■□□ 2.07
SCARB1-210ENST00000545493 DZIP3Q86Y13 1208 aaKnown RBP27.98■■■□□ 2.07
SCARB1-210ENST00000545493 NBPF26B4DH59 902 aa27.97■■■□□ 2.07
SCARB1-210ENST00000545493 NBPF10Q6P3W6 841 aaKnown RBP27.97■■■□□ 2.07
SCARB1-210ENST00000545493 NBPF15Q8N660 670 aa27.97■■■□□ 2.07
SCARB1-210ENST00000545493 SBF1O95248 1867 aa27.97■■■□□ 2.07
SCARB1-210ENST00000545493 SENP3-EIF4A1A0A087X0R7 540 aa27.96■■■□□ 2.07
SCARB1-210ENST00000545493 PRR5LQ6MZQ0 368 aa27.96■■■□□ 2.07
SCARB1-210ENST00000545493 CEP350Q5VT06 3117 aa27.95■■■□□ 2.07
SCARB1-210ENST00000545493 NPM2Q86SE8 214 aaKnown RBP27.94■■■□□ 2.06
SCARB1-210ENST00000545493 C2CD5Q86YS7 1000 aa27.94■■■□□ 2.06
SCARB1-210ENST00000545493 PNNQ9H307 717 aaKnown RBP27.94■■■□□ 2.06
SCARB1-210ENST00000545493 CCDC24Q8N4L8 307 aa27.93■■■□□ 2.06
SCARB1-210ENST00000545493 PNISRQ8TF01 805 aaKnown RBP27.93■■■□□ 2.06
SCARB1-210ENST00000545493 ARFGEF2Q9Y6D5 1785 aa27.92■■■□□ 2.06
SCARB1-210ENST00000545493 C9orf131Q5VYM1 1079 aa27.92■■■□□ 2.06
SCARB1-210ENST00000545493 KIF3CO14782 793 aa27.91■■■□□ 2.06
SCARB1-210ENST00000545493 EIF4A1P60842 406 aaKnown RBP27.91■■■□□ 2.06
SCARB1-210ENST00000545493 TIAM2Q8IVF5 1701 aa27.91■■■□□ 2.06
SCARB1-210ENST00000545493 CACNA1SQ13698 1873 aa27.91■■■□□ 2.06
SCARB1-210ENST00000545493 CNBD1Q8NA66 436 aa27.9■■■□□ 2.06
SCARB1-210ENST00000545493 SETDB2Q96T68 719 aa27.9■■■□□ 2.06
SCARB1-210ENST00000545493 RASSF7Q02833 373 aa27.89■■■□□ 2.06
SCARB1-210ENST00000545493 BRIP1Q9BX63 1249 aa27.89■■■□□ 2.06
SCARB1-210ENST00000545493 H0YIN7 160 aa27.88■■■□□ 2.05
SCARB1-210ENST00000545493 TTLL6Q8N841 843 aa27.88■■■□□ 2.05
SCARB1-210ENST00000545493 CLEC4GQ6UXB4 293 aa27.87■■■□□ 2.05
SCARB1-210ENST00000545493 RNF181Q9P0P0 153 aa27.87■■■□□ 2.05
SCARB1-210ENST00000545493 ZNF652Q9Y2D9 606 aa27.86■■■□□ 2.05
SCARB1-210ENST00000545493 TNRC6CQ9HCJ0 1690 aaKnown RBP27.86■■■□□ 2.05
SCARB1-210ENST00000545493 RGL2O15211 777 aa27.85■■■□□ 2.05
SCARB1-210ENST00000545493 PDE6BP35913 854 aa27.85■■■□□ 2.05
SCARB1-210ENST00000545493 PRELPP51888 382 aa27.85■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms