RNA–Protein interactions for RNA: ENST00000545358.5

NPIPB3-214, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5

Gene NPIPB3, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-214ENST00000545358 THUMPD2Q9BTF0 503 aaKnown RBP6.99□□□□□ -1.29
NPIPB3-214ENST00000545358 BABAM1Q9NWV8 329 aa6.99□□□□□ -1.29
NPIPB3-214ENST00000545358 LAS1LQ9Y4W2 734 aaKnown RBP6.99□□□□□ -1.29
NPIPB3-214ENST00000545358 SOS1Q07889 1333 aaPredicted RBP6.99□□□□□ -1.29
NPIPB3-214ENST00000545358 PKD1L3Q7Z443 1732 aa6.98□□□□□ -1.29
NPIPB3-214ENST00000545358 PARP4Q9UKK3 1724 aaKnown RBP6.98□□□□□ -1.29
NPIPB3-214ENST00000545358 CEMIPQ8WUJ3 1361 aa6.98□□□□□ -1.29
NPIPB3-214ENST00000545358 KDM3BQ7LBC6 1761 aa6.98□□□□□ -1.29
NPIPB3-214ENST00000545358 GNAT3A8MTJ3 354 aa6.98□□□□□ -1.29
NPIPB3-214ENST00000545358 IPO8O15397 1037 aaKnown RBP6.98□□□□□ -1.29
NPIPB3-214ENST00000545358 CENPQQ7L2Z9 268 aaPredicted RBP6.98□□□□□ -1.29
NPIPB3-214ENST00000545358 FTSJ3Q8IY81 847 aaKnown RBP6.98□□□□□ -1.29
NPIPB3-214ENST00000545358 SSH1Q8WYL5 1049 aa6.98□□□□□ -1.29
NPIPB3-214ENST00000545358 FRAT1Q92837 279 aaPredicted RBP6.98□□□□□ -1.29
NPIPB3-214ENST00000545358 LTV1Q96GA3 475 aaPredicted RBP6.98□□□□□ -1.29
NPIPB3-214ENST00000545358 BCL2L13Q9BXK5 485 aa6.98□□□□□ -1.29
NPIPB3-214ENST00000545358 TSHZ2Q9NRE2 1034 aa6.98□□□□□ -1.29
NPIPB3-214ENST00000545358 SLAIN2Q9P270 581 aa6.98□□□□□ -1.29
NPIPB3-214ENST00000545358 KDM2BQ8NHM5 1336 aa6.98□□□□□ -1.29
NPIPB3-214ENST00000545358 COL22A1Q8NFW1 1626 aaPredicted RBP6.98□□□□□ -1.29
NPIPB3-214ENST00000545358 ROBO1Q9Y6N7 1651 aa6.97□□□□□ -1.29
NPIPB3-214ENST00000545358 VIRMAQ69YN4 1812 aaKnown RBP6.97□□□□□ -1.29
NPIPB3-214ENST00000545358 ZBTB7CA1YPR0 619 aa6.97□□□□□ -1.29
NPIPB3-214ENST00000545358 VAMP4O75379 141 aa6.97□□□□□ -1.29
NPIPB3-214ENST00000545358 TRIM27P14373 513 aa6.97□□□□□ -1.29
NPIPB3-214ENST00000545358 DCTN1Q14203 1278 aa6.97□□□□□ -1.29
NPIPB3-214ENST00000545358 MVPQ14764 893 aaKnown RBP6.97□□□□□ -1.29
NPIPB3-214ENST00000545358 TWISTNBQ3B726 338 aaPredicted RBP6.97□□□□□ -1.29
NPIPB3-214ENST00000545358 AMOTQ4VCS5 1084 aa6.97□□□□□ -1.29
NPIPB3-214ENST00000545358 NBPF6Q5VWK0 638 aa6.97□□□□□ -1.29
NPIPB3-214ENST00000545358 ATF7IPQ6VMQ6 1270 aa6.97□□□□□ -1.29
NPIPB3-214ENST00000545358 MCM10Q7L590 875 aa6.97□□□□□ -1.29
NPIPB3-214ENST00000545358 DZIP1LQ8IYY4 767 aaKnown RBP6.97□□□□□ -1.29
NPIPB3-214ENST00000545358 ZNF687Q8N1G0 1237 aa6.97□□□□□ -1.29
NPIPB3-214ENST00000545358 PANK1Q8TE04 598 aa6.97□□□□□ -1.29
NPIPB3-214ENST00000545358 ARHGAP45Q92619 1136 aa6.97□□□□□ -1.29
NPIPB3-214ENST00000545358 DDX17Q92841 729 aaKnown RBP6.97□□□□□ -1.29
NPIPB3-214ENST00000545358 CLUAP1Q96AJ1 413 aa6.97□□□□□ -1.29
NPIPB3-214ENST00000545358 NBPF4Q96M43 638 aa6.97□□□□□ -1.29
NPIPB3-214ENST00000545358 WDR70Q9NW82 654 aa6.97□□□□□ -1.29
NPIPB3-214ENST00000545358 SIPA1L3O60292 1781 aaPredicted RBP6.97□□□□□ -1.29
NPIPB3-214ENST00000545358 N4BP2Q86UW6 1770 aaPredicted RBP6.96□□□□□ -1.3
NPIPB3-214ENST00000545358 CAMK2BQ13554 666 aa6.96□□□□□ -1.3
NPIPB3-214ENST00000545358 PLEKHO1Q53GL0 409 aaPredicted RBP6.96□□□□□ -1.3
NPIPB3-214ENST00000545358 AKAP4Q5JQC9 854 aa6.96□□□□□ -1.3
NPIPB3-214ENST00000545358 MRPL50Q8N5N7 158 aaKnown RBP6.96□□□□□ -1.3
NPIPB3-214ENST00000545358 USHBP1Q8N6Y0 703 aa6.96□□□□□ -1.3
NPIPB3-214ENST00000545358 KHSRPQ92945 711 aaKnown RBP eCLIP6.96□□□□□ -1.3
NPIPB3-214ENST00000545358 CHMP4BQ9H444 224 aaKnown RBP6.96□□□□□ -1.3
NPIPB3-214ENST00000545358 TSPYL4Q9UJ04 414 aa6.96□□□□□ -1.3
NPIPB3-214ENST00000545358 DDX19BQ9UMR2 479 aa6.96□□□□□ -1.3
NPIPB3-214ENST00000545358 COG6Q9Y2V7 657 aa6.96□□□□□ -1.3
NPIPB3-214ENST00000545358 RLBP1P12271 317 aa6.95□□□□□ -1.3
NPIPB3-214ENST00000545358 PBX2P40425 430 aa6.95□□□□□ -1.3
NPIPB3-214ENST00000545358 ZC3H6P61129 1189 aaKnown RBP6.95□□□□□ -1.3
NPIPB3-214ENST00000545358 MAP3K9P80192 1104 aa6.95□□□□□ -1.3
NPIPB3-214ENST00000545358 ZNF530Q6P9A1 599 aaPredicted RBP6.95□□□□□ -1.3
NPIPB3-214ENST00000545358 TSPYL6Q8N831 410 aa6.95□□□□□ -1.3
NPIPB3-214ENST00000545358 UPF1Q92900 1129 aaKnown RBP eCLIP6.95□□□□□ -1.3
NPIPB3-214ENST00000545358 LRRC59Q96AG4 307 aaKnown RBP6.95□□□□□ -1.3
NPIPB3-214ENST00000545358 NOB1Q9ULX3 412 aaKnown RBP6.95□□□□□ -1.3
NPIPB3-214ENST00000545358 LHX6Q9UPM6 363 aa6.95□□□□□ -1.3
NPIPB3-214ENST00000545358 COL5A2P05997 1499 aaPredicted RBP6.95□□□□□ -1.3
NPIPB3-214ENST00000545358 MRC1P22897 1456 aa6.95□□□□□ -1.3
NPIPB3-214ENST00000545358 MEGF6O75095 1541 aa6.95□□□□□ -1.3
NPIPB3-214ENST00000545358 ABCC4O15439 1325 aa6.95□□□□□ -1.3
NPIPB3-214ENST00000545358 CACNA1FO60840 1977 aa6.95□□□□□ -1.3
NPIPB3-214ENST00000545358 SCN11AQ9UI33 1791 aa6.95□□□□□ -1.3
NPIPB3-214ENST00000545358 PLCH1Q4KWH8 1693 aa6.94□□□□□ -1.3
NPIPB3-214ENST00000545358 PXDNLA1KZ92 1463 aa6.94□□□□□ -1.3
NPIPB3-214ENST00000545358 POTEB3A0JP26 581 aa6.94□□□□□ -1.3
NPIPB3-214ENST00000545358 TCERG1O14776 1098 aaKnown RBP6.94□□□□□ -1.3
NPIPB3-214ENST00000545358 HOXB7P09629 217 aa6.94□□□□□ -1.3
NPIPB3-214ENST00000545358 PLCB2Q00722 1185 aa6.94□□□□□ -1.3
NPIPB3-214ENST00000545358 C1orf141Q5JVX7 400 aa6.94□□□□□ -1.3
NPIPB3-214ENST00000545358 POTEBQ6S5H4 581 aa6.94□□□□□ -1.3
NPIPB3-214ENST00000545358 ITPRIPQ8IWB1 547 aa6.94□□□□□ -1.3
NPIPB3-214ENST00000545358 C8orf58Q8NAV2 365 aa6.94□□□□□ -1.3
NPIPB3-214ENST00000545358 API5Q9BZZ5 524 aaKnown RBP6.94□□□□□ -1.3
NPIPB3-214ENST00000545358 AXIN2Q9Y2T1 843 aa6.94□□□□□ -1.3
NPIPB3-214ENST00000545358 COL14A1Q05707 1796 aaKnown RBP6.94□□□□□ -1.3
NPIPB3-214ENST00000545358 PTPRCP08575 1304 aa6.94□□□□□ -1.3
NPIPB3-214ENST00000545358 RGS12O14924 1447 aa6.93□□□□□ -1.3
NPIPB3-214ENST00000545358 TATP17735 454 aaPredicted RBP6.93□□□□□ -1.3
NPIPB3-214ENST00000545358 TAF7Q15545 349 aaPredicted RBP6.93□□□□□ -1.3
NPIPB3-214ENST00000545358 PPP4R3BQ5MIZ7 849 aa6.93□□□□□ -1.3
NPIPB3-214ENST00000545358 IL17REQ8NFR9 667 aa6.93□□□□□ -1.3
NPIPB3-214ENST00000545358 RAPGEF4Q8WZA2 1011 aa6.93□□□□□ -1.3
NPIPB3-214ENST00000545358 CHMP4AQ9BY43 222 aa6.93□□□□□ -1.3
NPIPB3-214ENST00000545358 PRDM11Q9NQV5 511 aa6.93□□□□□ -1.3
NPIPB3-214ENST00000545358 TNNQ9UQP3 1299 aa6.93□□□□□ -1.3
NPIPB3-214ENST00000545358 WDR17Q8IZU2 1322 aa6.93□□□□□ -1.3
NPIPB3-214ENST00000545358 COL16A1Q07092 1604 aaPredicted RBP6.93□□□□□ -1.3
NPIPB3-214ENST00000545358 RNMTO43148 476 aaKnown RBP6.92□□□□□ -1.3
NPIPB3-214ENST00000545358 CSB-PGBD3P0DP91 1061 aa6.92□□□□□ -1.3
NPIPB3-214ENST00000545358 TMEM57Q8N5G2 664 aa6.92□□□□□ -1.3
NPIPB3-214ENST00000545358 CABLES1Q8TDN4 633 aa6.92□□□□□ -1.3
NPIPB3-214ENST00000545358 ANO8Q9HCE9 1232 aaPredicted RBP6.92□□□□□ -1.3
NPIPB3-214ENST00000545358 NLRP2Q9NX02 1062 aa6.92□□□□□ -1.3
NPIPB3-214ENST00000545358 SPG7Q9UQ90 795 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms