RNA–Protein interactions for RNA: ENST00000544409.5

LRTOMT-221, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 1 (best)

Gene LRTOMT, Length 3,182 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-221ENST00000544409 TSHZ3Q63HK5 1081 aa14.97□□□□□ -0.01
LRTOMT-221ENST00000544409 MPRIPQ6WCQ1 1025 aa14.97□□□□□ -0.01
LRTOMT-221ENST00000544409 DNAAF4Q8WXU2 420 aa14.97□□□□□ -0.01
LRTOMT-221ENST00000544409 ARID3AQ99856 593 aa14.97□□□□□ -0.01
LRTOMT-221ENST00000544409 AOX1Q06278 1338 aa14.97□□□□□ -0.01
LRTOMT-221ENST00000544409 OVOS2A0A0G2JMS6 1433 aa14.97□□□□□ -0.01
LRTOMT-221ENST00000544409 RNMTO43148 476 aaKnown RBP14.97□□□□□ -0.01
LRTOMT-221ENST00000544409 KCNQ3O43525 872 aa14.97□□□□□ -0.01
LRTOMT-221ENST00000544409 RAB11FIP3O75154 756 aa14.97□□□□□ -0.01
LRTOMT-221ENST00000544409 ANKRD24Q8TF21 1146 aa14.97□□□□□ -0.01
LRTOMT-221ENST00000544409 TRPM3Q9HCF6 1732 aaPredicted RBP14.97□□□□□ -0.01
LRTOMT-221ENST00000544409 FGD1P98174 961 aa14.97□□□□□ -0.01
LRTOMT-221ENST00000544409 SKOR2Q2VWA4 1001 aaPredicted RBP14.97□□□□□ -0.01
LRTOMT-221ENST00000544409 KIF1AQ12756 1690 aa14.96□□□□□ -0.01
LRTOMT-221ENST00000544409 TRIM6-TRIM34B2RNG4 842 aa14.96□□□□□ -0.01
LRTOMT-221ENST00000544409 ESYT1Q9BSJ8 1104 aa14.96□□□□□ -0.01
LRTOMT-221ENST00000544409 CAMTA1Q9Y6Y1 1673 aa14.96□□□□□ -0.01
LRTOMT-221ENST00000544409 POLA2Q14181 598 aa14.96□□□□□ -0.01
LRTOMT-221ENST00000544409 PPP1R42Q7Z4L9 355 aa14.96□□□□□ -0.01
LRTOMT-221ENST00000544409 SSFA2P28290 1259 aa14.95□□□□□ -0.02
LRTOMT-221ENST00000544409 BEND3Q5T5X7 828 aa14.95□□□□□ -0.02
LRTOMT-221ENST00000544409 RILPL2Q969X0 211 aa14.95□□□□□ -0.02
LRTOMT-221ENST00000544409 FAM13BQ9NYF5 915 aa14.95□□□□□ -0.02
LRTOMT-221ENST00000544409 PXDNQ92626 1479 aa14.95□□□□□ -0.02
LRTOMT-221ENST00000544409 PI4KAP2A4QPH2 592 aa14.95□□□□□ -0.02
LRTOMT-221ENST00000544409 PI4KAP1Q8N8J0 262 aa14.95□□□□□ -0.02
LRTOMT-221ENST00000544409 GOLGA6L22H0YM25 854 aa14.95□□□□□ -0.02
LRTOMT-221ENST00000544409 MCCP23508 829 aa14.95□□□□□ -0.02
LRTOMT-221ENST00000544409 NUCB2P80303 420 aa14.95□□□□□ -0.02
LRTOMT-221ENST00000544409 KRT28Q7Z3Y7 464 aa14.95□□□□□ -0.02
LRTOMT-221ENST00000544409 PROSER2Q86WR7 435 aaPredicted RBP14.95□□□□□ -0.02
LRTOMT-221ENST00000544409 SURF6O75683 361 aaKnown RBP14.94□□□□□ -0.02
LRTOMT-221ENST00000544409 CLEC17AQ6ZS10 378 aa14.94□□□□□ -0.02
LRTOMT-221ENST00000544409 CWC22Q9HCG8 908 aaKnown RBP14.94□□□□□ -0.02
LRTOMT-221ENST00000544409 DBF4Q9UBU7 674 aaPredicted RBP14.94□□□□□ -0.02
LRTOMT-221ENST00000544409 CHMLP26374 656 aa14.94□□□□□ -0.02
LRTOMT-221ENST00000544409 IL1RAPL2Q9NP60 686 aa14.94□□□□□ -0.02
LRTOMT-221ENST00000544409 SRGAP3O43295 1099 aa14.93□□□□□ -0.02
LRTOMT-221ENST00000544409 AK9Q5TCS8 1911 aa14.93□□□□□ -0.02
LRTOMT-221ENST00000544409 NBPF7P0C2Y1 421 aaPredicted RBP14.93□□□□□ -0.02
LRTOMT-221ENST00000544409 ADCY9O60503 1353 aa14.92□□□□□ -0.02
LRTOMT-221ENST00000544409 ANXA1P04083 346 aa14.92□□□□□ -0.02
LRTOMT-221ENST00000544409 RHPN1Q8TCX5 695 aa14.92□□□□□ -0.02
LRTOMT-221ENST00000544409 KIF1BPQ96EK5 621 aa14.92□□□□□ -0.02
LRTOMT-221ENST00000544409 ISY1Q9ULR0 285 aaKnown RBP14.92□□□□□ -0.02
LRTOMT-221ENST00000544409 C1orf167Q5SNV9 1468 aa14.92□□□□□ -0.02
LRTOMT-221ENST00000544409 HSP90AB4PQ58FF6 505 aa14.92□□□□□ -0.02
LRTOMT-221ENST00000544409 SIPA1L3O60292 1781 aaPredicted RBP14.92□□□□□ -0.02
LRTOMT-221ENST00000544409 NUTM1Q86Y26 1132 aa14.91□□□□□ -0.02
LRTOMT-221ENST00000544409 RGPD5Q99666 1765 aa14.91□□□□□ -0.02
LRTOMT-221ENST00000544409 GIGYF1O75420 1035 aaPredicted RBP14.91□□□□□ -0.02
LRTOMT-221ENST00000544409 BAG4O95429 457 aaKnown RBP14.91□□□□□ -0.02
LRTOMT-221ENST00000544409 ANO2Q9NQ90 1003 aa14.91□□□□□ -0.02
LRTOMT-221ENST00000544409 AXIN2Q9Y2T1 843 aa14.91□□□□□ -0.02
LRTOMT-221ENST00000544409 LMTK3Q96Q04 1460 aa14.91□□□□□ -0.02
LRTOMT-221ENST00000544409 ANAPC15P60006 121 aa14.91□□□□□ -0.02
LRTOMT-221ENST00000544409 MCM2P49736 904 aa14.9□□□□□ -0.02
LRTOMT-221ENST00000544409 C19orf44Q9H6X5 657 aa14.9□□□□□ -0.02
LRTOMT-221ENST00000544409 HEG1Q9ULI3 1381 aa14.9□□□□□ -0.02
LRTOMT-221ENST00000544409 MST1RQ04912 1400 aa14.9□□□□□ -0.02
LRTOMT-221ENST00000544409 ALDH1L1O75891 902 aa14.9□□□□□ -0.02
LRTOMT-221ENST00000544409 NEK4P51957 841 aa14.9□□□□□ -0.02
LRTOMT-221ENST00000544409 GAS2L3Q86XJ1 694 aa14.9□□□□□ -0.02
LRTOMT-221ENST00000544409 UNC5CLQ8IV45 518 aa14.9□□□□□ -0.02
LRTOMT-221ENST00000544409 HDAC5Q9UQL6 1122 aa14.89□□□□□ -0.03
LRTOMT-221ENST00000544409 ALS2Q96Q42 1657 aa14.89□□□□□ -0.03
LRTOMT-221ENST00000544409 ADAMTS7Q9UKP4 1686 aa14.89□□□□□ -0.03
LRTOMT-221ENST00000544409 CYP2E1P05181 493 aaPredicted RBP14.89□□□□□ -0.03
LRTOMT-221ENST00000544409 KSR2Q6VAB6 950 aa14.89□□□□□ -0.03
LRTOMT-221ENST00000544409 ZHX1Q9UKY1 873 aaPredicted RBP14.89□□□□□ -0.03
LRTOMT-221ENST00000544409 MAP3K2Q9Y2U5 619 aa14.89□□□□□ -0.03
LRTOMT-221ENST00000544409 EPB41L2O43491 1005 aaKnown RBP14.89□□□□□ -0.03
LRTOMT-221ENST00000544409 ERBB3P21860 1342 aa14.88□□□□□ -0.03
LRTOMT-221ENST00000544409 HYPKQ9NX55 129 aa14.88□□□□□ -0.03
LRTOMT-221ENST00000544409 C9orf78Q9NZ63 289 aaPredicted RBP14.88□□□□□ -0.03
LRTOMT-221ENST00000544409 OS9Q13438 667 aaPredicted RBP14.88□□□□□ -0.03
LRTOMT-221ENST00000544409 ZGPATQ8N5A5 531 aaKnown RBP14.88□□□□□ -0.03
LRTOMT-221ENST00000544409 PI4K2BQ8TCG2 481 aa14.88□□□□□ -0.03
LRTOMT-221ENST00000544409 MTX1Q13505 466 aa14.87□□□□□ -0.03
LRTOMT-221ENST00000544409 PRDM10Q9NQV6 1147 aa14.87□□□□□ -0.03
LRTOMT-221ENST00000544409 ZC3H6P61129 1189 aaKnown RBP14.87□□□□□ -0.03
LRTOMT-221ENST00000544409 PROSER3Q2NL68 480 aa14.87□□□□□ -0.03
LRTOMT-221ENST00000544409 CNTROBQ8N137 903 aa14.87□□□□□ -0.03
LRTOMT-221ENST00000544409 RAPGEF4Q8WZA2 1011 aa14.87□□□□□ -0.03
LRTOMT-221ENST00000544409 PALD1Q9ULE6 856 aa14.87□□□□□ -0.03
LRTOMT-221ENST00000544409 DDX58O95786 925 aaKnown RBP14.86□□□□□ -0.03
LRTOMT-221ENST00000544409 IL17RAQ96F46 866 aa14.86□□□□□ -0.03
LRTOMT-221ENST00000544409 TMX3Q96JJ7 454 aa14.86□□□□□ -0.03
LRTOMT-221ENST00000544409 MCTP1Q6DN14 999 aa14.86□□□□□ -0.03
LRTOMT-221ENST00000544409 R3HCC1Q9Y3T6 440 aaKnown RBP14.86□□□□□ -0.03
LRTOMT-221ENST00000544409 PRAMEF22A3QJZ6 481 aa14.85□□□□□ -0.03
LRTOMT-221ENST00000544409 KLHL40Q2TBA0 621 aa14.85□□□□□ -0.03
LRTOMT-221ENST00000544409 DDX49Q9Y6V7 483 aaKnown RBP14.85□□□□□ -0.03
LRTOMT-221ENST00000544409 MAP4K4O95819 1239 aaPredicted RBP14.85□□□□□ -0.03
LRTOMT-221ENST00000544409 ATF3P18847 181 aa14.85□□□□□ -0.03
LRTOMT-221ENST00000544409 DDX21Q9NR30 783 aaKnown RBP eCLIP14.85□□□□□ -0.03
LRTOMT-221ENST00000544409 TTC41PQ6P2S7 1318 aa14.85□□□□□ -0.03
LRTOMT-221ENST00000544409 USP42Q9H9J4 1324 aaKnown RBP14.85□□□□□ -0.03
LRTOMT-221ENST00000544409 SCN11AQ9UI33 1791 aa14.85□□□□□ -0.03
LRTOMT-221ENST00000544409 PDE4CQ08493 712 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms