RNA–Protein interactions for RNA: ENST00000543886.5

PTPRO-209, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-209ENST00000543886 WDR17Q8IZU2 1322 aa21.11■□□□□ 0.97
PTPRO-209ENST00000543886 CYP27B1O15528 508 aa21.1■□□□□ 0.97
PTPRO-209ENST00000543886 SLC39A6Q13433 755 aa21.1■□□□□ 0.97
PTPRO-209ENST00000543886 PROSER3Q2NL68 480 aa21.1■□□□□ 0.97
PTPRO-209ENST00000543886 TBC1D2Q9BYX2 928 aa21.1■□□□□ 0.97
PTPRO-209ENST00000543886 C5P01031 1676 aa21.1■□□□□ 0.97
PTPRO-209ENST00000543886 IBTKQ9P2D0 1353 aaPredicted RBP21.1■□□□□ 0.97
PTPRO-209ENST00000543886 TOM1L2Q6ZVM7 507 aa21.09■□□□□ 0.97
PTPRO-209ENST00000543886 USP35Q9P2H5 1018 aa21.09■□□□□ 0.97
PTPRO-209ENST00000543886 MAP3K2Q9Y2U5 619 aa21.09■□□□□ 0.97
PTPRO-209ENST00000543886 KSR2Q6VAB6 950 aa21.09■□□□□ 0.97
PTPRO-209ENST00000543886 DDX21Q9NR30 783 aaKnown RBP eCLIP21.09■□□□□ 0.97
PTPRO-209ENST00000543886 NHSL1Q5SYE7 1610 aa21.09■□□□□ 0.97
PTPRO-209ENST00000543886 DDX58O95786 925 aaKnown RBP21.08■□□□□ 0.97
PTPRO-209ENST00000543886 TTC5Q8N0Z6 440 aa21.08■□□□□ 0.97
PTPRO-209ENST00000543886 COL5A2P05997 1499 aaPredicted RBP21.08■□□□□ 0.97
PTPRO-209ENST00000543886 CASC1Q6TDU7 716 aa21.08■□□□□ 0.96
PTPRO-209ENST00000543886 ALDH1L1O75891 902 aa21.07■□□□□ 0.96
PTPRO-209ENST00000543886 SSH3Q8TE77 659 aa21.07■□□□□ 0.96
PTPRO-209ENST00000543886 NBPF7P0C2Y1 421 aaPredicted RBP21.06■□□□□ 0.96
PTPRO-209ENST00000543886 SDSP20132 328 aa21.06■□□□□ 0.96
PTPRO-209ENST00000543886 OSBPL3Q9H4L5 887 aa21.06■□□□□ 0.96
PTPRO-209ENST00000543886 PDE1AP54750 535 aa21.06■□□□□ 0.96
PTPRO-209ENST00000543886 CABP4P57796 275 aa21.06■□□□□ 0.96
PTPRO-209ENST00000543886 PPP1R42Q7Z4L9 355 aa21.06■□□□□ 0.96
PTPRO-209ENST00000543886 PCDH11XQ9BZA7 1347 aa21.05■□□□□ 0.96
PTPRO-209ENST00000543886 PCDH11YQ9BZA8 1340 aa21.05■□□□□ 0.96
PTPRO-209ENST00000543886 POLA2Q14181 598 aa21.05■□□□□ 0.96
PTPRO-209ENST00000543886 SRGAP3O43295 1099 aa21.04■□□□□ 0.96
PTPRO-209ENST00000543886 HSCBQ8IWL3 235 aa21.04■□□□□ 0.96
PTPRO-209ENST00000543886 ZNF496Q96IT1 587 aaPredicted RBP21.04■□□□□ 0.96
PTPRO-209ENST00000543886 C9orf78Q9NZ63 289 aaPredicted RBP21.04■□□□□ 0.96
PTPRO-209ENST00000543886 HDAC5Q9UQL6 1122 aa21.04■□□□□ 0.96
PTPRO-209ENST00000543886 RAB11FIP3O75154 756 aa21.03■□□□□ 0.96
PTPRO-209ENST00000543886 SNRPA1P09661 255 aaKnown RBP21.03■□□□□ 0.96
PTPRO-209ENST00000543886 PDIA6Q15084 440 aa21.03■□□□□ 0.96
PTPRO-209ENST00000543886 ZCRB1Q8TBF4 217 aaKnown RBP21.03■□□□□ 0.96
PTPRO-209ENST00000543886 FMNL2Q96PY5 1086 aa21.03■□□□□ 0.96
PTPRO-209ENST00000543886 MX1P20591 662 aa21.03■□□□□ 0.96
PTPRO-209ENST00000543886 AIMP1Q12904 312 aaKnown RBP21.03■□□□□ 0.96
PTPRO-209ENST00000543886 SLKQ9H2G2 1235 aaPredicted RBP21.03■□□□□ 0.96
PTPRO-209ENST00000543886 SURF6O75683 361 aaKnown RBP21.02■□□□□ 0.96
PTPRO-209ENST00000543886 NFKBIBQ15653 356 aa21.02■□□□□ 0.96
PTPRO-209ENST00000543886 LINS1Q8NG48 757 aa21.01■□□□□ 0.95
PTPRO-209ENST00000543886 CARD10Q9BWT7 1032 aa21.01■□□□□ 0.95
PTPRO-209ENST00000543886 SALL3Q9BXA9 1300 aa21.01■□□□□ 0.95
PTPRO-209ENST00000543886 EVA1CP58658 441 aa21.01■□□□□ 0.95
PTPRO-209ENST00000543886 MYL6BP14649 208 aa21■□□□□ 0.95
PTPRO-209ENST00000543886 IL2RBP14784 551 aa21■□□□□ 0.95
PTPRO-209ENST00000543886 RIC3Q7Z5B4 369 aa21■□□□□ 0.95
PTPRO-209ENST00000543886 STRN4Q9NRL3 753 aa21■□□□□ 0.95
PTPRO-209ENST00000543886 CWF19L2Q2TBE0 894 aaKnown RBP21■□□□□ 0.95
PTPRO-209ENST00000543886 HSP90AB4PQ58FF6 505 aa20.99■□□□□ 0.95
PTPRO-209ENST00000543886 LAMB4A4D0S4 1761 aa20.99■□□□□ 0.95
PTPRO-209ENST00000543886 LARP1Q6PKG0 1096 aaKnown RBP20.98■□□□□ 0.95
PTPRO-209ENST00000543886 SNX21Q969T3 373 aa20.98■□□□□ 0.95
PTPRO-209ENST00000543886 TUBGCP6Q96RT7 1819 aa20.98■□□□□ 0.95
PTPRO-209ENST00000543886 NEXNQ0ZGT2 675 aa20.98■□□□□ 0.95
PTPRO-209ENST00000543886 TSHZ3Q63HK5 1081 aa20.98■□□□□ 0.95
PTPRO-209ENST00000543886 XAGE3Q8WTP9 111 aa20.98■□□□□ 0.95
PTPRO-209ENST00000543886 KIF1BPQ96EK5 621 aa20.98■□□□□ 0.95
PTPRO-209ENST00000543886 STAP2Q9UGK3 403 aa20.98■□□□□ 0.95
PTPRO-209ENST00000543886 AOX1Q06278 1338 aa20.97■□□□□ 0.95
PTPRO-209ENST00000543886 GRM8O00222 908 aa20.97■□□□□ 0.95
PTPRO-209ENST00000543886 MTX1Q13505 466 aa20.97■□□□□ 0.95
PTPRO-209ENST00000543886 ANTXR1Q9H6X2 564 aa20.97■□□□□ 0.95
PTPRO-209ENST00000543886 IL1RAPL2Q9NP60 686 aa20.97■□□□□ 0.95
PTPRO-209ENST00000543886 RHPN1Q8TCX5 695 aa20.97■□□□□ 0.95
PTPRO-209ENST00000543886 KIF2CQ99661 725 aa20.97■□□□□ 0.95
PTPRO-209ENST00000543886 USP16Q9Y5T5 823 aa20.97■□□□□ 0.95
PTPRO-209ENST00000543886 ERVV-2B6SEH9 535 aa20.96■□□□□ 0.95
PTPRO-209ENST00000543886 REC8O95072 547 aa20.96■□□□□ 0.95
PTPRO-209ENST00000543886 COPS6Q7L5N1 327 aa20.96■□□□□ 0.95
PTPRO-209ENST00000543886 UTYO14607 1347 aa20.95■□□□□ 0.94
PTPRO-209ENST00000543886 OS9Q13438 667 aaPredicted RBP20.95■□□□□ 0.94
PTPRO-209ENST00000543886 SPRYD3Q8NCJ5 442 aa20.95■□□□□ 0.94
PTPRO-209ENST00000543886 GLI3P10071 1580 aa20.95■□□□□ 0.94
PTPRO-209ENST00000543886 SHANK3Q9BYB0 1731 aa20.95■□□□□ 0.94
PTPRO-209ENST00000543886 ERC2O15083 957 aa20.94■□□□□ 0.94
PTPRO-209ENST00000543886 NKX1-1Q15270 411 aaPredicted RBP20.94■□□□□ 0.94
PTPRO-209ENST00000543886 USP26Q9BXU7 913 aa20.94■□□□□ 0.94
PTPRO-209ENST00000543886 TRIM6-TRIM34B2RNG4 842 aa20.93■□□□□ 0.94
PTPRO-209ENST00000543886 DDX54Q8TDD1 881 aaKnown RBP20.93■□□□□ 0.94
PTPRO-209ENST00000543886 NUTM1Q86Y26 1132 aa20.93■□□□□ 0.94
PTPRO-209ENST00000543886 METTL22Q9BUU2 404 aaPredicted RBP20.93■□□□□ 0.94
PTPRO-209ENST00000543886 UBR2Q8IWV8 1755 aa20.93■□□□□ 0.94
PTPRO-209ENST00000543886 IGKV5-2P06315 115 aa20.92■□□□□ 0.94
PTPRO-209ENST00000543886 ANKRD13DQ6ZTN6 518 aa20.92■□□□□ 0.94
PTPRO-209ENST00000543886 MYD88Q99836 296 aa20.92■□□□□ 0.94
PTPRO-209ENST00000543886 PAPPAQ13219 1627 aa20.92■□□□□ 0.94
PTPRO-209ENST00000543886 NEURL1BA8MQ27 555 aa20.92■□□□□ 0.94
PTPRO-209ENST00000543886 LRP10Q7Z4F1 713 aa20.92■□□□□ 0.94
PTPRO-209ENST00000543886 RILPL2Q969X0 211 aa20.92■□□□□ 0.94
PTPRO-209ENST00000543886 SUCLG2Q96I99 432 aa20.92■□□□□ 0.94
PTPRO-209ENST00000543886 FRAT2O75474 233 aaPredicted RBP20.91■□□□□ 0.94
PTPRO-209ENST00000543886 PIP4K2AP48426 406 aaPredicted RBP20.91■□□□□ 0.94
PTPRO-209ENST00000543886 ROBO1Q9Y6N7 1651 aa20.91■□□□□ 0.94
PTPRO-209ENST00000543886 ERC1Q8IUD2 1116 aa20.9■□□□□ 0.94
PTPRO-209ENST00000543886 ERBB4Q15303 1308 aa20.9■□□□□ 0.94
PTPRO-209ENST00000543886 ARFGEF2Q9Y6D5 1785 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms