RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 JCADQ9P266 1359 aa24.9■■□□□ 1.58
COPS7A-218ENST00000543939 ITGB4P16144 1822 aa24.89■■□□□ 1.58
COPS7A-218ENST00000543939 DNAAF4Q8WXU2 420 aa24.89■■□□□ 1.58
COPS7A-218ENST00000543939 KCPQ6ZWJ8 1503 aa24.89■■□□□ 1.58
COPS7A-218ENST00000543939 PI4KAP2A4QPH2 592 aa24.89■■□□□ 1.57
COPS7A-218ENST00000543939 CEP85Q6P2H3 762 aa24.89■■□□□ 1.57
COPS7A-218ENST00000543939 PI4KAP1Q8N8J0 262 aa24.89■■□□□ 1.57
COPS7A-218ENST00000543939 THRAP3Q9Y2W1 955 aaKnown RBP24.89■■□□□ 1.57
COPS7A-218ENST00000543939 LRP6O75581 1613 aa24.88■■□□□ 1.57
COPS7A-218ENST00000543939 NUCB1Q02818 461 aa24.88■■□□□ 1.57
COPS7A-218ENST00000543939 TNS2Q63HR2 1409 aa24.88■■□□□ 1.57
COPS7A-218ENST00000543939 CDCA7Q9BWT1 371 aaPredicted RBP24.88■■□□□ 1.57
COPS7A-218ENST00000543939 GNAI3P08754 354 aa24.87■■□□□ 1.57
COPS7A-218ENST00000543939 USP16Q9Y5T5 823 aa24.87■■□□□ 1.57
COPS7A-218ENST00000543939 EXOC5O00471 708 aa24.86■■□□□ 1.57
COPS7A-218ENST00000543939 BEND3Q5T5X7 828 aa24.86■■□□□ 1.57
COPS7A-218ENST00000543939 SRCIN1Q9C0H9 1055 aa24.86■■□□□ 1.57
COPS7A-218ENST00000543939 SPATA31A5Q5VU36 1347 aa24.85■■□□□ 1.57
COPS7A-218ENST00000543939 SPATA31A7Q8IWB4 1347 aa24.85■■□□□ 1.57
COPS7A-218ENST00000543939 GNAI2P04899 355 aa24.85■■□□□ 1.57
COPS7A-218ENST00000543939 FAM161AQ3B820 660 aa24.85■■□□□ 1.57
COPS7A-218ENST00000543939 KSR2Q6VAB6 950 aa24.85■■□□□ 1.57
COPS7A-218ENST00000543939 USP44Q9H0E7 712 aa24.85■■□□□ 1.57
COPS7A-218ENST00000543939 DCTPP1Q9H773 170 aa24.84■■□□□ 1.57
COPS7A-218ENST00000543939 TMOD3Q9NYL9 352 aa24.84■■□□□ 1.57
COPS7A-218ENST00000543939 C8orf34Q49A92 452 aa24.83■■□□□ 1.57
COPS7A-218ENST00000543939 LRP10Q7Z4F1 713 aa24.83■■□□□ 1.57
COPS7A-218ENST00000543939 CHD1LQ86WJ1 897 aa24.83■■□□□ 1.57
COPS7A-218ENST00000543939 MAP3K2Q9Y2U5 619 aa24.83■■□□□ 1.57
COPS7A-218ENST00000543939 DDX58O95786 925 aaKnown RBP24.81■■□□□ 1.56
COPS7A-218ENST00000543939 ERBB4Q15303 1308 aa24.8■■□□□ 1.56
COPS7A-218ENST00000543939 MYL6BP14649 208 aa24.8■■□□□ 1.56
COPS7A-218ENST00000543939 ANKRD45Q5TZF3 282 aa24.8■■□□□ 1.56
COPS7A-218ENST00000543939 BARGINQ6ZT62 677 aa24.8■■□□□ 1.56
COPS7A-218ENST00000543939 PIGBQ92521 554 aa24.8■■□□□ 1.56
COPS7A-218ENST00000543939 ALDH1L1O75891 902 aa24.79■■□□□ 1.56
COPS7A-218ENST00000543939 UNC5CLQ8IV45 518 aa24.79■■□□□ 1.56
COPS7A-218ENST00000543939 LNPKQ9C0E8 428 aa24.79■■□□□ 1.56
COPS7A-218ENST00000543939 SPATA31A6Q5VVP1 1343 aa24.79■■□□□ 1.56
COPS7A-218ENST00000543939 HMMRO75330 724 aa24.78■■□□□ 1.56
COPS7A-218ENST00000543939 UBTFL1P0CB47 393 aaPredicted RBP24.78■■□□□ 1.56
COPS7A-218ENST00000543939 AIMP1Q12904 312 aaKnown RBP24.78■■□□□ 1.56
COPS7A-218ENST00000543939 XAGE3Q8WTP9 111 aa24.78■■□□□ 1.56
COPS7A-218ENST00000543939 LRRFIP2Q9Y608 721 aaKnown RBP24.78■■□□□ 1.56
COPS7A-218ENST00000543939 DOT1LQ8TEK3 1739 aa24.78■■□□□ 1.56
COPS7A-218ENST00000543939 BCL9O00512 1426 aa24.77■■□□□ 1.56
COPS7A-218ENST00000543939 BCL9LQ86UU0 1499 aa24.77■■□□□ 1.56
COPS7A-218ENST00000543939 PTCD1O75127 700 aaKnown RBP24.77■■□□□ 1.56
COPS7A-218ENST00000543939 DDB1Q16531 1140 aa24.77■■□□□ 1.56
COPS7A-218ENST00000543939 COPS6Q7L5N1 327 aa24.77■■□□□ 1.56
COPS7A-218ENST00000543939 KAT6BQ8WYB5 2073 aa24.77■■□□□ 1.56
COPS7A-218ENST00000543939 ATP8B2P98198 1209 aa24.76■■□□□ 1.55
COPS7A-218ENST00000543939 C8orf37Q96NL8 207 aa24.76■■□□□ 1.55
COPS7A-218ENST00000543939 LINS1Q8NG48 757 aa24.75■■□□□ 1.55
COPS7A-218ENST00000543939 NGLY1Q96IV0 654 aa24.75■■□□□ 1.55
COPS7A-218ENST00000543939 ATG3Q9NT62 314 aa24.75■■□□□ 1.55
COPS7A-218ENST00000543939 ASAP1Q9ULH1 1129 aa24.75■■□□□ 1.55
COPS7A-218ENST00000543939 CCDC9Q9Y3X0 531 aaKnown RBP24.75■■□□□ 1.55
COPS7A-218ENST00000543939 IBTKQ9P2D0 1353 aaPredicted RBP24.74■■□□□ 1.55
COPS7A-218ENST00000543939 ARFGEF2Q9Y6D5 1785 aa24.74■■□□□ 1.55
COPS7A-218ENST00000543939 NBPF26B4DH59 902 aa24.74■■□□□ 1.55
COPS7A-218ENST00000543939 PIP4K2AP48426 406 aaPredicted RBP24.74■■□□□ 1.55
COPS7A-218ENST00000543939 NBPF14Q5TI25 921 aa24.74■■□□□ 1.55
COPS7A-218ENST00000543939 NBPF10Q6P3W6 841 aaKnown RBP24.74■■□□□ 1.55
COPS7A-218ENST00000543939 RIC3Q7Z5B4 369 aa24.74■■□□□ 1.55
COPS7A-218ENST00000543939 FNBP4Q8N3X1 1017 aaPredicted RBP24.74■■□□□ 1.55
COPS7A-218ENST00000543939 NBPF15Q8N660 670 aa24.74■■□□□ 1.55
COPS7A-218ENST00000543939 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.73■■□□□ 1.55
COPS7A-218ENST00000543939 NBPF7P0C2Y1 421 aaPredicted RBP24.73■■□□□ 1.55
COPS7A-218ENST00000543939 VPS72Q15906 364 aa24.73■■□□□ 1.55
COPS7A-218ENST00000543939 ANKRD13DQ6ZTN6 518 aa24.72■■□□□ 1.55
COPS7A-218ENST00000543939 VSIG10Q8N0Z9 540 aa24.72■■□□□ 1.55
COPS7A-218ENST00000543939 PNMA6EA0A0J9YXQ4 647 aa24.72■■□□□ 1.55
COPS7A-218ENST00000543939 METTL22Q9BUU2 404 aaPredicted RBP24.72■■□□□ 1.55
COPS7A-218ENST00000543939 CWF19L2Q2TBE0 894 aaKnown RBP24.71■■□□□ 1.55
COPS7A-218ENST00000543939 MARCH10Q8NA82 808 aaPredicted RBP24.7■■□□□ 1.54
COPS7A-218ENST00000543939 A1BGP04217 495 aa24.69■■□□□ 1.54
COPS7A-218ENST00000543939 IGKV5-2P06315 115 aa24.69■■□□□ 1.54
COPS7A-218ENST00000543939 TEX13AQ9BXU3 409 aaPredicted RBP24.69■■□□□ 1.54
COPS7A-218ENST00000543939 UTYO14607 1347 aa24.69■■□□□ 1.54
COPS7A-218ENST00000543939 NUP188Q5SRE5 1749 aa24.69■■□□□ 1.54
COPS7A-218ENST00000543939 PRIM1P49642 420 aaKnown RBP24.69■■□□□ 1.54
COPS7A-218ENST00000543939 SSH3Q8TE77 659 aa24.69■■□□□ 1.54
COPS7A-218ENST00000543939 AFDNP55196 1824 aaKnown RBP24.68■■□□□ 1.54
COPS7A-218ENST00000543939 HSPA1LP34931 641 aa24.68■■□□□ 1.54
COPS7A-218ENST00000543939 NEXNQ0ZGT2 675 aa24.68■■□□□ 1.54
COPS7A-218ENST00000543939 PLBD2Q8NHP8 589 aa24.68■■□□□ 1.54
COPS7A-218ENST00000543939 C9orf78Q9NZ63 289 aaPredicted RBP24.68■■□□□ 1.54
COPS7A-218ENST00000543939 NEURL1BA8MQ27 555 aa24.66■■□□□ 1.54
COPS7A-218ENST00000543939 GRM8O00222 908 aa24.66■■□□□ 1.54
COPS7A-218ENST00000543939 POLA2Q14181 598 aa24.66■■□□□ 1.54
COPS7A-218ENST00000543939 DNAJC10Q8IXB1 793 aa24.66■■□□□ 1.54
COPS7A-218ENST00000543939 HDAC5Q9UQL6 1122 aa24.66■■□□□ 1.54
COPS7A-218ENST00000543939 PPP1R42Q7Z4L9 355 aa24.66■■□□□ 1.54
COPS7A-218ENST00000543939 SYTL4Q96C24 671 aaPredicted RBP24.66■■□□□ 1.54
COPS7A-218ENST00000543939 MYD88Q99836 296 aa24.66■■□□□ 1.54
COPS7A-218ENST00000543939 RBM42Q9BTD8 480 aaKnown RBP24.66■■□□□ 1.54
COPS7A-218ENST00000543939 ZBTB47Q9UFB7 747 aaPredicted RBP24.66■■□□□ 1.54
COPS7A-218ENST00000543939 FAM98CQ17RN3 349 aaKnown RBP24.65■■□□□ 1.54
COPS7A-218ENST00000543939 MTX1Q13505 466 aa24.64■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 193.5 ms