RNA–Protein interactions for RNA: ENST00000545279.5

SMAD5-211, Transcript of SMAD family member 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD5, Length 7,012 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-211ENST00000545279 PICK1Q9NRD5 415 aa7.83□□□□□ -1.16
SMAD5-211ENST00000545279 PTPRMP28827 1452 aa7.83□□□□□ -1.16
SMAD5-211ENST00000545279 IDH1O75874 414 aaKnown RBP7.83□□□□□ -1.16
SMAD5-211ENST00000545279 ZNF444Q8N0Y2 327 aaPredicted RBP7.83□□□□□ -1.16
SMAD5-211ENST00000545279 PRKAG2Q9UGJ0 569 aa7.83□□□□□ -1.16
SMAD5-211ENST00000545279 ADRA2BP18089 450 aa7.83□□□□□ -1.16
SMAD5-211ENST00000545279 RFX1P22670 979 aa7.83□□□□□ -1.16
SMAD5-211ENST00000545279 EXOSC9Q06265 439 aaKnown RBP7.83□□□□□ -1.16
SMAD5-211ENST00000545279 USP48Q86UV5 1035 aa7.83□□□□□ -1.16
SMAD5-211ENST00000545279 PIM2Q9P1W9 311 aa7.83□□□□□ -1.16
SMAD5-211ENST00000545279 ALDH1L1O75891 902 aa7.82□□□□□ -1.16
SMAD5-211ENST00000545279 VPS72Q15906 364 aa7.82□□□□□ -1.16
SMAD5-211ENST00000545279 ATF5Q9Y2D1 282 aaPredicted RBP7.82□□□□□ -1.16
SMAD5-211ENST00000545279 CSADQ9Y600 493 aa7.82□□□□□ -1.16
SMAD5-211ENST00000545279 POLR3AO14802 1390 aaPredicted RBP7.82□□□□□ -1.16
SMAD5-211ENST00000545279 PPIP5K2O43314 1243 aa7.82□□□□□ -1.16
SMAD5-211ENST00000545279 RPAP2Q8IXW5 612 aaPredicted RBP7.82□□□□□ -1.16
SMAD5-211ENST00000545279 WDR17Q8IZU2 1322 aa7.82□□□□□ -1.16
SMAD5-211ENST00000545279 CCDC93Q567U6 631 aa7.82□□□□□ -1.16
SMAD5-211ENST00000545279 MPNDQ8N594 471 aa7.82□□□□□ -1.16
SMAD5-211ENST00000545279 MTMR7Q9Y216 660 aa7.82□□□□□ -1.16
SMAD5-211ENST00000545279 RTKN2Q8IZC4 609 aa7.82□□□□□ -1.16
SMAD5-211ENST00000545279 PAF1Q8N7H5 531 aa7.82□□□□□ -1.16
SMAD5-211ENST00000545279 ANKRD20A12PQ8NF67 263 aa7.82□□□□□ -1.16
SMAD5-211ENST00000545279 LPXNO60711 386 aa7.82□□□□□ -1.16
SMAD5-211ENST00000545279 CCDC85AQ96PX6 553 aaPredicted RBP7.82□□□□□ -1.16
SMAD5-211ENST00000545279 CRNKL1Q9BZJ0 848 aaKnown RBP7.82□□□□□ -1.16
SMAD5-211ENST00000545279 ABT1Q9ULW3 272 aaKnown RBP7.82□□□□□ -1.16
SMAD5-211ENST00000545279 PPP1R12BO60237 982 aaPredicted RBP7.82□□□□□ -1.16
SMAD5-211ENST00000545279 ABCA5Q8WWZ7 1642 aa7.82□□□□□ -1.16
SMAD5-211ENST00000545279 CDK5RAP3Q96JB5 506 aa7.81□□□□□ -1.16
SMAD5-211ENST00000545279 ARAP3Q8WWN8 1544 aa7.81□□□□□ -1.16
SMAD5-211ENST00000545279 SRGAP3O43295 1099 aa7.81□□□□□ -1.16
SMAD5-211ENST00000545279 SYAP1Q96A49 352 aaPredicted RBP7.81□□□□□ -1.16
SMAD5-211ENST00000545279 PZPP20742 1482 aa7.81□□□□□ -1.16
SMAD5-211ENST00000545279 FAM83GA6ND36 823 aa7.81□□□□□ -1.16
SMAD5-211ENST00000545279 TBC1D22AQ8WUA7 517 aa7.81□□□□□ -1.16
SMAD5-211ENST00000545279 LRRCC1Q9C099 1032 aa7.81□□□□□ -1.16
SMAD5-211ENST00000545279 SPC25Q9HBM1 224 aa7.81□□□□□ -1.16
SMAD5-211ENST00000545279 MCM10Q7L590 875 aa7.81□□□□□ -1.16
SMAD5-211ENST00000545279 TTC6Q86TZ1 520 aa7.81□□□□□ -1.16
SMAD5-211ENST00000545279 PTPRTO14522 1441 aa7.81□□□□□ -1.16
SMAD5-211ENST00000545279 RRP12Q5JTH9 1297 aaKnown RBP7.81□□□□□ -1.16
SMAD5-211ENST00000545279 SEC63Q9UGP8 760 aaKnown RBP7.81□□□□□ -1.16
SMAD5-211ENST00000545279 PNMA2Q9UL42 364 aa7.81□□□□□ -1.16
SMAD5-211ENST00000545279 FKBP4Q02790 459 aaKnown RBP eCLIP7.8□□□□□ -1.16
SMAD5-211ENST00000545279 PDE4BQ07343 736 aa7.8□□□□□ -1.16
SMAD5-211ENST00000545279 PDE3AQ14432 1141 aa7.8□□□□□ -1.16
SMAD5-211ENST00000545279 TRIM44Q96DX7 344 aaPredicted RBP7.8□□□□□ -1.16
SMAD5-211ENST00000545279 AS3MTQ9HBK9 375 aa7.8□□□□□ -1.16
SMAD5-211ENST00000545279 ERBB4Q15303 1308 aa7.8□□□□□ -1.16
SMAD5-211ENST00000545279 CDKL5O76039 1030 aa7.8□□□□□ -1.16
SMAD5-211ENST00000545279 UFL1O94874 794 aa7.8□□□□□ -1.16
SMAD5-211ENST00000545279 TXLNAP40222 546 aa7.8□□□□□ -1.16
SMAD5-211ENST00000545279 NOD1Q9Y239 953 aa7.8□□□□□ -1.16
SMAD5-211ENST00000545279 PTMAP06454 111 aaKnown RBP7.8□□□□□ -1.16
SMAD5-211ENST00000545279 SSFA2P28290 1259 aa7.8□□□□□ -1.16
SMAD5-211ENST00000545279 CCDC96Q2M329 555 aa7.8□□□□□ -1.16
SMAD5-211ENST00000545279 ARMC9Q7Z3E5 817 aa7.8□□□□□ -1.16
SMAD5-211ENST00000545279 NCOA3Q9Y6Q9 1424 aa7.8□□□□□ -1.16
SMAD5-211ENST00000545279 SPATA31A3Q5VYP0 1347 aa7.8□□□□□ -1.16
SMAD5-211ENST00000545279 DLGAP5Q15398 846 aa7.8□□□□□ -1.16
SMAD5-211ENST00000545279 WWC3Q9ULE0 1092 aa7.8□□□□□ -1.16
SMAD5-211ENST00000545279 CCDC69A6NI79 296 aa7.8□□□□□ -1.16
SMAD5-211ENST00000545279 KRT18P05783 430 aaKnown RBP7.8□□□□□ -1.16
SMAD5-211ENST00000545279 HSP90AB2PQ58FF8 381 aa7.8□□□□□ -1.16
SMAD5-211ENST00000545279 INTS3Q68E01 1043 aaKnown RBP7.79□□□□□ -1.16
SMAD5-211ENST00000545279 WASF1Q92558 559 aa7.79□□□□□ -1.16
SMAD5-211ENST00000545279 ZFYVE9O95405 1425 aa7.79□□□□□ -1.16
SMAD5-211ENST00000545279 PTPN23Q9H3S7 1636 aa7.79□□□□□ -1.16
SMAD5-211ENST00000545279 IRX6P78412 446 aaPredicted RBP7.79□□□□□ -1.16
SMAD5-211ENST00000545279 ARHGAP31Q2M1Z3 1444 aa7.79□□□□□ -1.16
SMAD5-211ENST00000545279 HOXB7P09629 217 aa7.79□□□□□ -1.16
SMAD5-211ENST00000545279 TPD52L1Q16890 204 aaPredicted RBP7.79□□□□□ -1.16
SMAD5-211ENST00000545279 C2orf69Q8N8R5 385 aa7.79□□□□□ -1.16
SMAD5-211ENST00000545279 SIL1Q9H173 461 aa7.79□□□□□ -1.16
SMAD5-211ENST00000545279 AACSQ86V21 672 aa7.79□□□□□ -1.16
SMAD5-211ENST00000545279 GCC1Q96CN9 775 aa7.79□□□□□ -1.16
SMAD5-211ENST00000545279 ANKARQ7Z5J8 1434 aa7.79□□□□□ -1.16
SMAD5-211ENST00000545279 RAB11FIP3O75154 756 aa7.79□□□□□ -1.16
SMAD5-211ENST00000545279 CCDC12Q8WUD4 166 aaPredicted RBP7.79□□□□□ -1.16
SMAD5-211ENST00000545279 BLMP54132 1417 aaPredicted RBP7.78□□□□□ -1.16
SMAD5-211ENST00000545279 IRS4O14654 1257 aaPredicted RBP7.78□□□□□ -1.16
SMAD5-211ENST00000545279 RNMTO43148 476 aaKnown RBP7.78□□□□□ -1.16
SMAD5-211ENST00000545279 NOL7Q9UMY1 257 aaKnown RBP7.78□□□□□ -1.16
SMAD5-211ENST00000545279 SUPT16HQ9Y5B9 1047 aaKnown RBP7.78□□□□□ -1.16
SMAD5-211ENST00000545279 OVOS2A0A0G2JMS6 1433 aa7.78□□□□□ -1.16
SMAD5-211ENST00000545279 OVOS2A0A0J9YW53 1432 aa7.78□□□□□ -1.16
SMAD5-211ENST00000545279 OVOS2Q6IE36 1432 aa7.78□□□□□ -1.16
SMAD5-211ENST00000545279 DESP17661 470 aa7.78□□□□□ -1.16
SMAD5-211ENST00000545279 TMPOP42166 694 aaKnown RBP7.78□□□□□ -1.16
SMAD5-211ENST00000545279 MAP3K9P80192 1104 aa7.78□□□□□ -1.16
SMAD5-211ENST00000545279 DHX37Q8IY37 1157 aaKnown RBP7.78□□□□□ -1.16
SMAD5-211ENST00000545279 TTLL6Q8N841 843 aa7.78□□□□□ -1.16
SMAD5-211ENST00000545279 MAP3K5Q99683 1374 aa7.78□□□□□ -1.16
SMAD5-211ENST00000545279 HSP90AA2PQ14568 343 aaPredicted RBP7.78□□□□□ -1.16
SMAD5-211ENST00000545279 MSL1Q68DK7 614 aa7.78□□□□□ -1.16
SMAD5-211ENST00000545279 BMP2KQ9NSY1 1161 aaPredicted RBP7.78□□□□□ -1.16
SMAD5-211ENST00000545279 MAP3K19Q56UN5 1328 aa7.78□□□□□ -1.16
SMAD5-211ENST00000545279 RTL1A6NKG5 1358 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms