RNA–Protein interactions for RNA: ENST00000543694.1

LRTM2-206, Transcript of leucine rich repeats and transmembrane domains 2, humanhuman

TSL 4

Gene LRTM2, Length 587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM2-206ENST00000543694 KIF24Q5T7B8 1368 aa20.41■□□□□ 0.86
LRTM2-206ENST00000543694 ZNF831Q5JPB2 1677 aa20.41■□□□□ 0.86
LRTM2-206ENST00000543694 COL5A3P25940 1745 aaPredicted RBP20.41■□□□□ 0.86
LRTM2-206ENST00000543694 CNTNAP1P78357 1384 aa20.39■□□□□ 0.85
LRTM2-206ENST00000543694 IFNL2Q8IZJ0 200 aa20.39■□□□□ 0.85
LRTM2-206ENST00000543694 ABHD8Q96I13 439 aa20.39■□□□□ 0.85
LRTM2-206ENST00000543694 DDR1Q08345 913 aa20.38■□□□□ 0.85
LRTM2-206ENST00000543694 DPY19L2Q6NUT2 758 aa20.38■□□□□ 0.85
LRTM2-206ENST00000543694 PNISRQ8TF01 805 aaKnown RBP20.38■□□□□ 0.85
LRTM2-206ENST00000543694 MLLT1Q03111 559 aaPredicted RBP20.37■□□□□ 0.85
LRTM2-206ENST00000543694 WDR43Q15061 677 aaKnown RBP eCLIP20.37■□□□□ 0.85
LRTM2-206ENST00000543694 CHADLQ6NUI6 762 aa20.37■□□□□ 0.85
LRTM2-206ENST00000543694 PHKG2P15735 406 aa20.36■□□□□ 0.85
LRTM2-206ENST00000543694 FKBP8Q14318 412 aa20.36■□□□□ 0.85
LRTM2-206ENST00000543694 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.36■□□□□ 0.85
LRTM2-206ENST00000543694 NCAPD2Q15021 1401 aa20.36■□□□□ 0.85
LRTM2-206ENST00000543694 USP42Q9H9J4 1324 aaKnown RBP20.35■□□□□ 0.85
LRTM2-206ENST00000543694 LBX1P52954 281 aa20.35■□□□□ 0.85
LRTM2-206ENST00000543694 SLC4A9Q96Q91 983 aa20.35■□□□□ 0.85
LRTM2-206ENST00000543694 SRP68Q9UHB9 627 aaKnown RBP20.35■□□□□ 0.85
LRTM2-206ENST00000543694 CENPBP07199 599 aaPredicted RBP20.34■□□□□ 0.85
LRTM2-206ENST00000543694 MTHFSP49914 203 aa20.34■□□□□ 0.85
LRTM2-206ENST00000543694 NUDCQ9Y266 331 aa20.34■□□□□ 0.85
LRTM2-206ENST00000543694 TNNT2P45379 298 aaPredicted RBP20.33■□□□□ 0.85
LRTM2-206ENST00000543694 FAM9BQ8IZU0 186 aa20.33■□□□□ 0.85
LRTM2-206ENST00000543694 POTECB2RU33 542 aa20.32■□□□□ 0.84
LRTM2-206ENST00000543694 POLRMTO00411 1230 aaKnown RBP20.32■□□□□ 0.84
LRTM2-206ENST00000543694 CCDC184Q52MB2 194 aa20.32■□□□□ 0.84
LRTM2-206ENST00000543694 CCDC88AQ3V6T2 1871 aa20.32■□□□□ 0.84
LRTM2-206ENST00000543694 MYH14Q7Z406 1995 aaKnown RBP20.31■□□□□ 0.84
LRTM2-206ENST00000543694 PPM1GO15355 546 aaPredicted RBP20.3■□□□□ 0.84
LRTM2-206ENST00000543694 TTLL6Q8N841 843 aa20.3■□□□□ 0.84
LRTM2-206ENST00000543694 PNNQ9H307 717 aaKnown RBP20.3■□□□□ 0.84
LRTM2-206ENST00000543694 DLEC1Q9Y238 1755 aa20.3■□□□□ 0.84
LRTM2-206ENST00000543694 CCDC85CA6NKD9 419 aa20.29■□□□□ 0.84
LRTM2-206ENST00000543694 CRKLP46109 303 aaKnown RBP20.29■□□□□ 0.84
LRTM2-206ENST00000543694 VEGFBP49765 207 aa20.29■□□□□ 0.84
LRTM2-206ENST00000543694 WBP1LQ9NX94 342 aa20.29■□□□□ 0.84
LRTM2-206ENST00000543694 EMILIN1Q9Y6C2 1016 aa20.29■□□□□ 0.84
LRTM2-206ENST00000543694 ERVV-2B6SEH9 535 aa20.28■□□□□ 0.84
LRTM2-206ENST00000543694 NFKBIEO00221 500 aa20.28■□□□□ 0.84
LRTM2-206ENST00000543694 NGEFQ8N5V2 710 aa20.28■□□□□ 0.84
LRTM2-206ENST00000543694 POLKQ9UBT6 870 aa20.28■□□□□ 0.84
LRTM2-206ENST00000543694 ZPR1O75312 459 aa20.27■□□□□ 0.84
LRTM2-206ENST00000543694 ERFEQ4G0M1 354 aa20.27■□□□□ 0.84
LRTM2-206ENST00000543694 YTHDC1Q96MU7 727 aaKnown RBP20.27■□□□□ 0.84
LRTM2-206ENST00000543694 COL3A1P02461 1466 aaPredicted RBP20.26■□□□□ 0.83
LRTM2-206ENST00000543694 TMEM88BA6NKF7 163 aa20.26■□□□□ 0.83
LRTM2-206ENST00000543694 DIAPH1O60610 1272 aaKnown RBP20.26■□□□□ 0.83
LRTM2-206ENST00000543694 HSP90AB1P08238 724 aaKnown RBP20.26■□□□□ 0.83
LRTM2-206ENST00000543694 POTEIP0CG38 1075 aa20.26■□□□□ 0.83
LRTM2-206ENST00000543694 POTEJP0CG39 1038 aa20.26■□□□□ 0.83
LRTM2-206ENST00000543694 HSPA8P11142 646 aaKnown RBP20.26■□□□□ 0.83
LRTM2-206ENST00000543694 VIRMAQ69YN4 1812 aaKnown RBP20.25■□□□□ 0.83
LRTM2-206ENST00000543694 PTCD1O75127 700 aaKnown RBP20.25■□□□□ 0.83
LRTM2-206ENST00000543694 TM4SF1P30408 202 aa20.25■□□□□ 0.83
LRTM2-206ENST00000543694 EYA1Q99502 592 aa20.25■□□□□ 0.83
LRTM2-206ENST00000543694 CABP4P57796 275 aa20.24■□□□□ 0.83
LRTM2-206ENST00000543694 C2CD5Q86YS7 1000 aa20.24■□□□□ 0.83
LRTM2-206ENST00000543694 PASKQ96RG2 1323 aa20.24■□□□□ 0.83
LRTM2-206ENST00000543694 AFDNP55196 1824 aaKnown RBP20.23■□□□□ 0.83
LRTM2-206ENST00000543694 IQCA1LA6NCM1 817 aa20.23■□□□□ 0.83
LRTM2-206ENST00000543694 H0YIN7 160 aa20.23■□□□□ 0.83
LRTM2-206ENST00000543694 HNRNPUQ00839 825 aaKnown RBP eCLIP20.23■□□□□ 0.83
LRTM2-206ENST00000543694 USPL1Q5W0Q7 1092 aa20.23■□□□□ 0.83
LRTM2-206ENST00000543694 LDHDQ86WU2 507 aa20.23■□□□□ 0.83
LRTM2-206ENST00000543694 DICER1Q9UPY3 1922 aaKnown RBP20.23■□□□□ 0.83
LRTM2-206ENST00000543694 RGS19P49795 217 aa20.22■□□□□ 0.83
LRTM2-206ENST00000543694 MAP2K1Q02750 393 aaPredicted RBP20.22■□□□□ 0.83
LRTM2-206ENST00000543694 ZBED9Q6R2W3 1325 aa20.22■□□□□ 0.83
LRTM2-206ENST00000543694 CFAP44Q96MT7 982 aa20.21■□□□□ 0.83
LRTM2-206ENST00000543694 TJP1Q07157 1748 aa20.21■□□□□ 0.83
LRTM2-206ENST00000543694 NRXN2Q9P2S2 1712 aa20.2■□□□□ 0.82
LRTM2-206ENST00000543694 DDNO94850 711 aaPredicted RBP20.2■□□□□ 0.82
LRTM2-206ENST00000543694 NCBP3Q53F19 620 aaKnown RBP20.2■□□□□ 0.82
LRTM2-206ENST00000543694 NEFMP07197 916 aa20.19■□□□□ 0.82
LRTM2-206ENST00000543694 NFIXQ14938 502 aa20.19■□□□□ 0.82
LRTM2-206ENST00000543694 ZNF219Q9P2Y4 722 aaPredicted RBP20.19■□□□□ 0.82
LRTM2-206ENST00000543694 ADAMTS8Q9UP79 889 aa20.19■□□□□ 0.82
LRTM2-206ENST00000543694 ADAMTS7Q9UKP4 1686 aa20.19■□□□□ 0.82
LRTM2-206ENST00000543694 SERPINB2P05120 415 aa20.18■□□□□ 0.82
LRTM2-206ENST00000543694 DEFB115Q30KQ5 88 aa20.18■□□□□ 0.82
LRTM2-206ENST00000543694 BEGAINQ9BUH8 593 aa20.18■□□□□ 0.82
LRTM2-206ENST00000543694 TAOK3Q9H2K8 898 aa20.18■□□□□ 0.82
LRTM2-206ENST00000543694 C21orf2O43822 256 aa20.17■□□□□ 0.82
LRTM2-206ENST00000543694 ZNF622Q969S3 477 aaKnown RBP eCLIP20.17■□□□□ 0.82
LRTM2-206ENST00000543694 RASSF10A6NK89 507 aa20.16■□□□□ 0.82
LRTM2-206ENST00000543694 U2AF1L5P0DN76 240 aaPredicted RBP20.16■□□□□ 0.82
LRTM2-206ENST00000543694 U2AF1Q01081 240 aaKnown RBP eCLIP20.16■□□□□ 0.82
LRTM2-206ENST00000543694 EAPPQ56P03 285 aaPredicted RBP20.16■□□□□ 0.82
LRTM2-206ENST00000543694 ZNF530Q6P9A1 599 aaPredicted RBP20.16■□□□□ 0.82
LRTM2-206ENST00000543694 INTS5Q6P9B9 1019 aaKnown RBP20.16■□□□□ 0.82
LRTM2-206ENST00000543694 SCN4AP35499 1836 aa20.16■□□□□ 0.82
LRTM2-206ENST00000543694 FER1L6Q2WGJ9 1857 aa20.16■□□□□ 0.82
LRTM2-206ENST00000543694 PLEKHO1Q53GL0 409 aaPredicted RBP20.15■□□□□ 0.82
LRTM2-206ENST00000543694 RUNDC1Q96C34 613 aa20.15■□□□□ 0.82
LRTM2-206ENST00000543694 TAF1DQ9H5J8 278 aaPredicted RBP20.15■□□□□ 0.82
LRTM2-206ENST00000543694 ABT1Q9ULW3 272 aaKnown RBP20.15■□□□□ 0.82
LRTM2-206ENST00000543694 CLEC11AQ9Y240 323 aa20.15■□□□□ 0.82
LRTM2-206ENST00000543694 SOS1Q07889 1333 aaPredicted RBP20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms