RNA–Protein interactions for RNA: ENST00000544128.5

SP140-214, Transcript of SP140 nuclear body protein, humanhuman

TSL 3

Gene SP140, Length 910 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-214ENST00000544128 PRIM1P49642 420 aaKnown RBP12.3□□□□□ -0.44
SP140-214ENST00000544128 EXOSC9Q06265 439 aaKnown RBP12.3□□□□□ -0.44
SP140-214ENST00000544128 SYTL4Q96C24 671 aaPredicted RBP12.3□□□□□ -0.44
SP140-214ENST00000544128 TMOD3Q9NYL9 352 aa12.3□□□□□ -0.44
SP140-214ENST00000544128 NUP188Q5SRE5 1749 aa12.3□□□□□ -0.44
SP140-214ENST00000544128 RREB1Q92766 1687 aa12.29□□□□□ -0.44
SP140-214ENST00000544128 MRC1P22897 1456 aa12.29□□□□□ -0.44
SP140-214ENST00000544128 DOT1LQ8TEK3 1739 aa12.29□□□□□ -0.44
SP140-214ENST00000544128 KCNQ3O43525 872 aa12.29□□□□□ -0.44
SP140-214ENST00000544128 TRIM37O94972 964 aa12.29□□□□□ -0.44
SP140-214ENST00000544128 SLC39A6Q13433 755 aa12.29□□□□□ -0.44
SP140-214ENST00000544128 BABAM1Q9NWV8 329 aa12.29□□□□□ -0.44
SP140-214ENST00000544128 ITGB4P16144 1822 aa12.29□□□□□ -0.44
SP140-214ENST00000544128 APBA3O96018 575 aa12.28□□□□□ -0.44
SP140-214ENST00000544128 PIGBQ92521 554 aa12.28□□□□□ -0.44
SP140-214ENST00000544128 TULP1O00294 542 aaPredicted RBP12.27□□□□□ -0.45
SP140-214ENST00000544128 ELL2O00472 640 aaPredicted RBP12.27□□□□□ -0.45
SP140-214ENST00000544128 KDM3BQ7LBC6 1761 aa12.27□□□□□ -0.45
SP140-214ENST00000544128 EIF4A1P60842 406 aaKnown RBP12.26□□□□□ -0.45
SP140-214ENST00000544128 KRT24Q2M2I5 525 aa12.26□□□□□ -0.45
SP140-214ENST00000544128 NBPF14Q5TI25 921 aa12.26□□□□□ -0.45
SP140-214ENST00000544128 ZNF790Q6PG37 636 aa12.26□□□□□ -0.45
SP140-214ENST00000544128 FAM196AQ6ZSG2 479 aa12.26□□□□□ -0.45
SP140-214ENST00000544128 TTC5Q8N0Z6 440 aa12.26□□□□□ -0.45
SP140-214ENST00000544128 C8orf58Q8NAV2 365 aa12.26□□□□□ -0.45
SP140-214ENST00000544128 BCL9O00512 1426 aa12.26□□□□□ -0.45
SP140-214ENST00000544128 TSPYL6Q8N831 410 aa12.25□□□□□ -0.45
SP140-214ENST00000544128 ASAP1Q9ULH1 1129 aa12.25□□□□□ -0.45
SP140-214ENST00000544128 GTF3C3Q9Y5Q9 886 aa12.25□□□□□ -0.45
SP140-214ENST00000544128 TWISTNBQ3B726 338 aaPredicted RBP12.24□□□□□ -0.45
SP140-214ENST00000544128 ERICH6Q7L0X2 663 aa12.24□□□□□ -0.45
SP140-214ENST00000544128 PTF1AQ7RTS3 328 aa12.24□□□□□ -0.45
SP140-214ENST00000544128 ZNF496Q96IT1 587 aaPredicted RBP12.24□□□□□ -0.45
SP140-214ENST00000544128 ATG3Q9NT62 314 aa12.24□□□□□ -0.45
SP140-214ENST00000544128 SBF2Q86WG5 1849 aa12.23□□□□□ -0.45
SP140-214ENST00000544128 PTCD1O75127 700 aaKnown RBP12.23□□□□□ -0.45
SP140-214ENST00000544128 FMNL2Q96PY5 1086 aa12.23□□□□□ -0.45
SP140-214ENST00000544128 NHSQ6T4R5 1651 aa12.22□□□□□ -0.45
SP140-214ENST00000544128 PAPPAQ13219 1627 aa12.22□□□□□ -0.45
SP140-214ENST00000544128 VAMP4O75379 141 aa12.22□□□□□ -0.45
SP140-214ENST00000544128 RBM42Q9BTD8 480 aaKnown RBP12.22□□□□□ -0.45
SP140-214ENST00000544128 RCAN3Q9UKA8 241 aa12.22□□□□□ -0.45
SP140-214ENST00000544128 GIGYF1O75420 1035 aaPredicted RBP12.21□□□□□ -0.45
SP140-214ENST00000544128 CT47B1P0C2W7 299 aaPredicted RBP12.21□□□□□ -0.45
SP140-214ENST00000544128 SMARCC1Q92922 1105 aaPredicted RBP12.21□□□□□ -0.45
SP140-214ENST00000544128 BCL11BQ9C0K0 894 aaPredicted RBP12.21□□□□□ -0.45
SP140-214ENST00000544128 HEG1Q9ULI3 1381 aa12.2□□□□□ -0.46
SP140-214ENST00000544128 PRAMEF22A3QJZ6 481 aa12.2□□□□□ -0.46
SP140-214ENST00000544128 TCERG1O14776 1098 aaKnown RBP12.2□□□□□ -0.46
SP140-214ENST00000544128 SNRPA1P09661 255 aaKnown RBP12.2□□□□□ -0.46
SP140-214ENST00000544128 NECTIN2Q92692 538 aa12.2□□□□□ -0.46
SP140-214ENST00000544128 KCPQ6ZWJ8 1503 aa12.2□□□□□ -0.46
SP140-214ENST00000544128 BTAF1O14981 1849 aa12.2□□□□□ -0.46
SP140-214ENST00000544128 UBR2Q8IWV8 1755 aa12.2□□□□□ -0.46
SP140-214ENST00000544128 EIF2S2P20042 333 aaKnown RBP12.19□□□□□ -0.46
SP140-214ENST00000544128 RARSP54136 660 aaKnown RBP12.19□□□□□ -0.46
SP140-214ENST00000544128 PALLDQ8WX93 1383 aa12.18□□□□□ -0.46
SP140-214ENST00000544128 CASZ1Q86V15 1759 aa12.18□□□□□ -0.46
SP140-214ENST00000544128 SOS1Q07889 1333 aaPredicted RBP12.18□□□□□ -0.46
SP140-214ENST00000544128 BCAR3O75815 825 aa12.18□□□□□ -0.46
SP140-214ENST00000544128 HOXB7P09629 217 aa12.18□□□□□ -0.46
SP140-214ENST00000544128 GSE1Q14687 1217 aa12.18□□□□□ -0.46
SP140-214ENST00000544128 HDGFL1Q5TGJ6 251 aa12.18□□□□□ -0.46
SP140-214ENST00000544128 SSH1Q8WYL5 1049 aa12.18□□□□□ -0.46
SP140-214ENST00000544128 BCL2L13Q9BXK5 485 aa12.18□□□□□ -0.46
SP140-214ENST00000544128 USP16Q9Y5T5 823 aa12.18□□□□□ -0.46
SP140-214ENST00000544128 C5P01031 1676 aa12.18□□□□□ -0.46
SP140-214ENST00000544128 ALDH1L2Q3SY69 923 aa12.17□□□□□ -0.46
SP140-214ENST00000544128 CCDC30Q5VVM6 783 aa12.17□□□□□ -0.46
SP140-214ENST00000544128 DNAJC10Q8IXB1 793 aa12.17□□□□□ -0.46
SP140-214ENST00000544128 ZNF428Q96B54 188 aa12.17□□□□□ -0.46
SP140-214ENST00000544128 SLC4A9Q96Q91 983 aa12.17□□□□□ -0.46
SP140-214ENST00000544128 PDGFDQ9GZP0 370 aaPredicted RBP12.17□□□□□ -0.46
SP140-214ENST00000544128 SMC4Q9NTJ3 1288 aa12.17□□□□□ -0.46
SP140-214ENST00000544128 SUPT16HQ9Y5B9 1047 aaKnown RBP12.17□□□□□ -0.46
SP140-214ENST00000544128 GOLGB1Q14789 3259 aaKnown RBP12.17□□□□□ -0.46
SP140-214ENST00000544128 LOC102724428A0A0B4J2F2 783 aa12.16□□□□□ -0.46
SP140-214ENST00000544128 ATP6V1AP38606 617 aa12.16□□□□□ -0.46
SP140-214ENST00000544128 SIK1P57059 783 aa12.16□□□□□ -0.46
SP140-214ENST00000544128 MRPL50Q8N5N7 158 aaKnown RBP12.16□□□□□ -0.46
SP140-214ENST00000544128 SYT17Q9BSW7 474 aa12.16□□□□□ -0.46
SP140-214ENST00000544128 STK31Q9BXU1 1019 aa12.16□□□□□ -0.46
SP140-214ENST00000544128 TEX13AQ9BXU3 409 aaPredicted RBP12.16□□□□□ -0.46
SP140-214ENST00000544128 CHMP4AQ9BY43 222 aa12.16□□□□□ -0.46
SP140-214ENST00000544128 ZBTB7AO95365 584 aa12.15□□□□□ -0.46
SP140-214ENST00000544128 RNF25Q96BH1 459 aaPredicted RBP12.15□□□□□ -0.46
SP140-214ENST00000544128 FHDC1Q9C0D6 1143 aaPredicted RBP12.15□□□□□ -0.46
SP140-214ENST00000544128 STARD3NLO95772 234 aa12.14□□□□□ -0.47
SP140-214ENST00000544128 ANXA1P04083 346 aa12.14□□□□□ -0.47
SP140-214ENST00000544128 A1BGP04217 495 aa12.14□□□□□ -0.47
SP140-214ENST00000544128 PTGER2P43116 358 aa12.14□□□□□ -0.47
SP140-214ENST00000544128 KCNQ4P56696 695 aa12.14□□□□□ -0.47
SP140-214ENST00000544128 ITPK1Q13572 414 aa12.14□□□□□ -0.47
SP140-214ENST00000544128 FRAT1Q92837 279 aaPredicted RBP12.14□□□□□ -0.47
SP140-214ENST00000544128 CHPF2Q9P2E5 772 aa12.14□□□□□ -0.47
SP140-214ENST00000544128 LAMB4A4D0S4 1761 aa12.14□□□□□ -0.47
SP140-214ENST00000544128 TJP1Q07157 1748 aa12.14□□□□□ -0.47
SP140-214ENST00000544128 PLIN1O60240 522 aa12.13□□□□□ -0.47
SP140-214ENST00000544128 CYP19A1P11511 503 aaPredicted RBP12.13□□□□□ -0.47
SP140-214ENST00000544128 PIP4K2AP48426 406 aaPredicted RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms