RNA–Protein interactions for RNA: ENST00000545445.1

LTBR-214, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 379 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-214ENST00000545445 GYS1P13807 737 aa15.58■□□□□ 0.08
LTBR-214ENST00000545445 PRELPP51888 382 aa15.58■□□□□ 0.08
LTBR-214ENST00000545445 NFE2L2Q16236 605 aa15.58■□□□□ 0.08
LTBR-214ENST00000545445 NCBP3Q53F19 620 aaKnown RBP15.58■□□□□ 0.08
LTBR-214ENST00000545445 AKAP4Q5JQC9 854 aa15.58■□□□□ 0.08
LTBR-214ENST00000545445 CCDC146Q8IYE0 955 aa15.58■□□□□ 0.08
LTBR-214ENST00000545445 NGEFQ8N5V2 710 aa15.58■□□□□ 0.08
LTBR-214ENST00000545445 ARHGEF1Q92888 912 aaKnown RBP15.58■□□□□ 0.08
LTBR-214ENST00000545445 RNF181Q9P0P0 153 aa15.58■□□□□ 0.08
LTBR-214ENST00000545445 KDM2BQ8NHM5 1336 aa15.58■□□□□ 0.08
LTBR-214ENST00000545445 HTATSF1O43719 755 aaKnown RBP15.57■□□□□ 0.08
LTBR-214ENST00000545445 PHKG2P15735 406 aa15.57■□□□□ 0.08
LTBR-214ENST00000545445 KCNA3P22001 575 aa15.57■□□□□ 0.08
LTBR-214ENST00000545445 SLC4A9Q96Q91 983 aa15.57■□□□□ 0.08
LTBR-214ENST00000545445 RRAGCQ9HB90 399 aa15.57■□□□□ 0.08
LTBR-214ENST00000545445 PARP3Q9Y6F1 533 aa15.57■□□□□ 0.08
LTBR-214ENST00000545445 TMPOP42166 694 aaKnown RBP15.56■□□□□ 0.08
LTBR-214ENST00000545445 LMOD3Q0VAK6 560 aa15.56■□□□□ 0.08
LTBR-214ENST00000545445 DCAF5Q96JK2 942 aa15.56■□□□□ 0.08
LTBR-214ENST00000545445 RBM42Q9BTD8 480 aaKnown RBP15.56■□□□□ 0.08
LTBR-214ENST00000545445 BRCA1P38398 1863 aaKnown RBP15.56■□□□□ 0.08
LTBR-214ENST00000545445 GNAT3A8MTJ3 354 aa15.55■□□□□ 0.08
LTBR-214ENST00000545445 APAF1O14727 1248 aa15.55■□□□□ 0.08
LTBR-214ENST00000545445 ADRA2BP18089 450 aa15.55■□□□□ 0.08
LTBR-214ENST00000545445 RFC4P35249 363 aa15.55■□□□□ 0.08
LTBR-214ENST00000545445 CNTNAP4Q9C0A0 1308 aa15.54■□□□□ 0.08
LTBR-214ENST00000545445 DALRD3Q5D0E6 543 aaKnown RBP15.54■□□□□ 0.08
LTBR-214ENST00000545445 RTF1Q92541 710 aaKnown RBP15.54■□□□□ 0.08
LTBR-214ENST00000545445 PIM2Q9P1W9 311 aa15.54■□□□□ 0.08
LTBR-214ENST00000545445 HSPA1AP0DMV8 641 aaKnown RBP15.53■□□□□ 0.08
LTBR-214ENST00000545445 HSPA1BP0DMV9 641 aaKnown RBP15.53■□□□□ 0.08
LTBR-214ENST00000545445 RIPK4P57078 832 aa15.53■□□□□ 0.08
LTBR-214ENST00000545445 SMC1BQ8NDV3 1235 aa15.53■□□□□ 0.08
LTBR-214ENST00000545445 TNRC6CQ9HCJ0 1690 aaKnown RBP15.53■□□□□ 0.08
LTBR-214ENST00000545445 ARFGEF1Q9Y6D6 1849 aa15.52■□□□□ 0.08
LTBR-214ENST00000545445 RPS6KA4O75676 772 aa15.52■□□□□ 0.08
LTBR-214ENST00000545445 CHRNA5P30532 468 aa15.52■□□□□ 0.08
LTBR-214ENST00000545445 DDR1Q08345 913 aa15.52■□□□□ 0.08
LTBR-214ENST00000545445 CCDC27Q2M243 656 aa15.52■□□□□ 0.08
LTBR-214ENST00000545445 RC3H1Q5TC82 1133 aaKnown RBP15.52■□□□□ 0.08
LTBR-214ENST00000545445 SRP68Q9UHB9 627 aaKnown RBP15.52■□□□□ 0.08
LTBR-214ENST00000545445 COL5A3P25940 1745 aaPredicted RBP15.51■□□□□ 0.07
LTBR-214ENST00000545445 ERVV-2B6SEH9 535 aa15.51■□□□□ 0.07
LTBR-214ENST00000545445 RASSF7Q02833 373 aa15.51■□□□□ 0.07
LTBR-214ENST00000545445 FKBP8Q14318 412 aa15.5■□□□□ 0.07
LTBR-214ENST00000545445 ZNF831Q5JPB2 1677 aa15.49■□□□□ 0.07
LTBR-214ENST00000545445 RNMTO43148 476 aaKnown RBP15.49■□□□□ 0.07
LTBR-214ENST00000545445 CALD1Q05682 793 aaKnown RBP15.49■□□□□ 0.07
LTBR-214ENST00000545445 NEUROD2Q15784 382 aa15.49■□□□□ 0.07
LTBR-214ENST00000545445 RRP7AQ9Y3A4 280 aaKnown RBP15.49■□□□□ 0.07
LTBR-214ENST00000545445 CEMIPQ8WUJ3 1361 aa15.49■□□□□ 0.07
LTBR-214ENST00000545445 USP42Q9H9J4 1324 aaKnown RBP15.48■□□□□ 0.07
LTBR-214ENST00000545445 IL17REQ8NFR9 667 aa15.48■□□□□ 0.07
LTBR-214ENST00000545445 KDM6AO15550 1401 aaPredicted RBP15.48■□□□□ 0.07
LTBR-214ENST00000545445 PTCD1O75127 700 aaKnown RBP15.47■□□□□ 0.07
LTBR-214ENST00000545445 TEFQ10587 303 aa15.47■□□□□ 0.07
LTBR-214ENST00000545445 TRIM35Q9UPQ4 493 aa15.47■□□□□ 0.07
LTBR-214ENST00000545445 CRKLP46109 303 aaKnown RBP15.46■□□□□ 0.07
LTBR-214ENST00000545445 CABP4P57796 275 aa15.46■□□□□ 0.07
LTBR-214ENST00000545445 MCM10Q7L590 875 aa15.46■□□□□ 0.07
LTBR-214ENST00000545445 LGR6Q9HBX8 967 aa15.46■□□□□ 0.07
LTBR-214ENST00000545445 ZC3H4Q9UPT8 1303 aaKnown RBP15.45■□□□□ 0.06
LTBR-214ENST00000545445 ADAMTS7Q9UKP4 1686 aa15.45■□□□□ 0.06
LTBR-214ENST00000545445 POLRMTO00411 1230 aaKnown RBP15.45■□□□□ 0.06
LTBR-214ENST00000545445 WDR63Q8IWG1 891 aa15.45■□□□□ 0.06
LTBR-214ENST00000545445 WWC1Q8IX03 1113 aa15.45■□□□□ 0.06
LTBR-214ENST00000545445 SLC52A2Q9HAB3 445 aa15.45■□□□□ 0.06
LTBR-214ENST00000545445 MYH14Q7Z406 1995 aaKnown RBP15.44■□□□□ 0.06
LTBR-214ENST00000545445 VEGFAP15692 232 aaPredicted RBP15.44■□□□□ 0.06
LTBR-214ENST00000545445 HNRNPUQ00839 825 aaKnown RBP eCLIP15.44■□□□□ 0.06
LTBR-214ENST00000545445 DCTN1Q14203 1278 aa15.44■□□□□ 0.06
LTBR-214ENST00000545445 TAF7Q15545 349 aaPredicted RBP15.44■□□□□ 0.06
LTBR-214ENST00000545445 BABAM1Q9NWV8 329 aa15.44■□□□□ 0.06
LTBR-214ENST00000545445 DLG5Q8TDM6 1919 aa15.43■□□□□ 0.06
LTBR-214ENST00000545445 GLTPD2A6NH11 291 aa15.43■□□□□ 0.06
LTBR-214ENST00000545445 LMNB1P20700 586 aa15.43■□□□□ 0.06
LTBR-214ENST00000545445 NFATC2IPQ8NCF5 419 aa15.43■□□□□ 0.06
LTBR-214ENST00000545445 MRC1P22897 1456 aa15.43■□□□□ 0.06
LTBR-214ENST00000545445 SCN11AQ9UI33 1791 aa15.43■□□□□ 0.06
LTBR-214ENST00000545445 IL16Q14005 1332 aa15.43■□□□□ 0.06
LTBR-214ENST00000545445 SBF1O95248 1867 aa15.42■□□□□ 0.06
LTBR-214ENST00000545445 SALL2Q9Y467 1007 aaPredicted RBP15.42■□□□□ 0.06
LTBR-214ENST00000545445 TJP1Q07157 1748 aa15.42■□□□□ 0.06
LTBR-214ENST00000545445 TM4SF1P30408 202 aa15.41■□□□□ 0.06
LTBR-214ENST00000545445 ZNF521Q96K83 1311 aa15.41■□□□□ 0.06
LTBR-214ENST00000545445 TIAM2Q8IVF5 1701 aa15.4■□□□□ 0.06
LTBR-214ENST00000545445 BTBD11A6QL63 1104 aa15.4■□□□□ 0.06
LTBR-214ENST00000545445 GNAI1P63096 354 aa15.4■□□□□ 0.06
LTBR-214ENST00000545445 USPL1Q5W0Q7 1092 aa15.4■□□□□ 0.06
LTBR-214ENST00000545445 INTS5Q6P9B9 1019 aaKnown RBP15.4■□□□□ 0.06
LTBR-214ENST00000545445 CFAP44Q96MT7 982 aa15.4■□□□□ 0.06
LTBR-214ENST00000545445 THUMPD2Q9BTF0 503 aaKnown RBP15.4■□□□□ 0.06
LTBR-214ENST00000545445 IFT57Q9NWB7 429 aa15.4■□□□□ 0.06
LTBR-214ENST00000545445 ZBED9Q6R2W3 1325 aa15.4■□□□□ 0.06
LTBR-214ENST00000545445 NFKBIEO00221 500 aa15.39■□□□□ 0.05
LTBR-214ENST00000545445 MKRN1Q9UHC7 482 aaKnown RBP15.39■□□□□ 0.05
LTBR-214ENST00000545445 POTECB2RU33 542 aa15.38■□□□□ 0.05
LTBR-214ENST00000545445 CHL1O00533 1208 aa15.38■□□□□ 0.05
LTBR-214ENST00000545445 ZPR1O75312 459 aa15.38■□□□□ 0.05
LTBR-214ENST00000545445 GOLGA2Q08379 1002 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms