RNA–Protein interactions for RNA: ENST00000545450.6

MSLN-202, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-202ENST00000545450 NASPP49321 788 aaPredicted RBP23.1■■□□□ 1.29
MSLN-202ENST00000545450 PTPRCP08575 1304 aa23.09■■□□□ 1.29
MSLN-202ENST00000545450 G2E3Q7L622 706 aa23.09■■□□□ 1.29
MSLN-202ENST00000545450 SOS1Q07889 1333 aaPredicted RBP23.09■■□□□ 1.29
MSLN-202ENST00000545450 PARP4Q9UKK3 1724 aaKnown RBP23.09■■□□□ 1.29
MSLN-202ENST00000545450 BTBD11A6QL63 1104 aa23.08■■□□□ 1.29
MSLN-202ENST00000545450 EIF4A1P60842 406 aaKnown RBP23.08■■□□□ 1.29
MSLN-202ENST00000545450 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.08■■□□□ 1.29
MSLN-202ENST00000545450 DDX49Q9Y6V7 483 aaKnown RBP23.08■■□□□ 1.29
MSLN-202ENST00000545450 KDM6AO15550 1401 aaPredicted RBP23.08■■□□□ 1.29
MSLN-202ENST00000545450 PLEKHG2Q9H7P9 1386 aa23.08■■□□□ 1.29
MSLN-202ENST00000545450 GSPT1P15170 499 aaKnown RBP23.08■■□□□ 1.29
MSLN-202ENST00000545450 RABEP1Q15276 862 aa23.08■■□□□ 1.29
MSLN-202ENST00000545450 NECTIN2Q92692 538 aa23.08■■□□□ 1.29
MSLN-202ENST00000545450 SPG7Q9UQ90 795 aa23.08■■□□□ 1.29
MSLN-202ENST00000545450 TPM2P07951 284 aa23.07■■□□□ 1.28
MSLN-202ENST00000545450 PHKG2P15735 406 aa23.07■■□□□ 1.28
MSLN-202ENST00000545450 CCDC30Q5VVM6 783 aa23.07■■□□□ 1.28
MSLN-202ENST00000545450 PLEKHM2Q8IWE5 1019 aa23.06■■□□□ 1.28
MSLN-202ENST00000545450 STK31Q9BXU1 1019 aa23.06■■□□□ 1.28
MSLN-202ENST00000545450 ZNF445P59923 1031 aa23.06■■□□□ 1.28
MSLN-202ENST00000545450 INTS3Q68E01 1043 aaKnown RBP23.06■■□□□ 1.28
MSLN-202ENST00000545450 TOM1L2Q6ZVM7 507 aa23.06■■□□□ 1.28
MSLN-202ENST00000545450 ZSCAN30Q86W11 494 aa23.06■■□□□ 1.28
MSLN-202ENST00000545450 COL22A1Q8NFW1 1626 aaPredicted RBP23.05■■□□□ 1.28
MSLN-202ENST00000545450 NUCB2P80303 420 aa23.04■■□□□ 1.28
MSLN-202ENST00000545450 CYP27B1O15528 508 aa23.04■■□□□ 1.28
MSLN-202ENST00000545450 CYP2E1P05181 493 aaPredicted RBP23.04■■□□□ 1.28
MSLN-202ENST00000545450 ANP32BQ92688 251 aaKnown RBP23.04■■□□□ 1.28
MSLN-202ENST00000545450 DCTPP1Q9H773 170 aa23.04■■□□□ 1.28
MSLN-202ENST00000545450 IFNL2Q8IZJ0 200 aa23.03■■□□□ 1.28
MSLN-202ENST00000545450 HDGFL1Q5TGJ6 251 aa23.03■■□□□ 1.28
MSLN-202ENST00000545450 TTC22Q5TAA0 569 aa23.02■■□□□ 1.28
MSLN-202ENST00000545450 USP26Q9BXU7 913 aa23.02■■□□□ 1.28
MSLN-202ENST00000545450 STRN4Q9NRL3 753 aa23.02■■□□□ 1.28
MSLN-202ENST00000545450 LARP1Q6PKG0 1096 aaKnown RBP23.01■■□□□ 1.27
MSLN-202ENST00000545450 PHLPP1O60346 1717 aa23.01■■□□□ 1.27
MSLN-202ENST00000545450 HOXB7P09629 217 aa23.01■■□□□ 1.27
MSLN-202ENST00000545450 FLIIQ13045 1269 aa23.01■■□□□ 1.27
MSLN-202ENST00000545450 SHANK3Q9BYB0 1731 aa23.01■■□□□ 1.27
MSLN-202ENST00000545450 COL16A1Q07092 1604 aaPredicted RBP23.01■■□□□ 1.27
MSLN-202ENST00000545450 F6X3S4 739 aa23■■□□□ 1.27
MSLN-202ENST00000545450 CARD10Q9BWT7 1032 aa23■■□□□ 1.27
MSLN-202ENST00000545450 LMBRD1Q9NUN5 540 aa23■■□□□ 1.27
MSLN-202ENST00000545450 MRC1P22897 1456 aa23■■□□□ 1.27
MSLN-202ENST00000545450 SLC52A2Q9HAB3 445 aa23■■□□□ 1.27
MSLN-202ENST00000545450 N4BP2Q86UW6 1770 aaPredicted RBP23■■□□□ 1.27
MSLN-202ENST00000545450 HEG1Q9ULI3 1381 aa22.99■■□□□ 1.27
MSLN-202ENST00000545450 MCTP1Q6DN14 999 aa22.99■■□□□ 1.27
MSLN-202ENST00000545450 COL14A1Q05707 1796 aaKnown RBP22.99■■□□□ 1.27
MSLN-202ENST00000545450 OFD1O75665 1012 aa22.99■■□□□ 1.27
MSLN-202ENST00000545450 EIF2S2P20042 333 aaKnown RBP22.99■■□□□ 1.27
MSLN-202ENST00000545450 HS1BP3Q53T59 392 aa22.99■■□□□ 1.27
MSLN-202ENST00000545450 CWC22Q9HCG8 908 aaKnown RBP22.99■■□□□ 1.27
MSLN-202ENST00000545450 EVA1CP58658 441 aa22.97■■□□□ 1.27
MSLN-202ENST00000545450 ZSCAN23Q3MJ62 389 aa22.97■■□□□ 1.27
MSLN-202ENST00000545450 KIAA1211Q6ZU35 1233 aa22.97■■□□□ 1.27
MSLN-202ENST00000545450 FKBP5Q13451 457 aaPredicted RBP22.97■■□□□ 1.27
MSLN-202ENST00000545450 DCAF5Q96JK2 942 aa22.97■■□□□ 1.27
MSLN-202ENST00000545450 C5P01031 1676 aa22.96■■□□□ 1.27
MSLN-202ENST00000545450 SLC4A10Q6U841 1118 aa22.96■■□□□ 1.27
MSLN-202ENST00000545450 NFATC2IPQ8NCF5 419 aa22.96■■□□□ 1.27
MSLN-202ENST00000545450 GIGYF1O75420 1035 aaPredicted RBP22.96■■□□□ 1.27
MSLN-202ENST00000545450 PHAXQ9H814 394 aaKnown RBP22.96■■□□□ 1.27
MSLN-202ENST00000545450 BTG4Q9NY30 223 aa22.96■■□□□ 1.27
MSLN-202ENST00000545450 SLC39A6Q13433 755 aa22.95■■□□□ 1.26
MSLN-202ENST00000545450 CAVIN1Q6NZI2 390 aaKnown RBP22.95■■□□□ 1.26
MSLN-202ENST00000545450 C16orf71Q8IYS4 520 aaPredicted RBP22.95■■□□□ 1.26
MSLN-202ENST00000545450 CHPF2Q9P2E5 772 aa22.95■■□□□ 1.26
MSLN-202ENST00000545450 PRAMEF22A3QJZ6 481 aa22.94■■□□□ 1.26
MSLN-202ENST00000545450 IL2RBP14784 551 aa22.94■■□□□ 1.26
MSLN-202ENST00000545450 MSNP26038 577 aaKnown RBP22.94■■□□□ 1.26
MSLN-202ENST00000545450 VSIG10Q8N0Z9 540 aa22.94■■□□□ 1.26
MSLN-202ENST00000545450 ANKRD44Q8N8A2 993 aa22.94■■□□□ 1.26
MSLN-202ENST00000545450 ZCRB1Q8TBF4 217 aaKnown RBP22.94■■□□□ 1.26
MSLN-202ENST00000545450 TERF1P54274 439 aa22.94■■□□□ 1.26
MSLN-202ENST00000545450 PKP1Q13835 747 aa22.94■■□□□ 1.26
MSLN-202ENST00000545450 ZNF790Q6PG37 636 aa22.94■■□□□ 1.26
MSLN-202ENST00000545450 PCDH11XQ9BZA7 1347 aa22.94■■□□□ 1.26
MSLN-202ENST00000545450 PCDH11YQ9BZA8 1340 aa22.94■■□□□ 1.26
MSLN-202ENST00000545450 PDLIM2Q96JY6 352 aa22.93■■□□□ 1.26
MSLN-202ENST00000545450 MEIS3Q99687 375 aa22.93■■□□□ 1.26
MSLN-202ENST00000545450 CCT4P50991 539 aaKnown RBP22.93■■□□□ 1.26
MSLN-202ENST00000545450 ATP10DQ9P241 1426 aa22.93■■□□□ 1.26
MSLN-202ENST00000545450 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.92■■□□□ 1.26
MSLN-202ENST00000545450 RPAP2Q8IXW5 612 aaPredicted RBP22.92■■□□□ 1.26
MSLN-202ENST00000545450 RBSNQ9H1K0 784 aa22.92■■□□□ 1.26
MSLN-202ENST00000545450 NCLP19338 710 aaKnown RBP22.91■■□□□ 1.26
MSLN-202ENST00000545450 PDCL3Q9H2J4 239 aa22.91■■□□□ 1.26
MSLN-202ENST00000545450 ST18O60284 1047 aa22.91■■□□□ 1.26
MSLN-202ENST00000545450 ANXA1P04083 346 aa22.91■■□□□ 1.26
MSLN-202ENST00000545450 SDSP20132 328 aa22.91■■□□□ 1.26
MSLN-202ENST00000545450 PXDNLA1KZ92 1463 aa22.91■■□□□ 1.26
MSLN-202ENST00000545450 NOL7Q9UMY1 257 aaKnown RBP22.9■■□□□ 1.26
MSLN-202ENST00000545450 PLCH1Q4KWH8 1693 aa22.9■■□□□ 1.26
MSLN-202ENST00000545450 PIP4K2BP78356 416 aa22.9■■□□□ 1.26
MSLN-202ENST00000545450 CASC1Q6TDU7 716 aa22.9■■□□□ 1.26
MSLN-202ENST00000545450 OTUD7AQ8TE49 926 aaPredicted RBP22.9■■□□□ 1.26
MSLN-202ENST00000545450 CHMP4AQ9BY43 222 aa22.9■■□□□ 1.26
MSLN-202ENST00000545450 ZMYND15Q9H091 742 aa22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms